EWM25182.1, cds5491 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25182.1 vs. NCBI_GenBank
Match: gi|585106842|gb|EWM25182.1| (riboflavin kinase [Nannochloropsis gaditana] >gi|585106843|gb|EWM25183.1| riboflavin kinase [Nannochloropsis gaditana]) HSP 1 Score: 748.043 bits (1930), Expect = 0.000e+0 Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0 Query: 1 MDLSAGMLVVARERFPRASFWQGDVLDLPVIYEREGGKEEGLFTAVFFNACFGNVFDQARALREVGKLVKKGGRVVISHPLGADFVEELRRRSPSVVLADLPRDEKAWRVGKEGRERGRDGGRAGRRERRNRDDMWSRGRSSSFLSLLPTIPSFPFLPCSFFQDILVTTPFQLTSLQSTSSLYLALLCRRPDQPLPQALLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGRECKAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAKRLVEEEGEGTGEEERGNGASKGKGRWVPFEEWGPR 372 MDLSAGMLVVARERFPRASFWQGDVLDLPVIYEREGGKEEGLFTAVFFNACFGNVFDQARALREVGKLVKKGGRVVISHPLGADFVEELRRRSPSVVLADLPRDEKAWRVGKEGRERGRDGGRAGRRERRNRDDMWSRGRSSSFLSLLPTIPSFPFLPCSFFQDILVTTPFQLTSLQSTSSLYLALLCRRPDQPLPQALLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGRECKAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAKRLVEEEGEGTGEEERGNGASKGKGRWVPFEEWGPR Sbjct: 1 MDLSAGMLVVARERFPRASFWQGDVLDLPVIYEREGGKEEGLFTAVFFNACFGNVFDQARALREVGKLVKKGGRVVISHPLGADFVEELRRRSPSVVLADLPRDEKAWRVGKEGRERGRDGGRAGRRERRNRDDMWSRGRSSSFLSLLPTIPSFPFLPCSFFQDILVTTPFQLTSLQSTSSLYLALLCRRPDQPLPQALLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGRECKAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAKRLVEEEGEGTGEEERGNGASKGKGRWVPFEEWGPR 372
BLAST of EWM25182.1 vs. NCBI_GenBank
Match: gi|553187066|ref|XP_005854544.1| (riboflavin kinase [Nannochloropsis gaditana CCMP526] >gi|422294516|gb|EKU21816.1| riboflavin kinase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0 Identity = 313/372 (84.14%), Postives = 314/372 (84.41%), Query Frame = 0 Query: 1 MDLSAGMLVVARERFPRASFWQGDVLDLPVIYEREGGKEEGLFTAVFFNACFGNVFDQARALREVGKLVKKGGRVVISHPLGADFVEELRRRSPSVVLADLPRDEKAWRVGKEGRERGRDGGRAGRRERRNRDDMWSRGRSSSFLSLLPTIPSFPFLPCSFFQDILVTTPFQLTSLQSTSSLYLALLCRRPDQPLPQALLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGRECKAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAKRLVEEEGEGTGEEERGNGASKGKGRWVPFEEWGPR 372 MDLSAGMLVVARE FPRASFWQGDVLDLPVIYEREGGKEEGLFTAVFFNACFGNVFDQARALREVGKLVKKGGRVVISHPLGADFVEELRRRSPSVVLADLPRDEKAWR +L T P FQLTSLQSTSSLYLALLCRRPDQPLPQALLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGRECKAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAKRLVEEEGEGTGEEERGNGASKGKGRWVPFEEWGPR Sbjct: 208 MDLSAGMLVVARESFPRASFWQGDVLDLPVIYEREGGKEEGLFTAVFFNACFGNVFDQARALREVGKLVKKGGRVVISHPLGADFVEELRRRSPSVVLADLPRDEKAWR------------------------------------DILVTTP------------------FQLTSLQSTSSLYLALLCRRPDQPLPQALLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGRECKAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAKRLVEEEGEGTGEEERGNGASKGKGRWVPFEEWGPR 525
BLAST of EWM25182.1 vs. NCBI_GenBank
Match: gi|299115578|emb|CBN75781.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 178.333 bits (451), Expect = 6.148e-48 Identity = 117/314 (37.26%), Postives = 151/314 (48.09%), Query Frame = 0 Query: 46 VFFNACFGNVFDQARALREVGKLVKKGGRVVISHPLGADFVEELRRRSPSVVLADLPRDEKAWRVGKEGRERGRDGGRAGRRERRNRDDMWSRGRSSSFLSLLPTIPSFPFLPCSFFQDILVTTPFQLTSLQSTSSLYLALLCRRPDQPLPQALLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGREC----------------------KAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAK 337 V FNA FGN++DQ AL ++++GG+VVISHPLG DFV L+ +VV +LP + R+ + LP + + S +S LYLA+L + P + + L+G VS GY RGSKKLG PTANLP S F + +P GVY GWA + G K V N+GYSPTF G+EN EKIVE HLI G DFYG M ++L GF R E+KF SFP LVA I +DV DA +A+D P ++ K Sbjct: 175 VVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERL----------------------------------VQFLPLV---------------------IDSFESGPELYLAVLRKTPHRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAEN--LRTLPTGVYFGWAALEGAANKEGEGGKGDASGGGGDGGEGLWKCVANVGYSPTFAGQENAEKIVEGHLI-GYEGEDFYGRTMRMLLAGFQRREKKFASFPELVATINKDVGDAAMALDEPRFSAFK 430
BLAST of EWM25182.1 vs. NCBI_GenBank
Match: gi|1210513007|dbj|GAX28015.1| (riboflavin kinase [Fistulifera solaris]) HSP 1 Score: 168.703 bits (426), Expect = 2.276e-44 Identity = 124/333 (37.24%), Postives = 158/333 (47.45%), Query Frame = 0 Query: 42 LFTAVFFNACFGNVFDQARALREVGKLVKK------GGRVVISHPLGADFVEELRRRSPSVVLADLPRDEKAWRVGKEGRERGRDGGRAGRRERRNRDDMWSRGRSSSFLSLLPTIPSFPFLPCSF--FQDILVTTPFQLTSLQSTSS-LYLALLCRRPDQPLPQALLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGREC--KAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAKRLVEEEGEGTGEEERGNGASKGKGRW 363 LF + NACFGN + L +L+K GG + I+HPLGA+FV +L + +P V LP E+ + + FLP FQ Q S+Q + Y A L R LPQ + +GPV+ GY RG KKLGFPTANL ++F + +E + GVY GWA + GR KAVVN+G SPTF+G EN EKI+EAHL+ DFYGE M L L GFLRPE KF SF ALVA I D ++A+ A+DL Y K + E GN G+ W Sbjct: 182 LFDGIVMNACFGNFWSGLEVLERAAQLLKPPVPQSPGGFLFITHPLGAEFVAQLHQETPETVPHCLPNHEQLIHMTR-------------------------------------------FLPLQLIEFQ--------QRVSVQGEAQPFYCATLERVRHCCLPQLMRFRGPVASGYGRGGKKLGFPTANLEPAVF--RKALETVSTGVYFGWAVIEGRNACHKAVVNVGISPTFEGAENAEKIIEAHLLLEEPIDDFYGETMRLQLHGFLRPETKFDSFSALVAQIAADAKEAKEALDLRPYVTLKS--DTFLERNSPTWIGNSGGDGQASW 459
BLAST of EWM25182.1 vs. NCBI_GenBank
Match: gi|1210511474|dbj|GAX29288.1| (riboflavin kinase [Fistulifera solaris]) HSP 1 Score: 163.696 bits (413), Expect = 2.009e-42 Identity = 94/177 (53.11%), Postives = 112/177 (63.28%), Query Frame = 0 Query: 170 PFQLTSLQSTSSL-------YLALLCRRPDQPLPQALLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGREC--KAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAK 337 P QL LQ + SL Y L R LPQ + +GPV+ GY RG KKLGFPTANL +LF + +E +P GVY GWA + GR KAVVN+G+SPTF+G EN EKIVEAHL+ DFYGE M L L GFLRPE KF SFPALVA I D ++A+ A+DL Y+ K Sbjct: 260 PLQLIDLQKSVSLTGEAQPFYCGTLERVRHCCLPQLMRFRGPVASGYGRGGKKLGFPTANLEPALF--RKALETVPTGVYFGWAVIEGRNACHKAVVNVGFSPTFEGAENAEKIVEAHLLLEESIDDFYGETMRLQLHGFLRPEIKFDSFPALVAQITADAKEAKEALDLRPYSTLK 434
BLAST of EWM25182.1 vs. NCBI_GenBank
Match: gi|551659236|ref|XP_005832387.1| (hypothetical protein GUITHDRAFT_71408 [Guillardia theta CCMP2712] >gi|428176523|gb|EKX45407.1| hypothetical protein GUITHDRAFT_71408 [Guillardia theta CCMP2712]) HSP 1 Score: 150.599 bits (379), Expect = 6.555e-41 Identity = 74/132 (56.06%), Postives = 97/132 (73.48%), Query Frame = 0 Query: 201 LQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVG---RECKAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMD 329 ++G V+ G+ RG KKLG PTANLP S+F + ++ GVY GWA++ G + KAVVN+GYSPTF G ENREK+VEAHL++ F DFYG+ M L+LTGFLRPE KF SFP L+ AI +D+E++R A+D Sbjct: 1 MRGDVASGWGRGGKKLGIPTANLPESMFA--DALREVQTGVYLGWAQIGGVSKKSVKAVVNVGYSPTFVGAENREKVVEAHLLE-KFENDFYGKEMRLMLTGFLRPETKFDSFPELLEAIHKDIENSREALD 129
BLAST of EWM25182.1 vs. NCBI_GenBank
Match: gi|219118032|ref|XP_002179799.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408852|gb|EEC48785.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 147.517 bits (371), Expect = 1.027e-39 Identity = 80/148 (54.05%), Postives = 97/148 (65.54%), Query Frame = 0 Query: 199 LLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGREC---------KAVVNIGYSPTFQGEENREKIVEAHLIDGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAK 337 L L+G V GY RG KKLGFPTANLPS LF ++ ++D+P GVY GWA + E KAVVN+G+SPTF+G+EN EKIVEAHL+ DFY E M L L GFLRPE KF SFP L+ I DV DA+ A+D+ + G K Sbjct: 1 LRLRGKVDSGYGRGGKKLGFPTANLPSRLF--QNALQDVPAGVYFGWALLESDELAAPGRNIAHKAVVNVGFSPTFEGQENAEKIVEAHLMAEEPLTDFYNETMRLQLHGFLRPEIKFSSFPDLIKQINADVVDAKEALDVSPFVGFK 146
BLAST of EWM25182.1 vs. NCBI_GenBank
Match: gi|224001818|ref|XP_002290581.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974003|gb|EED92333.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 149.058 bits (375), Expect = 2.502e-38 Identity = 86/183 (46.99%), Postives = 111/183 (60.66%), Query Frame = 0 Query: 199 LLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARV--------VGREC--KAVVNIGYSPTFQGEENREKIVEAHLI---------------------DGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMD-LP-VYAGAKRLVEEEGEGTG 348 L L+GPV+ GY RG K+LG PTANLP+SLF +S +ED+ GVY GWA V +GR KAVVN+GYSPTF+G+EN+EKIVEAHLI D GDFYGE M L L GFLR E+KF SFP L+A I +D+ +A A+D +P +++ +++ G G Sbjct: 127 LRLRGPVATGYGRGGKQLGVPTANLPASLF--QSALEDVATGVYFGWAVVEAPSTDSTIGRNTPIKAVVNVGYSPTFEGKENKEKIVEAHLITSNSPMEKNELADEYSTSSADDTKIEGDFYGETMRLQLIGFLRAERKFDSFPDLIAQIHRDIGNAAWALDSMPYIFSKEAEFIQDSGHWVG 307
BLAST of EWM25182.1 vs. NCBI_GenBank
Match: gi|551572851|ref|XP_005772244.1| (hypothetical protein EMIHUDRAFT_444832 [Emiliania huxleyi CCMP1516] >gi|551600167|ref|XP_005781851.1| riboflavin kinase [Emiliania huxleyi CCMP1516] >gi|485623660|gb|EOD19815.1| hypothetical protein EMIHUDRAFT_444832 [Emiliania huxleyi CCMP1516] >gi|485634647|gb|EOD29422.1| riboflavin kinase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 137.887 bits (346), Expect = 1.958e-35 Identity = 81/151 (53.64%), Postives = 95/151 (62.91%), Query Frame = 0 Query: 190 RPDQPLPQALLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARVVGRECKAVVNIGYSPTFQGEENREKIVEAHLI--DGAFPGDFYGELMTLILTGFLRPEQK--FPSFPA-LVAAIQQDVEDARVAMDLPVYAG 335 R QPLP L GPV QGY RGS KLGFPTANLP SLF + + + GVY GWA + G K V NIG SP+F GEEN E IVEAH+I D P DFYGE + L+L GF+RPE+K F + P L+AAI DV A +D P +A Sbjct: 31 RAVQPLPALPALSGPVLQGYGRGSAKLGFPTANLPCSLF--QDRLVQLERGVYLGWAALGGDVRKCVANIGISPSFVGEENAETIVEAHVIAEDAPLPADFYGETLRLLLLGFVRPERKFDFTNGPGELIAAIGADVATATAELDRPPFAA 179
BLAST of EWM25182.1 vs. NCBI_GenBank
Match: gi|1072233803|gb|OEU18533.1| (riboflavin kinase, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 136.346 bits (342), Expect = 2.842e-35 Identity = 78/165 (47.27%), Postives = 99/165 (60.00%), Query Frame = 0 Query: 199 LLLQGPVSQGYKRGSKKLGFPTANLPSSLFVVKSLIEDIPVGVYCGWARV------VGRECKAVVNIGYSPTFQGEENREKIVEAHLI--------------------DGAFPGDFYGELMTLILTGFLRPEQKFPSFPALVAAIQQDVEDARVAMDLPVYAGAK 337 L +G V +GY RG KKLG PTANLPSSLF ++ +ED+ GVY GWA + + + KAVVN+GYSPTF+G+EN+EKI+EAHLI DFYG M L L GFLR E+KF SFP L+A I DV+DAR+++D Y + Sbjct: 1 LRYRGSVDEGYGRGGKKLGVPTANLPSSLF--QNALEDVATGVYFGWAAIERNNNELLQVYKAVVNVGYSPTFEGKENKEKIIEAHLILEKEEEEEDHNENDGGDDDKTSNIIEDFYGIPMRLQLLGFLREEKKFDSFPELIAQILADVDDARLSLDCHPYQSCR 163 The following BLAST results are available for this feature:
BLAST of EWM25182.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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