EWM30126.1, cds549 (CDS) Nannochloropsis gaditana

Overview
NameEWM30126.1
Unique Namecds549
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1371691..1372155 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30126.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100541g5.963.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1371691..1372155 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM30126.1 vs. NCBI_GenBank
Match: gi|585112776|gb|EWM30126.1| (hypothetical protein Naga_100541g5 [Nannochloropsis gaditana])

HSP 1 Score: 306.22 bits (783), Expect = 3.025e-105
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 
Query:    1 MGNGHNDRTVPAGMICPSHSLFPVLPARTLVGEWKGLRRNFPPCFHCFAPGMEVAKARGPFHFPGIFPKGRGPSPSLATGSRPVVLSRRRGLPATWGFCWLRRKGGNGATQAGSIEGCAGQGEGEEVGVGGKIKTGIRRGWEERGETKIFIGLG 154
            MGNGHNDRTVPAGMICPSHSLFPVLPARTLVGEWKGLRRNFPPCFHCFAPGMEVAKARGPFHFPGIFPKGRGPSPSLATGSRPVVLSRRRGLPATWGFCWLRRKGGNGATQAGSIEGCAGQGEGEEVGVGGKIKTGIRRGWEERGETKIFIGLG
Sbjct:    1 MGNGHNDRTVPAGMICPSHSLFPVLPARTLVGEWKGLRRNFPPCFHCFAPGMEVAKARGPFHFPGIFPKGRGPSPSLATGSRPVVLSRRRGLPATWGFCWLRRKGGNGATQAGSIEGCAGQGEGEEVGVGGKIKTGIRRGWEERGETKIFIGLG 154
The following BLAST results are available for this feature:
BLAST of EWM30126.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112776|gb|EWM30126.1|3.025e-105100.00hypothetical protein Naga_100541g5 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna549rna549Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications