EWM25187.1, cds5485 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25187.1 vs. NCBI_GenBank
Match: gi|585106849|gb|EWM25187.1| (hypothetical protein Naga_100146g5 [Nannochloropsis gaditana]) HSP 1 Score: 1065.45 bits (2754), Expect = 0.000e+0 Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 0
Query: 1 MGMKKRRRTKQGTRRGSALRPPKRKVLHPRRIKSWIVKKLSPMRRCHVRIYRKAARPKAPSALPGAGLVWNAKPVRSNAIRRNRDASDAFATAFYASLKLEDRDGRQNGGKEGSGEEGEEAKALLDYTSVAACLPVSKSISSSWAAMDVSFSYFSPCRLYLAADDAVQDGKDVLATQSKALLLSSSQLPPPPTSNSASYEPALPPSLLPSFPSSFPPNPASVGPLLQLSSAATTPPLSSISSAPSVSPPYYPNPLGKREEHPVNEVESQMLAARSLKHLKDGHASFPSSSTPAYASSSFPSRGPPASEGRLYGPMHGSMNPNLSSGYGGNFQSHLLPPGYQSYPSYGNIREMHSLAPAFPPYHPGPGAFHMQHVYPNNAGLTDVPSPLPAPSSYPPFPSPSSVAALDGPGSMVRDTSMPGLGLRDGRQGNWVDPHHPPHQHASMQFVSQQQQREQQLRHGQGQPYHPQQATHFHQDARQPWWQQHLRPPHPVPQGTLQCQQQQLIFERQHELQQQRQRQQQQPQLGLM 528
MGMKKRRRTKQGTRRGSALRPPKRKVLHPRRIKSWIVKKLSPMRRCHVRIYRKAARPKAPSALPGAGLVWNAKPVRSNAIRRNRDASDAFATAFYASLKLEDRDGRQNGGKEGSGEEGEEAKALLDYTSVAACLPVSKSISSSWAAMDVSFSYFSPCRLYLAADDAVQDGKDVLATQSKALLLSSSQLPPPPTSNSASYEPALPPSLLPSFPSSFPPNPASVGPLLQLSSAATTPPLSSISSAPSVSPPYYPNPLGKREEHPVNEVESQMLAARSLKHLKDGHASFPSSSTPAYASSSFPSRGPPASEGRLYGPMHGSMNPNLSSGYGGNFQSHLLPPGYQSYPSYGNIREMHSLAPAFPPYHPGPGAFHMQHVYPNNAGLTDVPSPLPAPSSYPPFPSPSSVAALDGPGSMVRDTSMPGLGLRDGRQGNWVDPHHPPHQHASMQFVSQQQQREQQLRHGQGQPYHPQQATHFHQDARQPWWQQHLRPPHPVPQGTLQCQQQQLIFERQHELQQQRQRQQQQPQLGLM
Sbjct: 1 MGMKKRRRTKQGTRRGSALRPPKRKVLHPRRIKSWIVKKLSPMRRCHVRIYRKAARPKAPSALPGAGLVWNAKPVRSNAIRRNRDASDAFATAFYASLKLEDRDGRQNGGKEGSGEEGEEAKALLDYTSVAACLPVSKSISSSWAAMDVSFSYFSPCRLYLAADDAVQDGKDVLATQSKALLLSSSQLPPPPTSNSASYEPALPPSLLPSFPSSFPPNPASVGPLLQLSSAATTPPLSSISSAPSVSPPYYPNPLGKREEHPVNEVESQMLAARSLKHLKDGHASFPSSSTPAYASSSFPSRGPPASEGRLYGPMHGSMNPNLSSGYGGNFQSHLLPPGYQSYPSYGNIREMHSLAPAFPPYHPGPGAFHMQHVYPNNAGLTDVPSPLPAPSSYPPFPSPSSVAALDGPGSMVRDTSMPGLGLRDGRQGNWVDPHHPPHQHASMQFVSQQQQREQQLRHGQGQPYHPQQATHFHQDARQPWWQQHLRPPHPVPQGTLQCQQQQLIFERQHELQQQRQRQQQQPQLGLM 528
BLAST of EWM25187.1 vs. NCBI_GenBank
Match: gi|585106848|gb|EWM25186.1| (hypothetical protein Naga_100146g7 [Nannochloropsis gaditana]) HSP 1 Score: 67.0106 bits (162), Expect = 3.892e-8 Identity = 81/241 (33.61%), Postives = 110/241 (45.64%), Query Frame = 0
Query: 158 RLYLAADDAVQDGKDVLATQSKALLLSSSQLPPPPTSNSASYEPA----LPPSLLPSFPSSFPPNPASVGPLLQLSSAATTPPLSSISSAPSVSPP-------YYPNPLGKREEHPVNEVESQMLAARSLKHLKDGHAS-FP-------SSSTPAYASSSFPSRGPPASEGRLYGPMHGSMNPN--LSSGYGGNFQSHLLPPGYQSYPSYGN-IREMHSLAPAFPPYHPGPGAFHMQHVYP 376
R+YLA D A+Q D+ SKALLLS++Q S SAS +P LPPS LP S+ P L S + ++ +SS S PP + GKR+ P +E E +++AARSLK LK+G AS FP S+S P + SFPS A G+++ N L +G GG + SH P Q Y +R+M Y P P + V+P
Sbjct: 191 RMYLAEDAAIQKEGDLWNAHSKALLLSAAQARSKEESISASSDPVRPAYLPPSGLPGLTSTTRGTSLPASPPLPASLSPPLSDITGVSS--SFRPPHSQFSSSFLTRASGKRQMPPCSEAEDRLVAARSLKCLKNGDASPFPPPHPIVGSTSRPVHP--SFPSFATVAG-------TRGAVDRNNYLGNGMGG-YYSHGYPGSTQPNRPYSTPLRDMSLGTTDRVSYVP-PNDIFLDPVFP 418 The following BLAST results are available for this feature:
BLAST of EWM25187.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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