EWM25198.1, cds5471 (CDS) Nannochloropsis gaditana

Overview
NameEWM25198.1
Unique Namecds5471
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:74857..74924 +
Alignment locationCM002466.1:75016..75163 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25198.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100722g5.10564.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:74857..74924 +
CM002466.1supercontigCM002466.1:75016..75163 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM25198.1 vs. NCBI_GenBank
Match: gi|585106871|gb|EWM25198.1| (hypothetical protein Naga_100722g5 [Nannochloropsis gaditana])

HSP 1 Score: 144.436 bits (363), Expect = 6.928e-44
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:    1 MGRSWPSVAEREEAKEGGRTNVPGGVWVYVCGNVYDCGGMVGAVLLYVAMKRKEQREIRQHAESREEVLSR 71
            MGRSWPSVAEREEAKEGGRTNVPGGVWVYVCGNVYDCGGMVGAVLLYVAMKRKEQREIRQHAESREEVLSR
Sbjct:    1 MGRSWPSVAEREEAKEGGRTNVPGGVWVYVCGNVYDCGGMVGAVLLYVAMKRKEQREIRQHAESREEVLSR 71
The following BLAST results are available for this feature:
BLAST of EWM25198.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106871|gb|EWM25198.1|6.928e-44100.00hypothetical protein Naga_100722g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5485rna5485Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications