EWM25217.1, cds5456 (CDS) Nannochloropsis gaditana

Overview
NameEWM25217.1
Unique Namecds5456
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:24832..24924 +
Alignment locationCM002466.1:25103..25384 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25217.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100751g1.1615.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:24832..24924 +
CM002466.1supercontigCM002466.1:25103..25384 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25217.1 vs. NCBI_GenBank
Match: gi|585106900|gb|EWM25217.1| (hypothetical protein Naga_100751g1 [Nannochloropsis gaditana])

HSP 1 Score: 244.202 bits (622), Expect = 1.126e-81
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 
Query:    1 MSVLEGQANWGGLPRPDRVVAWLTSVNAEDLLDVARLLQPGTSSSKNIVDFATEVVRGLLTERAIPRVRKAAAGLGGVDTRMSSSVERNGMGKKRAEGDGRRKMEGKGGAQALEEMERGRPTGL 124
            MSVLEGQANWGGLPRPDRVVAWLTSVNAEDLLDVARLLQPGTSSSKNIVDFATEVVRGLLTERAIPRVRKAAAGLGGVDTRMSSSVERNGMGKKRAEGDGRRKMEGKGGAQALEEMERGRPTGL
Sbjct:    1 MSVLEGQANWGGLPRPDRVVAWLTSVNAEDLLDVARLLQPGTSSSKNIVDFATEVVRGLLTERAIPRVRKAAAGLGGVDTRMSSSVERNGMGKKRAEGDGRRKMEGKGGAQALEEMERGRPTGL 124
The following BLAST results are available for this feature:
BLAST of EWM25217.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106900|gb|EWM25217.1|1.126e-81100.00hypothetical protein Naga_100751g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5469rna5469Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications