EWM25218.1, cds5455 (CDS) Nannochloropsis gaditana

Overview
NameEWM25218.1
Unique Namecds5455
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:20839..21409 +
Alignment locationCM002466.1:21744..21845 +
Alignment locationCM002466.1:22170..22243 +
Alignment locationCM002466.1:22287..22313 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25218.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101194g1.9857.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:20839..21409 +
CM002466.1supercontigCM002466.1:21744..21845 +
CM002466.1supercontigCM002466.1:22170..22243 +
CM002466.1supercontigCM002466.1:22287..22313 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Homology
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|585106905|gb|EWM25218.1| (hypothetical protein Naga_101194g1 [Nannochloropsis gaditana])

HSP 1 Score: 520.39 bits (1339), Expect = 0.000e+0
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
Query:    1 MYPHSYQAFLPFSCITRTGSRCVDRPKDLKSSSCSEVTRSSPPSPMPRITCSPSLRDPFFLLLVVVTMLHWRSLFVAAHGAVGRSGAFLVPTAFGGSSSRSSMRGRLIPPYRLMSTTLPNPSVSDPKSVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDAESSGARGR 257
            MYPHSYQAFLPFSCITRTGSRCVDRPKDLKSSSCSEVTRSSPPSPMPRITCSPSLRDPFFLLLVVVTMLHWRSLFVAAHGAVGRSGAFLVPTAFGGSSSRSSMRGRLIPPYRLMSTTLPNPSVSDPKSVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDAESSGARGR
Sbjct:    1 MYPHSYQAFLPFSCITRTGSRCVDRPKDLKSSSCSEVTRSSPPSPMPRITCSPSLRDPFFLLLVVVTMLHWRSLFVAAHGAVGRSGAFLVPTAFGGSSSRSSMRGRLIPPYRLMSTTLPNPSVSDPKSVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDAESSGARGR 257          
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|298711349|emb|CBJ32495.1| (Predicted unusual protein kinase (ISS) [Ectocarpus siliculosus])

HSP 1 Score: 159.844 bits (403), Expect = 5.373e-42
Identity = 73/110 (66.36%), Postives = 88/110 (80.00%), Query Frame = 0
Query:  140 YNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249
            Y + D LT  DGLPLVY+  +I +YWD RP E+  RW+ FLSVT PF+T++V+ +T G +   EA LARDLRIV+EKLGPTF+KLGQALSIRPDVIGPAAT+EL KLQDA
Sbjct:  237 YMYGDVLTDADGLPLVYDSDSIGRYWDKRPGELNSRWSKFLSVTVPFVTRVVRDYTSGNIMKNEAVLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDA 346          
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|552810093|ref|XP_005843110.1| (hypothetical protein CHLNCDRAFT_141540 [Chlorella variabilis] >gi|307102740|gb|EFN51008.1| hypothetical protein CHLNCDRAFT_141540 [Chlorella variabilis])

HSP 1 Score: 111.694 bits (278), Expect = 3.056e-25
Identity = 55/104 (52.88%), Postives = 67/104 (64.42%), Query Frame = 0
Query:  147 TSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVKGFTQGTLFDK--EAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQD 248
               DGLPLVY  ++I  YW  RP E+  RW  F  ++ P+LTKL  GF QG L D   ++ LARD    LE+LGPTF+KLGQ +SIRPDV+ P    EL KLQD
Sbjct:   56 VDEDGLPLVYNEESIAAYWSNRPGELTSRWTKFAGISVPWLTKLANGFIQGRLQDSTTQSALARDAVDNLERLGPTFIKLGQIMSIRPDVLPPPVMGELAKLQD 159          
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|551627318|ref|XP_005793640.1| (hypothetical protein EMIHUDRAFT_462052 [Emiliania huxleyi CCMP1516] >gi|485648302|gb|EOD41211.1| hypothetical protein EMIHUDRAFT_462052 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 112.849 bits (281), Expect = 1.225e-24
Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 0
Query:  122 SVSDPKSVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTK----LVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQD 248
            SV D ++ P    S +     R  L   +GLPLVY+ + I+KYW+ +   +Q RWA FLSV+ PFLT+    LV G T   L D  +ELARD R  ++KLGPT+VK+GQ +S+RPD++  AA +EL  LQD
Sbjct:   64 SVQDVEA-PDADDSFVAIDESRTGLVDEEGLPLVYDKEAIQKYWEGQGGALQSRWAEFLSVSVPFLTRVAALLVSGGTD-ALNDSASELARDARERIQKLGPTYVKMGQMMSVRPDILPQAALDELTILQD 192          
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|551592647|ref|XP_005780394.1| (hypothetical protein EMIHUDRAFT_457106 [Emiliania huxleyi CCMP1516] >gi|485633018|gb|EOD27965.1| hypothetical protein EMIHUDRAFT_457106 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 112.464 bits (280), Expect = 1.671e-24
Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 0
Query:  122 SVSDPKSVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTK----LVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQD 248
            SV D ++ P    S +     R  L   +GLPLVY+ + I+KYW+ +   +Q RWA FLSV+ PFLT+    LV G T   L D  +ELARD R  ++KLGPT+VK+GQ +S+RPD++  AA +EL  LQD
Sbjct:   64 SVQDVEA-PDADDSFVAIDESRTGLVDEEGLPLVYDKEAIQKYWEGQGGALQSRWAEFLSVSVPFLTRVAALLVSGGTD-ALNDSASELARDARERIQKLGPTYVKMGQMMSVRPDILPQAALDELTILQD 192          
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|1199294476|gb|OUS49557.1| (ABC1 family-domain-containing protein [Ostreococcus tauri])

HSP 1 Score: 111.309 bits (277), Expect = 4.174e-24
Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0
Query:  140 YNHRDALTS--RDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVK-GFTQGT--LFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249
            Y  R A T    DGLPLVY+ + I+KYWD +   +QRRW  FLS++ PFLTK+     T G+  L   +  LARD RI++EKLGPT++K GQ +S+RPDV+  AA +EL  LQD+
Sbjct:  110 YVARSATTEVDADGLPLVYDKEAIQKYWDKQGGALQRRWGEFLSLSVPFLTKIATLAITGGSAELSKNDRVLARDARIIIEKLGPTYIKAGQMMSVRPDVLPQAALDELAVLQDS 224          
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|693500416|emb|CEF97661.1| (Protein kinase-like domain [Ostreococcus tauri])

HSP 1 Score: 110.923 bits (276), Expect = 4.809e-24
Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0
Query:  140 YNHRDALTS--RDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVK-GFTQGT--LFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249
            Y  R A T    DGLPLVY+ + I+KYWD +   +QRRW  FLS++ PFLTK+     T G+  L   +  LARD RI++EKLGPT++K GQ +S+RPDV+  AA +EL  LQD+
Sbjct:   67 YVARSATTEVDADGLPLVYDKEAIQKYWDKQGGALQRRWGEFLSLSVPFLTKIATLAITGGSAELSKNDRVLARDARIIIEKLGPTYIKAGQMMSVRPDVLPQAALDELAVLQDS 181          
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|308803192|ref|XP_003078909.1| (Predicted unusual protein kinase (ISS) [Ostreococcus tauri])

HSP 1 Score: 110.923 bits (276), Expect = 5.277e-24
Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0
Query:  140 YNHRDALTS--RDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVK-GFTQGT--LFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249
            Y  R A T    DGLPLVY+ + I+KYWD +   +QRRW  FLS++ PFLTK+     T G+  L   +  LARD RI++EKLGPT++K GQ +S+RPDV+  AA +EL  LQD+
Sbjct:   67 YVARSATTEVDADGLPLVYDKEAIQKYWDKQGGALQRRWGEFLSLSVPFLTKIATLAITGGSAELSKNDRVLARDARIIIEKLGPTYIKAGQMMSVRPDVLPQAALDELAVLQDS 181          
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|922855244|gb|KOO23710.1| (hypothetical protein Ctob_005067 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 109.768 bits (273), Expect = 1.556e-23
Identity = 60/133 (45.11%), Postives = 79/133 (59.40%), Query Frame = 0
Query:  122 SVSDPK-SVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTK----LVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249
            SV+D     P   SS +     R  L   +GLPL+Y+   I+KYW A+   +Q RW  FL VT PFLT+    L+ G T   L     +LARD R+ +EKLGPT++K+GQ LS+RPDV+   A +ELQ LQD 
Sbjct:   70 SVADKGIDAPEAKSSFVSMDTERAGLVDDEGLPLIYDKDAIQKYWAAQSGALQSRWLEFLGVTVPFLTRVAGLLISGGTD-KLQSNARDLARDARVGIEKLGPTYIKMGQMLSVRPDVLPQEALDELQILQDG 201          
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|145345634|ref|XP_001417309.1| (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >gi|144577536|gb|ABO95602.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 107.842 bits (268), Expect = 3.286e-23
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 0
Query:  148 SRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVK-GFTQGT--LFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249
              DGLPLVY+   I+KYWD +   +QRRW  FLS++ PFLTK+     T G+  L   +  LA+D RI++EKLGPT++K GQ +S+RPDV+  AA +EL  LQD+
Sbjct:    2 DEDGLPLVYDKAQIQKYWDKQGGALQRRWGEFLSLSVPFLTKVATLAITGGSAELSKNDRALAKDARIIIEKLGPTYIKAGQMMSVRPDVLPQAALDELAVLQDS 106          
The following BLAST results are available for this feature:
BLAST of EWM25218.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106905|gb|EWM25218.1|0.000e+0100.00hypothetical protein Naga_101194g1 [Nannochloropsi... [more]
gi|298711349|emb|CBJ32495.1|5.373e-4266.36Predicted unusual protein kinase (ISS) [Ectocarpus... [more]
gi|552810093|ref|XP_005843110.1|3.056e-2552.88hypothetical protein CHLNCDRAFT_141540 [Chlorella ... [more]
gi|551627318|ref|XP_005793640.1|1.225e-2446.56hypothetical protein EMIHUDRAFT_462052 [Emiliania ... [more]
gi|551592647|ref|XP_005780394.1|1.671e-2446.56hypothetical protein EMIHUDRAFT_457106 [Emiliania ... [more]
gi|1199294476|gb|OUS49557.1|4.174e-2450.43ABC1 family-domain-containing protein [Ostreococcu... [more]
gi|693500416|emb|CEF97661.1|4.809e-2450.43Protein kinase-like domain [Ostreococcus tauri][more]
gi|308803192|ref|XP_003078909.1|5.277e-2450.43Predicted unusual protein kinase (ISS) [Ostreococc... [more]
gi|922855244|gb|KOO23710.1|1.556e-2345.11hypothetical protein Ctob_005067 [Chrysochromulina... [more]
gi|145345634|ref|XP_001417309.1|3.286e-2350.48predicted protein, partial [Ostreococcus lucimarin... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5468rna5468Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications