EWM25218.1, cds5455 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|585106905|gb|EWM25218.1| (hypothetical protein Naga_101194g1 [Nannochloropsis gaditana]) HSP 1 Score: 520.39 bits (1339), Expect = 0.000e+0 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0 Query: 1 MYPHSYQAFLPFSCITRTGSRCVDRPKDLKSSSCSEVTRSSPPSPMPRITCSPSLRDPFFLLLVVVTMLHWRSLFVAAHGAVGRSGAFLVPTAFGGSSSRSSMRGRLIPPYRLMSTTLPNPSVSDPKSVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDAESSGARGR 257 MYPHSYQAFLPFSCITRTGSRCVDRPKDLKSSSCSEVTRSSPPSPMPRITCSPSLRDPFFLLLVVVTMLHWRSLFVAAHGAVGRSGAFLVPTAFGGSSSRSSMRGRLIPPYRLMSTTLPNPSVSDPKSVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDAESSGARGR Sbjct: 1 MYPHSYQAFLPFSCITRTGSRCVDRPKDLKSSSCSEVTRSSPPSPMPRITCSPSLRDPFFLLLVVVTMLHWRSLFVAAHGAVGRSGAFLVPTAFGGSSSRSSMRGRLIPPYRLMSTTLPNPSVSDPKSVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDAESSGARGR 257
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|298711349|emb|CBJ32495.1| (Predicted unusual protein kinase (ISS) [Ectocarpus siliculosus]) HSP 1 Score: 159.844 bits (403), Expect = 5.373e-42 Identity = 73/110 (66.36%), Postives = 88/110 (80.00%), Query Frame = 0 Query: 140 YNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249 Y + D LT DGLPLVY+ +I +YWD RP E+ RW+ FLSVT PF+T++V+ +T G + EA LARDLRIV+EKLGPTF+KLGQALSIRPDVIGPAAT+EL KLQDA Sbjct: 237 YMYGDVLTDADGLPLVYDSDSIGRYWDKRPGELNSRWSKFLSVTVPFVTRVVRDYTSGNIMKNEAVLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDA 346
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|552810093|ref|XP_005843110.1| (hypothetical protein CHLNCDRAFT_141540 [Chlorella variabilis] >gi|307102740|gb|EFN51008.1| hypothetical protein CHLNCDRAFT_141540 [Chlorella variabilis]) HSP 1 Score: 111.694 bits (278), Expect = 3.056e-25 Identity = 55/104 (52.88%), Postives = 67/104 (64.42%), Query Frame = 0 Query: 147 TSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVKGFTQGTLFDK--EAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQD 248 DGLPLVY ++I YW RP E+ RW F ++ P+LTKL GF QG L D ++ LARD LE+LGPTF+KLGQ +SIRPDV+ P EL KLQD Sbjct: 56 VDEDGLPLVYNEESIAAYWSNRPGELTSRWTKFAGISVPWLTKLANGFIQGRLQDSTTQSALARDAVDNLERLGPTFIKLGQIMSIRPDVLPPPVMGELAKLQD 159
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|551627318|ref|XP_005793640.1| (hypothetical protein EMIHUDRAFT_462052 [Emiliania huxleyi CCMP1516] >gi|485648302|gb|EOD41211.1| hypothetical protein EMIHUDRAFT_462052 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 112.849 bits (281), Expect = 1.225e-24 Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 0 Query: 122 SVSDPKSVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTK----LVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQD 248 SV D ++ P S + R L +GLPLVY+ + I+KYW+ + +Q RWA FLSV+ PFLT+ LV G T L D +ELARD R ++KLGPT+VK+GQ +S+RPD++ AA +EL LQD Sbjct: 64 SVQDVEA-PDADDSFVAIDESRTGLVDEEGLPLVYDKEAIQKYWEGQGGALQSRWAEFLSVSVPFLTRVAALLVSGGTD-ALNDSASELARDARERIQKLGPTYVKMGQMMSVRPDILPQAALDELTILQD 192
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|551592647|ref|XP_005780394.1| (hypothetical protein EMIHUDRAFT_457106 [Emiliania huxleyi CCMP1516] >gi|485633018|gb|EOD27965.1| hypothetical protein EMIHUDRAFT_457106 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 112.464 bits (280), Expect = 1.671e-24 Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 0 Query: 122 SVSDPKSVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTK----LVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQD 248 SV D ++ P S + R L +GLPLVY+ + I+KYW+ + +Q RWA FLSV+ PFLT+ LV G T L D +ELARD R ++KLGPT+VK+GQ +S+RPD++ AA +EL LQD Sbjct: 64 SVQDVEA-PDADDSFVAIDESRTGLVDEEGLPLVYDKEAIQKYWEGQGGALQSRWAEFLSVSVPFLTRVAALLVSGGTD-ALNDSASELARDARERIQKLGPTYVKMGQMMSVRPDILPQAALDELTILQD 192
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|1199294476|gb|OUS49557.1| (ABC1 family-domain-containing protein [Ostreococcus tauri]) HSP 1 Score: 111.309 bits (277), Expect = 4.174e-24 Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0 Query: 140 YNHRDALTS--RDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVK-GFTQGT--LFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249 Y R A T DGLPLVY+ + I+KYWD + +QRRW FLS++ PFLTK+ T G+ L + LARD RI++EKLGPT++K GQ +S+RPDV+ AA +EL LQD+ Sbjct: 110 YVARSATTEVDADGLPLVYDKEAIQKYWDKQGGALQRRWGEFLSLSVPFLTKIATLAITGGSAELSKNDRVLARDARIIIEKLGPTYIKAGQMMSVRPDVLPQAALDELAVLQDS 224
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|693500416|emb|CEF97661.1| (Protein kinase-like domain [Ostreococcus tauri]) HSP 1 Score: 110.923 bits (276), Expect = 4.809e-24 Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0 Query: 140 YNHRDALTS--RDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVK-GFTQGT--LFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249 Y R A T DGLPLVY+ + I+KYWD + +QRRW FLS++ PFLTK+ T G+ L + LARD RI++EKLGPT++K GQ +S+RPDV+ AA +EL LQD+ Sbjct: 67 YVARSATTEVDADGLPLVYDKEAIQKYWDKQGGALQRRWGEFLSLSVPFLTKIATLAITGGSAELSKNDRVLARDARIIIEKLGPTYIKAGQMMSVRPDVLPQAALDELAVLQDS 181
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|308803192|ref|XP_003078909.1| (Predicted unusual protein kinase (ISS) [Ostreococcus tauri]) HSP 1 Score: 110.923 bits (276), Expect = 5.277e-24 Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0 Query: 140 YNHRDALTS--RDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVK-GFTQGT--LFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249 Y R A T DGLPLVY+ + I+KYWD + +QRRW FLS++ PFLTK+ T G+ L + LARD RI++EKLGPT++K GQ +S+RPDV+ AA +EL LQD+ Sbjct: 67 YVARSATTEVDADGLPLVYDKEAIQKYWDKQGGALQRRWGEFLSLSVPFLTKIATLAITGGSAELSKNDRVLARDARIIIEKLGPTYIKAGQMMSVRPDVLPQAALDELAVLQDS 181
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|922855244|gb|KOO23710.1| (hypothetical protein Ctob_005067 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 109.768 bits (273), Expect = 1.556e-23 Identity = 60/133 (45.11%), Postives = 79/133 (59.40%), Query Frame = 0 Query: 122 SVSDPK-SVPTPPSSSIPDYNHRDALTSRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTK----LVKGFTQGTLFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249 SV+D P SS + R L +GLPL+Y+ I+KYW A+ +Q RW FL VT PFLT+ L+ G T L +LARD R+ +EKLGPT++K+GQ LS+RPDV+ A +ELQ LQD Sbjct: 70 SVADKGIDAPEAKSSFVSMDTERAGLVDDEGLPLIYDKDAIQKYWAAQSGALQSRWLEFLGVTVPFLTRVAGLLISGGTD-KLQSNARDLARDARVGIEKLGPTYIKMGQMLSVRPDVLPQEALDELQILQDG 201
BLAST of EWM25218.1 vs. NCBI_GenBank
Match: gi|145345634|ref|XP_001417309.1| (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >gi|144577536|gb|ABO95602.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 107.842 bits (268), Expect = 3.286e-23 Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 0 Query: 148 SRDGLPLVYEPKTIKKYWDARPAEMQRRWALFLSVTAPFLTKLVK-GFTQGT--LFDKEAELARDLRIVLEKLGPTFVKLGQALSIRPDVIGPAATEELQKLQDA 249 DGLPLVY+ I+KYWD + +QRRW FLS++ PFLTK+ T G+ L + LA+D RI++EKLGPT++K GQ +S+RPDV+ AA +EL LQD+ Sbjct: 2 DEDGLPLVYDKAQIQKYWDKQGGALQRRWGEFLSLSVPFLTKVATLAITGGSAELSKNDRALAKDARIIIEKLGPTYIKAGQMMSVRPDVLPQAALDELAVLQDS 106 The following BLAST results are available for this feature:
BLAST of EWM25218.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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