EWM25230.1, cds5439 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25230.1 vs. NCBI_GenBank
Match: gi|585106922|gb|EWM25230.1| (cyclin-y-like protein [Nannochloropsis gaditana]) HSP 1 Score: 775.393 bits (2001), Expect = 0.000e+0 Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0 Query: 1 MWHNATPYPRMSSAMSYVSLPSSTYSLPLAWPPCAIWLPQFSQVRLRCARFSVSNHPNLLHLSVLHPFPTDARPLFACLRTYTDRGVMGAAVSHPSLSASSTHHQQLWGKEGGTRRRESGRTGKNRGSTAHGLKGVGTTSSPPVDILASPCEVEEGRGGGVKGGGEGRDKKAREGKRVEGSRTGEAGAPGVRFVATEGLGDPQAEHEVFTPSYAAYTPSSRKTHGLSYKSPERRQRHVLAPPSSVSRPNVDDALRRVSVVLHQHIATCEGRLARLKALRRRQRQRRRQVRAERKDALRSRRQQLLEESSSHVPRAASPSLSILSSSSSHSDDELLDDEASLSTTQEDEVRVLSLFPLVFPPTRLLCLVLLLGVGGERSRLFSRLVG 386 MWHNATPYPRMSSAMSYVSLPSSTYSLPLAWPPCAIWLPQFSQVRLRCARFSVSNHPNLLHLSVLHPFPTDARPLFACLRTYTDRGVMGAAVSHPSLSASSTHHQQLWGKEGGTRRRESGRTGKNRGSTAHGLKGVGTTSSPPVDILASPCEVEEGRGGGVKGGGEGRDKKAREGKRVEGSRTGEAGAPGVRFVATEGLGDPQAEHEVFTPSYAAYTPSSRKTHGLSYKSPERRQRHVLAPPSSVSRPNVDDALRRVSVVLHQHIATCEGRLARLKALRRRQRQRRRQVRAERKDALRSRRQQLLEESSSHVPRAASPSLSILSSSSSHSDDELLDDEASLSTTQEDEVRVLSLFPLVFPPTRLLCLVLLLGVGGERSRLFSRLVG Sbjct: 1 MWHNATPYPRMSSAMSYVSLPSSTYSLPLAWPPCAIWLPQFSQVRLRCARFSVSNHPNLLHLSVLHPFPTDARPLFACLRTYTDRGVMGAAVSHPSLSASSTHHQQLWGKEGGTRRRESGRTGKNRGSTAHGLKGVGTTSSPPVDILASPCEVEEGRGGGVKGGGEGRDKKAREGKRVEGSRTGEAGAPGVRFVATEGLGDPQAEHEVFTPSYAAYTPSSRKTHGLSYKSPERRQRHVLAPPSSVSRPNVDDALRRVSVVLHQHIATCEGRLARLKALRRRQRQRRRQVRAERKDALRSRRQQLLEESSSHVPRAASPSLSILSSSSSHSDDELLDDEASLSTTQEDEVRVLSLFPLVFPPTRLLCLVLLLGVGGERSRLFSRLVG 386
BLAST of EWM25230.1 vs. NCBI_GenBank
Match: gi|1173928411|gb|OQR82010.1| (cyclin-Y [Thraustotheca clavata]) HSP 1 Score: 77.0258 bits (188), Expect = 5.363e-12 Identity = 40/80 (50.00%), Postives = 55/80 (68.75%), Query Frame = 0 Query: 201 DPQAEHEVFTPSYAAYTPSSRKTHGLSYKSPERRQ--RHVLAPPSSVSRPNVDDALRRVSVVLHQHIATCEGRLARLKAL 278 D + + E+F P++ TP R T+GL Y++PE R LAPPSSV++PN DD+LRRVSVVL+QHI CE R+ +A+ Sbjct: 23 DVEEDTELFQPTHTVCTPKLR-TNGLKYRAPEARVDLSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRIREKEAM 101
BLAST of EWM25230.1 vs. NCBI_GenBank
Match: gi|1173946401|gb|OQR94939.1| (cyclin-Y-like protein [Achlya hypogyna]) HSP 1 Score: 76.6406 bits (187), Expect = 8.063e-12 Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 0 Query: 201 DPQAEHEVFTPSYAAYTPSSRKTHGLSYKSPERRQR--HVLAPPSSVSRPNVDDALRRVSVVLHQHIATCEGRL 272 D E E+F P++ TP R T+GL Y++P+ R LAPPSSV++PN DD+LRRVSVVL+QHI CE RL Sbjct: 23 DVDVESELFQPTHTVCTPKLR-TNGLKYRAPDARVDVSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRL 95
BLAST of EWM25230.1 vs. NCBI_GenBank
Match: gi|813163933|ref|XP_012203027.1| (hypothetical protein SPRG_08401 [Saprolegnia parasitica CBS 223.65] >gi|641532291|gb|KDO26328.1| hypothetical protein SPRG_08401 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 75.485 bits (184), Expect = 1.452e-11 Identity = 63/168 (37.50%), Postives = 84/168 (50.00%), Query Frame = 0 Query: 201 DPQAEHEVFTPSYAAYTPSSRKTHGLSYKSPERRQ--RHVLAPPSSVSRPNVDDALRRVSVVLHQHIATCEGRLARLKALRRRQRQRRRQVRAERKDALRSRRQQLLEESSSHVPRAASPSLSILSSSSSH------SDDELLDDEASLS-TTQEDEVRVLSLFPLVF 359 D E E+F P++ TP R T+GL Y++P R LAPPSSV++PN DD+LRRV+VVL+QHI CE RL L Q AE A E S H R S S + +S H S D++ D+E +S T + VR+ +L PL + Sbjct: 18 DVDIEAELFQPTHTVCTPKLR-TNGLKYRAPGARMDVSETLAPPSSVAKPNYDDSLRRVAVVLYQHIRRCEKRLRETAPLLMSTIQ--SATIAETPVA---------EASQHHALRTESFDASTVHPTSGHLPGLHLSLDKVFDEEHFVSPTYKYTFVRLPTLHPLSY 173
BLAST of EWM25230.1 vs. NCBI_GenBank
Match: gi|669147164|ref|XP_008609144.1| (hypothetical protein SDRG_05218 [Saprolegnia diclina VS20] >gi|530739382|gb|EQC37624.1| hypothetical protein SDRG_05218 [Saprolegnia diclina VS20]) HSP 1 Score: 75.485 bits (184), Expect = 1.621e-11 Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 0 Query: 201 DPQAEHEVFTPSYAAYTPSSRKTHGLSYKSPERRQ--RHVLAPPSSVSRPNVDDALRRVSVVLHQHIATCEGRLARLKALRRRQRQRRRQVRAERKDALRSRRQQLLEESSSHVPRAASPSLSILSSSSSHSDDELLDDEASLS-TTQEDEVRVLSLFPLVF 359 D E E+F P++ TP R T+GL Y++P+ R LAPPSSV++PN DD+LRRV+VVL+QHI CE RL Q + + +A + R + + S+ H P L + S D++ D+E +S T + VR+ +L PL + Sbjct: 23 DVDIEAELFQPTHTVCTPKLR-TNGLKYRAPDARVDVSETLAPPSSVAKPNYDDSLRRVAVVLYQHIRRCEKRLRAPLLGSTIQSATIAEAPSSVAEASHALRTESFDASTVHPTSGHLPGLHL-------SVDKVFDEEHFVSPTYKYTFVRLPTLHPLSY 176
BLAST of EWM25230.1 vs. NCBI_GenBank
Match: gi|698806108|ref|XP_009836083.1| (hypothetical protein H257_11005 [Aphanomyces astaci] >gi|574108920|gb|ETV74425.1| hypothetical protein H257_11005 [Aphanomyces astaci]) HSP 1 Score: 70.4774 bits (171), Expect = 8.440e-10 Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0 Query: 201 DPQAEHEVFTPSYAAYTPSSRKTHGLSYKSPERRQR--HVLAPPSSVSRPNVDDALRRVSVVLHQHIATCEGRL 272 D + E F P++ TP R T+GL Y++P+ R LAPPSSV++PN DD+LRRVSVVL+QHI CE R+ Sbjct: 24 DLEDETRHFQPTHTVCTPRLR-TNGLKYRAPDARVDVSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRM 96
BLAST of EWM25230.1 vs. NCBI_GenBank
Match: gi|673045701|ref|XP_008876811.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574467473|gb|ETV94496.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 68.9366 bits (167), Expect = 1.920e-9 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0 Query: 201 DPQAEHEVFTPSYAAYTPSSRKTHGLSYKSPERRQR--HVLAPPSSVSRPNVDDALRRVSVVLHQHIATCEGRL 272 D + E F P++ TP R T+GL Y++P+ R L PPSSV++PN DD+LRRVSVVL+QHI CE RL Sbjct: 24 DLEDEARHFQPTHTVCTPRLR-TNGLKYRAPDARVDVSETLPPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRL 96
BLAST of EWM25230.1 vs. NCBI_GenBank
Match: gi|673045699|ref|XP_008876810.1| (hypothetical protein H310_11811 [Aphanomyces invadans] >gi|574467472|gb|ETV94495.1| hypothetical protein H310_11811 [Aphanomyces invadans]) HSP 1 Score: 68.9366 bits (167), Expect = 3.363e-9 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0 Query: 201 DPQAEHEVFTPSYAAYTPSSRKTHGLSYKSPERRQR--HVLAPPSSVSRPNVDDALRRVSVVLHQHIATCEGRL 272 D + E F P++ TP R T+GL Y++P+ R L PPSSV++PN DD+LRRVSVVL+QHI CE RL Sbjct: 24 DLEDEARHFQPTHTVCTPRLR-TNGLKYRAPDARVDVSETLPPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRL 96
BLAST of EWM25230.1 vs. NCBI_GenBank
Match: gi|953496396|emb|CEG41996.1| (cyclin-y-like protein [Plasmopara halstedii]) HSP 1 Score: 67.3958 bits (163), Expect = 9.193e-9 Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 0 Query: 208 VFTPSYAAYTPSSRKTHGLSYKSPERRQ--RHVLAPPSSVS---RPNVDDALRRVSVVLHQHIATCEGR 271 VF P++A +TP +T L Y+ P R R LAPP+SVS +PN DD LRRVSVVL+QHI CE R Sbjct: 40 VFQPTHAVFTPKLSETSSLRYRKPNDRVVGRTSLAPPTSVSSIAQPNCDDFLRRVSVVLYQHIRRCEKR 108
BLAST of EWM25230.1 vs. NCBI_GenBank
Match: gi|675213533|ref|XP_008915651.1| (hypothetical protein PPTG_19097 [Phytophthora parasitica INRA-310] >gi|568084094|gb|ETM99037.1| hypothetical protein PPTG_19097 [Phytophthora parasitica INRA-310]) HSP 1 Score: 64.3142 bits (155), Expect = 1.437e-8 Identity = 36/69 (52.17%), Postives = 44/69 (63.77%), Query Frame = 0 Query: 208 VFTPSYAAYTPSSRKTHGLSYKSPERRQ--RHVLAPPSSVS---RPNVDDALRRVSVVLHQHIATCEGR 271 VF P++ +TP +T L Y+ P+ R LAPPSSVS +PN DD LRRVSVVL+QHI CE R Sbjct: 50 VFQPTHTVFTPRLSETSSLRYRKPDDRVVGSTSLAPPSSVSSIAQPNYDDFLRRVSVVLYQHIRRCEKR 118 The following BLAST results are available for this feature:
BLAST of EWM25230.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|