EWM30134.1, cds542 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30134.1 vs. NCBI_GenBank
Match: gi|585112786|gb|EWM30134.1| (DNA helicase DnaB [Nannochloropsis gaditana]) HSP 1 Score: 954.51 bits (2466), Expect = 0.000e+0 Identity = 467/467 (100.00%), Postives = 467/467 (100.00%), Query Frame = 0
Query: 1 MKQKAWQRLYPSPSAGWGLFGLHTVGADAKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVRALPEDLDPPKDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMGDLKSLDAVADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREGGMGGGKGGFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTGTLVEVEDNGLGLSLERESMYGGGGWKSMGGGGGGIGRWFGRKRRIDWRPWMVGGGGEVVR 467
MKQKAWQRLYPSPSAGWGLFGLHTVGADAKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVRALPEDLDPPKDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMGDLKSLDAVADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREGGMGGGKGGFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTGTLVEVEDNGLGLSLERESMYGGGGWKSMGGGGGGIGRWFGRKRRIDWRPWMVGGGGEVVR
Sbjct: 1 MKQKAWQRLYPSPSAGWGLFGLHTVGADAKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVRALPEDLDPPKDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMGDLKSLDAVADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREGGMGGGKGGFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTGTLVEVEDNGLGLSLERESMYGGGGWKSMGGGGGGIGRWFGRKRRIDWRPWMVGGGGEVVR 467
BLAST of EWM30134.1 vs. NCBI_GenBank
Match: gi|219125812|ref|XP_002183166.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405441|gb|EEC45384.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 484.182 bits (1245), Expect = 4.458e-163 Identity = 236/414 (57.00%), Postives = 308/414 (74.40%), Query Frame = 0
Query: 1 MKQKAWQRLYPSPSAGWGLFGLHTVGADAKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVRA----LPEDLDPPKDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMGDL---KSLDAVADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREGGMGGGKGGFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTG 407
+ +K+WQRL P P GWGLFG HTV +A EIILTEGE+DAMAV+QAT R AVSLPNGCRSLP EVLPLLE F +I+LWMDND PG EGAE+FA K+G RT+IV+ +PED PKDANDALL+ L+LE M+++AQ +P R++ F DLR V E+ + DK+ GV S P L ++KGFR+GEMTVLTGPTG+GKTTFL Q+SLDLA G+N LWGSFE++N +LI K+M+Q+ PLP G+ L+A+ADRF +LP FM+FHG S+V++V+DAM+Y YV+D E ++LDN+QFM++ + FD+F DVA+EKFR+FAT+KN+HV LVVHPRKE + +L ++S G+AKATQ+AD V+ILQ R Y++V+KNR++G+LG PL F + TG
Sbjct: 236 VAKKSWQRLDP-PGGGWGLFGFHTVPPEATEIILTEGEYDAMAVWQATGRPAVSLPNGCRSLPPEVLPLLENFAKIILWMDNDGPGQEGAEQFAKKIGLERTYIVKPGKQHVPEDAPLPKDANDALLQGLDLEAMVRDAQPVPHERILTFRDLRSSVLHEIIHPDKYVGVPMTSLPALTNIIKGFRRGEMTVLTGPTGSGKTTFLGQMSLDLAEQGINMLWGSFEIKNTRLIHKLMQQFSREPLPTGEQAVESKLEALADRFERLPFYFMKFHGGSDVDDVLDAMDYAVYVNDVEHIILDNMQFMISRNKNKTST------FDKFDVQDVAIEKFRKFATDKNVHVTLVVHPRKEQEDMKLSMASIYGSAKATQEADTVLILQTDGRRKYIEVKKNRFNGNLGHTPLHFDRLTG 642
BLAST of EWM30134.1 vs. NCBI_GenBank
Match: gi|1072235052|gb|OEU19781.1| (P-loop containing nucleoside triphosphate hydrolase protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 473.396 bits (1217), Expect = 2.644e-158 Identity = 237/419 (56.56%), Postives = 300/419 (71.60%), Query Frame = 0
Query: 1 MKQKAWQRLYPSPSAGWGLFGLHTVGADAKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVRALPEDLDPPKDANDALL-RNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMGD----LKSLDAVADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREGGMGGGKGGFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRH-YLDVRKNRYDGDLGVVPLAFQKQTGTLVEVE 413
+++KAWQRL P P GWGLFGLHT+ DA EI+LTEGE+DAMAV QAT R AVSLPNGCRSLPV+ LPLLERF++I LWMDND PG EGAEKFA KLG RT+IV+ L KDANDALL ++++L ++I+NA P R++ F DLR V EL D++ G S P ++KGFR+GEMTVLTGPTGAGKTTFL Q+SLDLA G N LWGSFE++N +L+ K+M+Q+ LP+ + +A+ADRF LPL FM+FHG S+++EV+DAMEY YV+D E ++LDN+QFM+ G K FD+F D+A+EKFR+FATE N+HV LVVHPRKE +L ISSF G+AKATQ+AD V+I+Q R LD++KNR+DG LG P+ FQ ++G VE E
Sbjct: 222 LEKKAWQRLDP-PGGGWGLFGLHTIPNDATEIVLTEGEYDAMAVSQATGRHAVSLPNGCRSLPVQTLPLLERFDKIYLWMDNDEPGREGAEKFAKKLGVNRTYIVQCL-----EAKDANDALLNKDIDLNQVIENATLTPHDRIVTFKDLRNDVLQELLEPDQYSGTPVPSLPRFTQIIKGFRRGEMTVLTGPTGAGKTTFLGQVSLDLAEQGENVLWGSFEIKNTRLLHKLMKQFSRDSLPVSTEVNAREKFEALADRFETLPLYFMKFHGGSDMDEVLDAMEYAVYVNDVEHIILDNMQFMIT-------RNGKKSSFDKFEVQDLAIEKFRKFATEHNVHVTLVVHPRKEDAAAKLSISSFFGSAKATQEADTVIIIQNDANRRKCLDIKKNRFDGTLGFSPIYFQSKSGRYVEDE 627
BLAST of EWM30134.1 vs. NCBI_GenBank
Match: gi|1210531758|dbj|GAX09725.1| (hypothetical protein FisN_19Lh195 [Fistulifera solaris]) HSP 1 Score: 466.848 bits (1200), Expect = 1.978e-157 Identity = 236/427 (55.27%), Postives = 307/427 (71.90%), Query Frame = 0
Query: 1 MKQKAWQRLYPSPSAGWGLFGLHTV-GAD-AKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVRALPEDL------DPPKDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMGDLKSLDA---VADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREG-GMGGGKGGFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTGTLVEVEDN 415
++ KAWQRL P+ GWG FG HT+ GAD ++ I++TEGE+DAMAV+QAT +VSLPNGCRSLPVEVLPLLE +E+I LWMDND PG EGA F+ K+G R F+V+ E+ D PKDANDALL+ +L+R+I A+ +P +V+ FSDL+ V E+ + +K+EG S P A++KG R+GE+TV+TGPTG+GKTTFL Q+SLDLA G+N LWGSFEV+N +LI K+++Q+ PLP GD S D +A RFG+LPL F++FHG+S +EEV+DAMEY YVHD E +VLDNLQFM+ SR+ G FD+F D+A+EKFR+FATE+N+H+ LVVHPRKE + RLGISS G+AKATQ+ADNV+ILQ+ + YLDVRKNR+ GDLG + F + T E N
Sbjct: 109 LENKAWQRLDPA-GGGWGFFGYHTLDGADKSQPIVVTEGEYDAMAVWQATGIPSVSLPNGCRSLPVEVLPLLEDYEKIYLWMDNDGPGQEGARVFSQKIGLGRCFMVQPTLENTGCLEFADLPKDANDALLQGHDLKRIIMEAKPVPHEQVLSFSDLQDSVLHEILHPEKYEGTKLPSLPKFSAVVKGLRRGELTVVTGPTGSGKTTFLGQMSLDLAEQGVNVLWGSFEVRNTRLIHKLLQQFARQPLPKGDPSSADKLKDIAKRFGELPLHFLKFHGASELEEVLDAMEYAVYVHDCEHIVLDNLQFMI---SRQNLATRSGNSNFDKFDAQDIAIEKFRKFATERNVHLSLVVHPRKEDESSRLGISSIYGSAKATQEADNVLILQKDNQKKYLDVRKNRFSGDLGATEIFFDRATNRYTEAPTN 531
BLAST of EWM30134.1 vs. NCBI_GenBank
Match: gi|1210521625|dbj|GAX19615.1| (hypothetical protein FisN_19Hh195 [Fistulifera solaris]) HSP 1 Score: 466.848 bits (1200), Expect = 1.322e-155 Identity = 236/429 (55.01%), Postives = 307/429 (71.56%), Query Frame = 0
Query: 1 MKQKAWQRLYPSPSAGWGLFGLHTV-GAD-AKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVRALPEDL------DPPKDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMGDLKSLDA---VADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMA---MGSREGGMGGGKGGFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTGTLVEVEDN 415
++ KAWQRL P+ GWG FG HT+ GAD ++ I++TEGE+DAMAV+QAT A+SLPNGCRSLPVEVLPLLE +E+I LWMDND PG EGA F+ K+G R F+V+ E D PKDANDALL+ +L+R+I A+ +P +V+ FSDL+ V E+ + +K+EG S P A++KG R+GE+TV+TGPTG+GKTTFL Q+SLDLA G+N LWGSFEV+N +LI K+++Q+ PLP GD S D +A RFG+LPL F++FHG+S +EEV+DAMEY YVHD E +VLDNLQFM++ + SR G FD+F D+A+EKFR+FATE+N+H+ LVVHPRKE + RLGISS G+AKATQ+ADNV+ILQ+ + YLDVRKNR+ GDLG + F + T E N
Sbjct: 237 LENKAWQRLDPA-GGGWGFFGYHTLDGADKSQPIVVTEGEYDAMAVWQATGIPAISLPNGCRSLPVEVLPLLEDYEKIYLWMDNDGPGQEGARVFSQKIGLGRCFMVQPTLESTGCLEFADLPKDANDALLQGHDLKRIIMEAKPVPHEQVLSFSDLQDSVLHEILHPEKYEGTKLPSLPKFSAVVKGLRRGELTVVTGPTGSGKTTFLGQMSLDLAEQGVNVLWGSFEVRNTRLIHKLLQQFARQPLPRGDPSSADKLKDIAKRFGELPLHFLKFHGASELEEVLDAMEYAVYVHDCEHIVLDNLQFMISRQNLASR-----SGNSNFDKFDAQDIAIEKFRKFATERNVHLSLVVHPRKEDESARLGISSIYGSAKATQEADNVLILQKDNQKKYLDVRKNRFSGDLGATEIFFDRATNRYREAPTN 659
BLAST of EWM30134.1 vs. NCBI_GenBank
Match: gi|224005435|ref|XP_002291678.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220972197|gb|EED90529.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 451.825 bits (1161), Expect = 7.863e-151 Identity = 237/434 (54.61%), Postives = 308/434 (70.97%), Query Frame = 0
Query: 1 MKQKAWQRLYPSPSAGWGLFGLHTVGADAKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVR------ALPEDLDPPKDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMG-------------DLKSLDAVADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREGGMGGGKG-GFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTGTLVEVED 414
+++KAWQRL P G+GLFG HTV DA EII+TEGEFDAMAVYQAT R AVSLPNGCRSLP+EVL LLE F+ + LWMDND PG EGAE FA KLG R +V+ A PE PPKDAN+ALL ++ +++ A LP R+++FSDLR V E+ N +K+ G S PG +L+KGFR+GE+TVLTGPTG+GKTTFL Q SLDL G+N LWGSFE++N +L+ K+++QY LP+G + +L ++AD+F LP+ FM+FHG S+V++V+DAMEY AYVHD E ++LDN+QFM++ S E GKG FD+F D+A+EKFR+FATE N+HV LVVHPRKE + +LG+SSF G+AKATQ+AD V+ILQ R ++DV+KNR+DG +G PL FQ+++G E D
Sbjct: 170 IEKKAWQRL-DPPGGGFGLFGWHTVPHDATEIIITEGEFDAMAVYQATGRPAVSLPNGCRSLPMEVLLLLENFDTVYLWMDNDGPGREGAEMFARKLGVERCLLVQPSGKRGAPPE---PPKDANEALLTGWDINELLEEASELPHERILKFSDLRDQVIHEIINPEKYRGTPIPSLPGFTSLIKGFRRGELTVLTGPTGSGKTTFLGQTSLDLVEQGINVLWGSFEIKNTRLMHKLLQQYMKDVLPVGLAEKDLSVEERQNAMTALTSLADKFESLPMYFMKFHGGSDVDDVLDAMEYAAYVHDVEHIILDNMQFMISRQSVE-----GKGSSFDKFDMQDIAIEKFRKFATEYNVHVTLVVHPRKEDEGAKLGMSSFYGSAKATQEADTVLILQSDGKRKFVDVKKNRFDGTIGHSPLYFQRKSGRYSENPD 594
BLAST of EWM30134.1 vs. NCBI_GenBank
Match: gi|224015275|ref|XP_002297295.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968040|gb|EED86397.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 451.44 bits (1160), Expect = 4.675e-149 Identity = 236/434 (54.38%), Postives = 308/434 (70.97%), Query Frame = 0
Query: 1 MKQKAWQRLYPSPSAGWGLFGLHTVGADAKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVR------ALPEDLDPPKDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMG-------------DLKSLDAVADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREGGMGGGKG-GFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTGTLVEVED 414
+++KAWQRL P G+GLFG HTV +A EII+TEGEFDAMAVYQAT R AVSLPNGCRSLP+EVL LLE F+ + LWMDND PG EGAE FA KLG R +V+ A PE PPKDAN+ALL ++ +++ A LP R+++FSDLR V E+ N +K+ G S PG +L+KGFR+GE+TVLTGPTG+GKTTFL Q SLDL G+N LWGSFE++N +L+ K+++QY LP+G + +L ++AD+F LP+ FM+FHG S+V++V+DAMEY AYVHD E ++LDN+QFM++ S E GKG FD+F D+A+EKFR+FATE N+HV LVVHPRKE + +LG+SSF G+AKATQ+AD V+ILQ R ++DV+KNR+DG +G PL FQ+++G E D
Sbjct: 267 IEKKAWQRL-DPPGGGFGLFGWHTVPHNATEIIITEGEFDAMAVYQATGRPAVSLPNGCRSLPMEVLLLLENFDTVYLWMDNDGPGREGAEMFARKLGVERCLLVQPSGKRGAPPE---PPKDANEALLTGWDINELLEEASELPHERILKFSDLRDQVIHEIINPEKYRGTPIPSLPGFTSLIKGFRRGELTVLTGPTGSGKTTFLGQTSLDLVEQGINVLWGSFEIKNTRLMHKLLQQYMKDVLPVGLAEKDLSVEERQNAMTALTSLADKFESLPMYFMKFHGGSDVDDVLDAMEYAAYVHDVEHIILDNMQFMISRQSVE-----GKGSSFDKFDMQDIAIEKFRKFATEYNVHVTLVVHPRKEDEGAKLGMSSFYGSAKATQEADTVLILQSDGKRKFVDVKKNRFDGTIGHSPLYFQRKSGRYSENPD 691
BLAST of EWM30134.1 vs. NCBI_GenBank
Match: gi|953501133|emb|CEG37503.1| (mitochondrial helicase twinkle [Plasmopara halstedii]) HSP 1 Score: 443.736 bits (1140), Expect = 1.339e-146 Identity = 226/417 (54.20%), Postives = 297/417 (71.22%), Query Frame = 0
Query: 4 KAWQRLYPSPSAGWGLFGLHTVGADAKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVRALPEDLDPP--KDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMGDLKSLDAVADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREGGMGGGKGGFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTGTLVEVEDNGLG 418
KA Q+L P WGLFG +TV A E++LTEGEFDA+AV+QAT AAVSLPNGC+SLP VLPLLERFERI LWMDND G EKFA KLG R +IVR +P + KDANDAL L+L +I A+R+P +++ F +LR V++E+ N K GV +++FP L L+KG R GE+TVLTGPTG GKTT LSQLSLDL G++TLWGSFE++N +L+ KM+ Q L GD+++ +A ADRF LP+ F+RF GS++V+EV+DAMEY Y HD + ++LDN+QFMMA G G+ G+D+F + D A++KFR+FA+ KN+H+ LV+HPRKE + L +SS GTAKATQ+ADNV+ILQR+ G+ LD+RKNR+DG LG +PL F Q+ +L+EV G+
Sbjct: 252 KAKQQLVPK-GGSWGLFGWNTVPTAAHELVLTEGEFDALAVHQATGMAAVSLPNGCQSLPPSVLPLLERFERIYLWMDNDASGQANVEKFAAKLGMARCYIVR-MPVNASSAYLKDANDALRAGLDLSAIINAAERIPHSQITSFQELRRDVYEEIVNPLKACGVQSRAFPSLNRLMKGHRMGEVTVLTGPTGCGKTTLLSQLSLDLCGQGVSTLWGSFEIKNTRLMHKMLTQLAQRNLS-GDVQAFEATADRFEALPMHFLRFFGSTDVDEVLDAMEYAVYAHDVQHILLDNVQFMMA--------GQGR-GYDKFERQDAALDKFRKFASAKNVHLTLVIHPRKEEEDHDLTLSSVFGTAKATQEADNVLILQRNHGKSKLDIRKNRFDGSLGSIPLKFNPQSASLLEVSSEGMS 656
BLAST of EWM30134.1 vs. NCBI_GenBank
Match: gi|923130163|ref|XP_013758547.1| (helicase twinkle [Thecamonas trahens ATCC 50062] >gi|906555189|gb|KNC48432.1| helicase twinkle [Thecamonas trahens ATCC 50062]) HSP 1 Score: 440.654 bits (1132), Expect = 6.886e-145 Identity = 227/427 (53.16%), Postives = 297/427 (69.56%), Query Frame = 0
Query: 1 MKQKAWQRLYPSPSAGWGLFGLHTVGADAKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVR--ALPEDLDP--------PKDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMGDLKSLDAVADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREGGMGGGKGGFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTGTLVEVEDNGL 417
+ K QRL P GW LFG TV +A+E+++TEGE+DAMAV+QAT R AVSLPNG RSLPVEVLP+LERFERI+LWMD+D G+EGAEK A KLG RT++VR P ++ PKDANDAL L+++ ++ +A R+P +++ FSDLR + EL N ++ GV +++ P L +LKG RKGE+T+LTGPTGAGKT+ LSQLSLD A G+ TLWGSFE+ NV+L++KMM+Q + PL L D AD F LP+ FM+F GSS++ V+DAMEY YV+D E +VLDNLQFM + G GK GF+RF +D ++E R+FATE N+H+ LVVHPRK D L SS GTAKATQ+ADNV+I+QR + YLD+RKNR+DGDLG+VP F K T + E++ + +
Sbjct: 312 LSAKHLQRLDPK-GGGWSLFGWQTVPDEARELVVTEGEYDAMAVWQATGRPAVSLPNGARSLPVEVLPMLERFERIVLWMDDDMAGMEGAEKLARKLGVERTYLVRPSGCPAVVEAVAASGGKLPKDANDALRAGLDMDALVVSAARMPHKQIVEFSDLRSEILTELSNPEQACGVQSRTLPALNKVLKGHRKGELTILTGPTGAGKTSILSQLSLDYAAQGVPTLWGSFELSNVRLVKKMMQQLASLPLEH-HLDQFDYWADAFEALPMHFMKFFGSSDIHAVLDAMEYAVYVNDVEHIVLDNLQFMHS--------GQGK-GFERFELLDKSIEALRKFATEHNVHISLVVHPRKVDDDTLLNTSSVFGTAKATQEADNVIIIQRGKKYTYLDIRKNRFDGDLGIVPYTFDKSTCKIRELDADAM 727
BLAST of EWM30134.1 vs. NCBI_GenBank
Match: gi|1214671349|gb|OWY95358.1| (Twinkle protein, partial [Phytophthora megakarya]) HSP 1 Score: 434.491 bits (1116), Expect = 3.846e-144 Identity = 223/415 (53.73%), Postives = 289/415 (69.64%), Query Frame = 0
Query: 4 KAWQRLYPSPSAGWGLFGLHTVGADAKEIILTEGEFDAMAVYQATRRAAVSLPNGCRSLPVEVLPLLERFERILLWMDNDTPGIEGAEKFANKLGARRTFIVRALPEDLDPPKDANDALLRNLNLERMIQNAQRLPDTRVIRFSDLRPLVFDELRNRDKHEGVSAKSFPGLMALLKGFRKGEMTVLTGPTGAGKTTFLSQLSLDLARGGMNTLWGSFEVQNVKLIEKMMRQYHAAPLPMGDLKSLDAVADRFGQLPLMFMRFHGSSNVEEVVDAMEYCAYVHDTELVVLDNLQFMMAMGSREGGMGGGKGGFDRFYQMDVAVEKFRRFATEKNIHVILVVHPRKESDQFRLGISSFSGTAKATQDADNVVILQRHQGRHYLDVRKNRYDGDLGVVPLAFQKQTGTLVEVEDNGLG 418
KA Q+L P WGLFG +TV A E++LTEGEFDAMAV+QAT AAVSLPNGC+SLP VLPLLERF+RI LWMDND G EKFA K+G R +IVR KDANDAL L+L ++ A+R+P +++ F +LR V++E+ N K GV ++SFP L L+KG R GE+TVLTGPTG GKTTFLSQLSLDL G++TLWGSFE++N +L+ KM+ Q L GD+ + +A ADRF LP+ F+RF GS+ V+EV+DAMEY Y +D + ++LDN+QFMMA G G+ GFD+F + D A++KFR+FA+ KN+H+ LV+HPRKE + L +SS GTAKATQ+ADNV+ILQR +G LD+RKNR+DG LG +PL F + +L E G+
Sbjct: 143 KAKQQLVPK-GGSWGLFGWNTVPTAADELVLTEGEFDAMAVHQATGMAAVSLPNGCQSLPPSVLPLLERFKRIYLWMDNDASGQSNVEKFAAKVGMTRCYIVRMPATAASSVKDANDALRAGLDLTAIVNAAERMPHSQITTFEELRRDVYEEIVNPLKACGVQSRSFPSLNRLMKGHRMGEVTVLTGPTGCGKTTFLSQLSLDLCGQGVSTLWGSFEIKNTRLMHKMLTQLAQRNLS-GDVNAFEAAADRFEALPMHFLRFFGSTEVDEVLDAMEYAVYAYDVQHILLDNVQFMMA--------GQGR-GFDKFERQDAALDKFRKFASAKNVHLTLVIHPRKEQEDQDLTLSSVFGTAKATQEADNVLILQRTRGESKLDIRKNRFDGTLGSIPLKFDPDSASLREFGSEGMS 546 The following BLAST results are available for this feature:
BLAST of EWM30134.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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