EWM25260.1, cds5413 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25260.1 vs. NCBI_GenBank
Match: gi|585106974|gb|EWM25260.1| (conserved oligomeric golgi complex subunit 7, partial [Nannochloropsis gaditana]) HSP 1 Score: 312.768 bits (800), Expect = 1.033e-107 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQDRGEAGGRRGGGRRPRADLGAVTQGEAQHVSMPGHAHGGGALATRRPRGHGALRRGRLGAGEG 159
MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQDRGEAGGRRGGGRRPRADLGAVTQGEAQHVSMPGHAHGGGALATRRPRGHGALRRGRLGAGEG
Sbjct: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQDRGEAGGRRGGGRRPRADLGAVTQGEAQHVSMPGHAHGGGALATRRPRGHGALRRGRLGAGEG 159
BLAST of EWM25260.1 vs. NCBI_GenBank
Match: gi|553189839|ref|XP_005855083.1| (conserved oligomeric golgi complex subunit 7 [Nannochloropsis gaditana CCMP526] >gi|422293977|gb|EKU21277.1| conserved oligomeric golgi complex subunit 7 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 186.422 bits (472), Expect = 2.335e-58 Identity = 97/107 (90.65%), Postives = 97/107 (90.65%), Query Frame = 0
Query: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQDRGEAGGRRGG 107
MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQ RG GG GG
Sbjct: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQV----KRGGGGGLGGG 103
BLAST of EWM25260.1 vs. NCBI_GenBank
Match: gi|972205603|ref|XP_015185032.1| (PREDICTED: conserved oligomeric Golgi complex subunit 7 isoform X2 [Polistes dominula]) HSP 1 Score: 65.0846 bits (157), Expect = 2.569e-9 Identity = 31/97 (31.96%), Postives = 55/97 (56.70%), Query Frame = 0
Query: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQD 97
MD++ FS+ TFDA+ W+ + E DA+VS++ M+LQL Q++N LE + SLPR + + LL+ +L++++ V + K ++
Sbjct: 1 MDVSAFSEDTFDAKEWINKTFKSNEAQ-ENKDAFVSSLVMKLQLYVQQVNSALEETSQSVLSSLPRVLRDSQLLQQEALALKEKMASVKQEIAKVEE 96
BLAST of EWM25260.1 vs. NCBI_GenBank
Match: gi|972205601|ref|XP_015185031.1| (PREDICTED: conserved oligomeric Golgi complex subunit 7 isoform X1 [Polistes dominula]) HSP 1 Score: 65.0846 bits (157), Expect = 2.570e-9 Identity = 31/97 (31.96%), Postives = 55/97 (56.70%), Query Frame = 0
Query: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQD 97
MD++ FS+ TFDA+ W+ + E DA+VS++ M+LQL Q++N LE + SLPR + + LL+ +L++++ V + K ++
Sbjct: 3 MDVSAFSEDTFDAKEWINKTFKSNEAQ-ENKDAFVSSLVMKLQLYVQQVNSALEETSQSVLSSLPRVLRDSQLLQQEALALKEKMASVKQEIAKVEE 98
BLAST of EWM25260.1 vs. NCBI_GenBank
Match: gi|954563937|ref|XP_014605853.1| (PREDICTED: conserved oligomeric Golgi complex subunit 7 isoform X1 [Polistes canadensis]) HSP 1 Score: 65.0846 bits (157), Expect = 2.570e-9 Identity = 31/97 (31.96%), Postives = 55/97 (56.70%), Query Frame = 0
Query: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQD 97
MD++ FS+ TFDA+ W+ + E DA+VS++ M+LQL Q++N LE + SLPR + + LL+ +L++++ V + K ++
Sbjct: 2 MDVSAFSEDTFDAKEWINKTFKSNEAQ-ENKDAFVSSLVMKLQLYVQQVNSALEETSQSVLSSLPRVLRDSQLLQQEALALKEKMASVKQEIAKVEE 97
BLAST of EWM25260.1 vs. NCBI_GenBank
Match: gi|1059235251|ref|XP_017762611.1| (PREDICTED: conserved oligomeric Golgi complex subunit 7 [Eufriesea mexicana]) HSP 1 Score: 63.929 bits (154), Expect = 6.263e-9 Identity = 37/122 (30.33%), Postives = 61/122 (50.00%), Query Frame = 0
Query: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQ-DRGEAGGRRGGGRRPRADLGAVTQG 121
MD++ FS+ TFD + W+ + E DA+VS++ M+LQL Q++NG LE + SLPR + + LL+ +L +++ V + K + D + R + DL QG
Sbjct: 1 MDVSAFSEDTFDVKGWINKTFKSTEAQ-ENKDAFVSSLVMKLQLYVQQVNGALEETSQSVLSSLPRVLRDTQLLQQEALALREKMVAVKQEIEKVEKDTASSMATLEKIDRIKTDLQTAKQG 121
BLAST of EWM25260.1 vs. NCBI_GenBank
Match: gi|952520197|gb|KRT80646.1| (hypothetical protein AMK59_5913 [Oryctes borbonicus]) HSP 1 Score: 63.5438 bits (153), Expect = 7.876e-9 Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 0
Query: 1 MDLAPFSQHTFDARAWVESIL-TPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQ-DRGEA 101
MD+ FS TFD +AWV IL +PE + E + + ++ M+LQL Q++N LE E+ SLP+ + + L+ G+ L++++G V Q K + D G++
Sbjct: 1 MDIGAFSDDTFDTKAWVNEILKSPEGQ--EKKEGFTMSLVMKLQLYVQQINAALEETSQEVFVSLPKIIRDTQSLQEEGQLLQRKMGWVKDQITKIEKDTGDS 101
BLAST of EWM25260.1 vs. NCBI_GenBank
Match: gi|805788412|ref|XP_012141178.1| (PREDICTED: conserved oligomeric Golgi complex subunit 7 isoform X2 [Megachile rotundata] >gi|805788415|ref|XP_012141179.1| PREDICTED: conserved oligomeric Golgi complex subunit 7 isoform X2 [Megachile rotundata]) HSP 1 Score: 63.1586 bits (152), Expect = 1.204e-8 Identity = 38/123 (30.89%), Postives = 64/123 (52.03%), Query Frame = 0
Query: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQDRGEAGGRRGGGR--RPRADLGAVTQG 121
MD++ FS+ TFD + W+ + E DA+VS++ M+LQL Q++NG LE + SLPR + + LL+ +L +++ V Q ++ ++ A R + + DL A QG
Sbjct: 1 MDVSAFSEDTFDVKDWINKTFKSAEAQ-ENKDAFVSSLVMKLQLYVQQVNGALEETSQSVLSSLPRVLRDTQLLQQEAIALSEKMVAV-KQEIEKVEKDTASSMATLERIDKIKTDLQAAKQG 121
BLAST of EWM25260.1 vs. NCBI_GenBank
Match: gi|1153811803|ref|XP_020281658.1| (conserved oligomeric Golgi complex subunit 7 isoform X1 [Pseudomyrmex gracilis]) HSP 1 Score: 62.3882 bits (150), Expect = 2.163e-8 Identity = 31/96 (32.29%), Postives = 53/96 (55.21%), Query Frame = 0
Query: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQELGHVLAQAVKAQ 96
MD++ FS+ TFD + W+ + E DA+VS++ M+LQL Q++NG LE + SLPR + + LL+ +L +++ V + K +
Sbjct: 1 MDVSAFSEETFDVKEWINRTFKSAEAQ-ENKDAFVSSLVMKLQLYVQQVNGALEETSQSVLSSLPRILRDTQLLQQETLALREKMVSVKQEIAKVE 95
BLAST of EWM25260.1 vs. NCBI_GenBank
Match: gi|1059860460|ref|XP_017793947.1| (PREDICTED: conserved oligomeric Golgi complex subunit 7 [Habropoda laboriosa]) HSP 1 Score: 62.003 bits (149), Expect = 2.940e-8 Identity = 29/85 (34.12%), Postives = 49/85 (57.65%), Query Frame = 0
Query: 1 MDLAPFSQHTFDARAWVESILTPEKRDGETLDAYVSAVSMQLQLLAQELNGELERGMMELTGSLPRAMTELCLLETSGRSLEQEL 85
MD++ FS+ TFD + W+ + E DA+VS++ M+LQL Q++NG LE + SLPR + + LL+ +L +++
Sbjct: 1 MDVSAFSEDTFDVKDWINKTFKSTEAQ-ENKDAFVSSLVMKLQLYVQQVNGALEETSQSVLSSLPRVLRDTQLLQQEALALREKM 84 The following BLAST results are available for this feature:
BLAST of EWM25260.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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