EWM25264.1, cds5409 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25264.1 vs. NCBI_GenBank
Match: gi|585106986|gb|EWM25264.1| (vacuolar sorting atpase [Nannochloropsis gaditana]) HSP 1 Score: 239.195 bits (609), Expect = 4.264e-80 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
Query: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDPNVPPCPRCPMVLLTEGGEKQGPLTCQSCGAVRGGLYEIESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDPNVPPCPRCPMVLLTEGGEKQGPLTCQSCGAVRGGLYEIESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG
Sbjct: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDPNVPPCPRCPMVLLTEGGEKQGPLTCQSCGAVRGGLYEIESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
BLAST of EWM25264.1 vs. NCBI_GenBank
Match: gi|298708669|emb|CBJ26156.1| (putative; katanin like protein [Ectocarpus siliculosus]) HSP 1 Score: 97.0561 bits (240), Expect = 2.518e-21 Identity = 53/115 (46.09%), Postives = 67/115 (58.26%), Query Frame = 0
Query: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDPNVPPCPRCPMVLLTEGGEKQGPLTCQSCGAVRGGLYEIESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
MEPLRKC+ AK FV ML P P CP CP L T K G + C +C A+R LYE+ +E+LLVPD+ + DF KA ++ SV+ EEL F +WT +FGQEG
Sbjct: 347 MEPLRKCQMAKQFVPTKDNMLIPAE-------KYPNCPYCPQDLTTRPA-KLGEV-CPTCKAIRTSLYEVATEKLLVPDVCYDDFLKALTKSGSSVSEEELTRFVQWTEDFGQEG 452
BLAST of EWM25264.1 vs. NCBI_GenBank
Match: gi|1173935844|gb|OQR86899.1| (vacuolar protein sorting-associating protein [Achlya hypogyna]) HSP 1 Score: 82.8037 bits (203), Expect = 3.762e-16 Identity = 50/123 (40.65%), Postives = 68/123 (55.28%), Query Frame = 0
Query: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDP--NVPPCPRCPMVLLTEGGEKQG-PLTCQSCGAVRGGLYEI-----ESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
MEPLR C+QA++F+ P +G P + PPCP C M L + G QG C CGA R LY++ ++L P + DF+K + + SVAPEEL+ F +WT+EFGQEG
Sbjct: 338 MEPLRLCQQAQFFM-RCDDKCHPNRNGAFLTPCADDPPCPYCHMKLSSCGSACQGCKAPCARCGAYRMRLYDLPERGFRDDQLKPPMVSMRDFKKVLEHSISSVAPEELNQFIKWTSEFGQEG 459
BLAST of EWM25264.1 vs. NCBI_GenBank
Match: gi|1210519769|dbj|GAX21419.1| (vacuolar protein-sorting-associated protein 4 [Fistulifera solaris]) HSP 1 Score: 82.0333 bits (201), Expect = 6.466e-16 Identity = 44/115 (38.26%), Postives = 64/115 (55.65%), Query Frame = 0
Query: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDPNVPPCPRCPMVLLTEGGEKQGPLTCQSCGAVRGGLYEIESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
M+PLR+C+QAK F + G P P C +CP L ++ K TC+ CGA R L+E+ E+L+ P ++ ADFEK + + +V+ +EL F EWT FGQ+G
Sbjct: 340 MQPLRRCQQAKQFYVDEAGNYHPCD-------QYPSCSKCPPKLSSDPPNKD--YTCRHCGAKRMTLWEVPPEKLVAPPVQRADFEKVMRNSVSTVSDDELQRFVEWTKLFGQDG 445
BLAST of EWM25264.1 vs. NCBI_GenBank
Match: gi|568059662|gb|ETM56234.1| (hypothetical protein L914_00757 [Phytophthora parasitica]) HSP 1 Score: 78.1814 bits (191), Expect = 1.053e-15 Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 0
Query: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDP--NVPPCPRCPMVLLT---EGGEKQGPLTCQSCGAVRGGLYEI-----ESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
MEPLRKC+QA++F T P +G P + PPC C M L T + E + P CQ CGA+R LY++ E+L P I +DF + + + +VA +EL+ F +WT EFGQEG
Sbjct: 70 MEPLRKCQQAQFF-TPCDDKAHPVRNGPFLTPCEDDPPCAYCHMKLSTCRPKCPECKAP--CQRCGALRMRLYDLPERGYSDEKLRPPMISMSDFTRVLEHSTATVASDELNRFVKWTQEFGQEG 191
BLAST of EWM25264.1 vs. NCBI_GenBank
Match: gi|1210515551|dbj|GAX25630.1| (vacuolar protein-sorting-associated protein 4 [Fistulifera solaris]) HSP 1 Score: 80.1073 bits (196), Expect = 2.975e-15 Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 0
Query: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDPNVPPCPRCPMVLLTEGGEKQGPLTCQSCGAVRGGLYEIESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
M+PLR+C+QAK F + G P P C +CP L ++ K TC+ CGA R L+E+ E+L+ P ++ DFEK + + +V+ +EL F EWT FGQ+G
Sbjct: 340 MQPLRRCQQAKQFYVDEAGNYHPCD-------QYPSCSKCPPKLSSDPPNKD--YTCRHCGAKRMTLWEVPPEKLVAPPVQRTDFEKVMRNSVSTVSEDELQRFVEWTKLFGQDG 445
BLAST of EWM25264.1 vs. NCBI_GenBank
Match: gi|673042855|ref|XP_008875388.1| (hypothetical protein H310_10718 [Aphanomyces invadans] >gi|574469061|gb|ETV96077.1| hypothetical protein H310_10718 [Aphanomyces invadans]) HSP 1 Score: 79.7221 bits (195), Expect = 3.538e-15 Identity = 49/123 (39.84%), Postives = 66/123 (53.66%), Query Frame = 0
Query: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDP--NVPPCPRCPMVLLTEGGEKQGPLT-CQSCGAVRGGLYEI-----ESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
MEPLR+C+QA++F P +GT P + PPCP C M L + G T CQ CG+ R LY++ +L P + +F K + + SVAPEEL F +WT+EFGQEG
Sbjct: 339 MEPLRQCQQAQFFC-RCDDKARPTRNGTFLTPCEDDPPCPHCHMKLSSCPSNCTGCKTPCQRCGSYRMRLYDLPDRGFNDSQLKPPMVSMTNFNKVLEHSISSVAPEELHQFVKWTSEFGQEG 460
BLAST of EWM25264.1 vs. NCBI_GenBank
Match: gi|1072232038|gb|OEU16770.1| (AAA-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 79.337 bits (194), Expect = 5.169e-15 Identity = 44/115 (38.26%), Postives = 64/115 (55.65%), Query Frame = 0
Query: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDPNVPPCPRCPMVLLTEGGEKQGPLTCQSCGAVRGGLYEIESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
M+PLR+C++AK FV + G P P C CP L ++ +K TC+ CGAVR L++I E+L P + + DF+ + + SV+P+EL F EWT FGQ+G
Sbjct: 341 MQPLRRCQKAKQFVIDKDGWYIPSE-------KYPSCSSCPPKLSSD--KKGTDYTCKRCGAVRMSLWDIPPEKLQAPMVLYDDFKTVMKSSVSSVSPDELKRFEEWTKLFGQDG 446
BLAST of EWM25264.1 vs. NCBI_GenBank
Match: gi|301095171|ref|XP_002896687.1| (vacuolar protein sorting-associating protein, putative [Phytophthora infestans T30-4] >gi|262108826|gb|EEY66878.1| vacuolar protein sorting-associating protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 78.9518 bits (193), Expect = 8.549e-15 Identity = 49/125 (39.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDP--NVPPCPRCPMVL---LTEGGEKQGPLTCQSCGAVRGGLYEI-----ESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
MEPLRKC+QA++F T P +G P + PPC C M L ++ + + P CQ CGA+R LY++ E+L P I +DF + + +VAP+EL+ F +WT EFGQEG
Sbjct: 339 MEPLRKCQQAQFF-TACNDKARPVRNGQFLTPCEDDPPCAYCHMKLSSCRSKCPDCKAP--CQLCGALRMRLYDLPERGYSDEKLRPPMISMSDFTRVLAHSTATVAPDELNRFVKWTQEFGQEG 460
BLAST of EWM25264.1 vs. NCBI_GenBank
Match: gi|566033847|gb|ETI56758.1| (hypothetical protein F443_00826 [Phytophthora parasitica P1569] >gi|567971537|gb|ETK96543.1| hypothetical protein L915_00777 [Phytophthora parasitica] >gi|567999863|gb|ETL49896.1| hypothetical protein L916_00770 [Phytophthora parasitica] >gi|568029046|gb|ETM02978.1| hypothetical protein L917_00741 [Phytophthora parasitica] >gi|570337542|gb|ETO85490.1| hypothetical protein F444_00845 [Phytophthora parasitica P1976] >gi|570961549|gb|ETP26528.1| hypothetical protein F441_00819 [Phytophthora parasitica CJ01A1] >gi|570998251|gb|ETP54501.1| hypothetical protein F442_00790 [Phytophthora parasitica P10297]) HSP 1 Score: 78.1814 bits (191), Expect = 1.533e-14 Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 0
Query: 1 MEPLRKCKQAKYFVTNAQGMLTPYHSGTGEDP--NVPPCPRCPMVLLT---EGGEKQGPLTCQSCGAVRGGLYEI-----ESERLLVPDIEFADFEKAAQRAKPSVAPEELDHFTEWTTEFGQEG 115
MEPLRKC+QA++F T P +G P + PPC C M L T + E + P CQ CGA+R LY++ E+L P I +DF + + + +VA +EL+ F +WT EFGQEG
Sbjct: 361 MEPLRKCQQAQFF-TPCDDKAHPVRNGPFLTPCEDDPPCAYCHMKLSTCRPKCPECKAP--CQRCGALRMRLYDLPERGYSDEKLRPPMISMSDFTRVLEHSTATVASDELNRFVKWTQEFGQEG 482 The following BLAST results are available for this feature:
BLAST of EWM25264.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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