EWM25269.1, cds5405 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25269.1 vs. NCBI_GenBank
Match: gi|585106998|gb|EWM25268.1| (5-formyltetrahydrofolate cyclo-ligase [Nannochloropsis gaditana] >gi|585106999|gb|EWM25269.1| 5-formyltetrahydrofolate cyclo-ligase [Nannochloropsis gaditana]) HSP 1 Score: 652.129 bits (1681), Expect = 0.000e+0 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
Query: 1 MLRAWGALASIFNPARQYLGLPLTFIATDTFVSLAATRKAFITLQDIQVWESLVPPRERPSGSTCFSRFPRPPSTHLRSFMTSANPPNAGASLSEKKKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPLPPSFSPSLPPLDLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKVYFRKDRERKGEEEEGGVGARRGR 323
MLRAWGALASIFNPARQYLGLPLTFIATDTFVSLAATRKAFITLQDIQVWESLVPPRERPSGSTCFSRFPRPPSTHLRSFMTSANPPNAGASLSEKKKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPLPPSFSPSLPPLDLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKVYFRKDRERKGEEEEGGVGARRGR
Sbjct: 1 MLRAWGALASIFNPARQYLGLPLTFIATDTFVSLAATRKAFITLQDIQVWESLVPPRERPSGSTCFSRFPRPPSTHLRSFMTSANPPNAGASLSEKKKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPLPPSFSPSLPPLDLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKVYFRKDRERKGEEEEGGVGARRGR 323
BLAST of EWM25269.1 vs. NCBI_GenBank
Match: gi|553191142|ref|XP_005855329.1| (5-formyltetrahydrofolate cyclo-ligase [Nannochloropsis gaditana CCMP526] >gi|422293734|gb|EKU21034.1| 5-formyltetrahydrofolate cyclo-ligase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 175.252 bits (443), Expect = 1.339e-51 Identity = 88/98 (89.80%), Postives = 91/98 (92.86%), Query Frame = 0
Query: 81 MTSANPPNAGASLSEKKKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPK 178
MTSAN AGASLSEKKKNLRKSITARLRALDDSYVAAE SRLFPRLLAL++YKDSTCVSLYLSMPAKEVPTFPDLL+ VMTDGKRAE ARDVYVPK
Sbjct: 1 MTSANSSKAGASLSEKKKNLRKSITARLRALDDSYVAAEVSRLFPRLLALDEYKDSTCVSLYLSMPAKEVPTFPDLLEIVMTDGKRAERRARDVYVPK 98
BLAST of EWM25269.1 vs. NCBI_GenBank
Match: gi|873232549|emb|CEM05089.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 177.948 bits (450), Expect = 7.482e-51 Identity = 106/255 (41.57%), Postives = 149/255 (58.43%), Query Frame = 0
Query: 70 PRPPSTHLRSFMTSANPPNAGA--SLSEKKKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPLPPSF----SPSLPPLDLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQM--VASVPVDTFDLPLDAVVTPDKVYFRKDRERKGEEEEGG 316
P PS+ S TS P A + ++SE+KK LR+ + +L++L + +++ +F +L + S CV +YLSMP+ E+ T L++ GKR V+VP+V G P DM M+ +SS ++SSFP+S WGIPE L + +DLV+ PGVAFD RLGHGKGYYD FL+RLFAS GR R TIG+ L EQ+ +A++P+D+ D+ LD VVTPD VY R+GE+ G
Sbjct: 4 PHAPSSARASVSTSDVQPGATSVSAISEQKKALRRQVRGQLKSLSHESIEPQSAAVFAQLSQHPTFVRSQCVCVYLSMPSGEIDTHT-LVREAFRQGKR-------VFVPRVVGKNPPDMRMVEVSSVDEISSFPMSPWGIPELSLDETLRREDGTYCGDIDLVICPGVAFDQSGRRLGHGKGYYDCFLARLFASLKDRGRPRTTTIGIGLREQLLPLATIPMDSLDMFLDWVVTPDGVY-EGAEGRRGEDAAWG 249
BLAST of EWM25269.1 vs. NCBI_GenBank
Match: gi|813103253|ref|XP_012194074.1| (5-formyltetrahydrofolate cyclo-ligase [Saprolegnia parasitica CBS 223.65] >gi|641541962|gb|KDO35707.1| 5-formyltetrahydrofolate cyclo-ligase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 160.229 bits (404), Expect = 2.309e-44 Identity = 98/216 (45.37%), Postives = 128/216 (59.26%), Query Frame = 0
Query: 91 ASLSEKKKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPLP-PSFSPSLPPLD-----LVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKV 300
A + +K LRK I LRAL V A++ L ++AL+ ++ + VS+YL+M A+ + L+ + GKR VYVPKV G DMVML + S ++++FP SKWGIPEPP PS P + LD +VLVPGVAFD +CNRLGHGKGYYD FL R +AS G P+TIG+ALE Q+V +VP D LD V TP +
Sbjct: 3 ADVRSQKAVLRKHIAGLLRALSRDEVVAQSEALAQHVVALDVFRHARSVSVYLAMEAEAKTS--TLVDALFAAGKR-------VYVPKVIGAKSEDMVMLRVDSATEMATFPKSKWGIPEPPSSLPSGRPRIDALDALDVDIVLVPGVAFDPRCNRLGHGKGYYDCFLER-YASR--NGGKLPVTIGIALEAQIVDAVPTSGHDKMLDMVATPQGI 206
BLAST of EWM25269.1 vs. NCBI_GenBank
Match: gi|1173948599|gb|OQR96709.1| (5-formyltetrahydrofolate cyclo-ligase [Achlya hypogyna]) HSP 1 Score: 158.688 bits (400), Expect = 1.053e-43 Identity = 97/211 (45.97%), Postives = 124/211 (58.77%), Query Frame = 0
Query: 96 KKKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPP-LPPSFSPSLPPL-----DLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKV 300
+KK LRK + LRA+ + A+++ L ++AL+ + + CV +YLSM E T P +L + GK+ VYVPKVTG DMVML + S +++SFP SKWGIPEPP L P+ +P + L D+VLVPGVAFD NRLGHGKGYYD F R + G P TIGLAL+ QMV +VP D LD V TP V
Sbjct: 15 QKKALRKQVEGALRAMTPGAIVAQSNALAQHIIALDAIRTAQCVCVYLSME-HEARTAP-ILTQLFAAGKK-------VYVPKVTGMRSEDMVMLQVDSENEMASFPKSKWGIPEPPELLPNGTPRINALDALDIDVVLVPGVAFDAHRNRLGHGKGYYDCFFQRYALRN---GGELPATIGLALDVQMVPAVPTSDHDKVLDMVATPTGV 213
BLAST of EWM25269.1 vs. NCBI_GenBank
Match: gi|669143206|ref|XP_008607165.1| (5-formyltetrahydrofolate cyclo-ligase [Saprolegnia diclina VS20] >gi|530740862|gb|EQC39104.1| 5-formyltetrahydrofolate cyclo-ligase [Saprolegnia diclina VS20]) HSP 1 Score: 157.532 bits (397), Expect = 2.664e-43 Identity = 96/222 (43.24%), Postives = 127/222 (57.21%), Query Frame = 0
Query: 91 ASLSEKKKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPLPPSFSPSLPP------------LDLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKV 300
A + +K LRK I LR L V ++ L ++AL+ ++D+ VS+YL+M A E T + + D A G + +YVPKV G DMVML + S ++++FP SKWGIPEPP PSLP +D+VLVPGVAFD++CNRLGHGKGYYD F R +AS G P+TIG+ALE Q+V +VP D LD V TP +
Sbjct: 3 ADIRSQKTVLRKRIAGLLRTLSRDEVVEQSEALTQHVVALDVFRDARSVSIYLAMEA-EAKT------STLVDALFAAG--KTIYVPKVIGAKSEDMVMLRVDSTAEMTTFPKSKWGIPEPP------PSLPSGLARIDALDALDVDIVLVPGVAFDHRCNRLGHGKGYYDCFFER-YASR--NGGKLPVTIGIALEAQIVDAVPTSGHDKVLDMVATPQGI 206
BLAST of EWM25269.1 vs. NCBI_GenBank
Match: gi|675206575|ref|XP_008912172.1| (5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica INRA-310] >gi|567957678|gb|ETK83277.1| 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica] >gi|567986354|gb|ETL36678.1| 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica] >gi|568087569|gb|ETN02438.1| 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica INRA-310] >gi|570947732|gb|ETP12989.1| 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 151.369 bits (381), Expect = 9.035e-41 Identity = 92/210 (43.81%), Postives = 122/210 (58.10%), Query Frame = 0
Query: 97 KKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPL------PPSFSPSLPPLDLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKV 300
KK LR+ I A L+AL DS V ++ L ++ AL ++ + +S+YL MP KE T LL+ GK+ V+VPK+TG + D++ML +S D+ FP KW IP+PPL P + L+LVL+PGVAFD + RLGHGKGYYDSFL RL + A G P TIGL L Q++ VP+ D LD VVTP +V
Sbjct: 21 KKELRRRIGATLKALPDSEVTEQSRLLAEKICALPEFARARGISVYLEMP-KEAAT-SKLLEAAFAGGKK-------VFVPKITGRSAEDLMMLQATSMDDIRCFPKDKWQIPDPPLLSDTGTPRDDAVQGDELELVLLPGVAFDRQGGRLGHGKGYYDSFLRRLTEHYNAIGHPPPTTIGLCLTPQLIEQVPLAAHDKMLDLVVTPTEV 221
BLAST of EWM25269.1 vs. NCBI_GenBank
Match: gi|566020310|gb|ETI43221.1| (5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica P1569] >gi|568046027|gb|ETM43152.1| 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica] >gi|570323927|gb|ETO71875.1| 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica P1976] >gi|570980409|gb|ETP41092.1| 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica P10297]) HSP 1 Score: 150.984 bits (380), Expect = 1.131e-40 Identity = 92/210 (43.81%), Postives = 122/210 (58.10%), Query Frame = 0
Query: 97 KKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPL------PPSFSPSLPPLDLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKV 300
KK LR+ I A L+AL DS V ++ L ++ AL ++ + +S+YL MP KE T LL+ GK+ V+VPK+TG + D++ML +S D+ FP KW IP+PPL P + L+LVL+PGVAFD + RLGHGKGYYDSFL RL + A G P TIGL L Q++ VP+ D LD VVTP +V
Sbjct: 21 KKELRRRIGATLKALPDSEVTEQSRLLAEKICALPEFARARGISVYLEMP-KEAAT-SKLLEAAFAGGKK-------VFVPKITGRSAEDLMMLQATSMDDIRCFPKDKWQIPDPPLLSDTGTPRDDAVQGDELELVLLPGVAFDRQGGRLGHGKGYYDSFLRRLTERYNAIGHPPPTTIGLCLTPQLIEQVPLAAHDKMLDLVVTPTEV 221
BLAST of EWM25269.1 vs. NCBI_GenBank
Match: gi|695411368|ref|XP_009525455.1| (hypothetical protein PHYSODRAFT_494504 [Phytophthora sojae] >gi|348682922|gb|EGZ22738.1| hypothetical protein PHYSODRAFT_494504 [Phytophthora sojae]) HSP 1 Score: 149.058 bits (375), Expect = 4.873e-40 Identity = 93/210 (44.29%), Postives = 116/210 (55.24%), Query Frame = 0
Query: 97 KKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPL------PPSFSPSLPPLDLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKV 300
K LR+ I A L+ L D V ++ RL R+ AL ++ + VS+YL MP KE T L D K V+VPK+TG + D+ ML S D+ FP KW IP+PPL P + L+LVL+PGVAFD + RLGHGKGYYD FL RL + A G A P TIGL L Q+V VP+ D LD VVTPD+V
Sbjct: 6 KTELRRRIGATLKGLPDEEVLEQSRRLAERVCALPEFARARGVSVYLEMP-KEAATSGLLEAAFAADKK--------VFVPKITGRSAEDLKMLQAKSMGDIRRFPKDKWLIPDPPLLTEGGAPRDDAMQGDELELVLLPGVAFDRRGGRLGHGKGYYDCFLRRLTEYYDAIGHAPPTTIGLCLTPQLVEQVPLAAHDRMLDLVVTPDEV 206
BLAST of EWM25269.1 vs. NCBI_GenBank
Match: gi|568015699|gb|ETL89876.1| (5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica]) HSP 1 Score: 149.443 bits (376), Expect = 4.885e-40 Identity = 91/210 (43.33%), Postives = 121/210 (57.62%), Query Frame = 0
Query: 97 KKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTARDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPL------PPSFSPSLPPLDLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKV 300
KK LR+ I L+AL DS V ++ L ++ AL ++ + +S+YL MP KE T LL+ GK+ V+VPK+TG + D++ML +S D+ FP KW IP+PPL P + L+LVL+PGVAFD + RLGHGKGYYDSFL RL + A G P TIGL L Q++ VP+ D LD VVTP +V
Sbjct: 21 KKELRRRIGVTLKALPDSEVTEQSRLLAEKICALPEFARARGISVYLEMP-KEAAT-SKLLEAAFAGGKK-------VFVPKITGRSAEDLMMLQATSMDDIRCFPKDKWQIPDPPLLSDTGTPRDDAVQGDELELVLLPGVAFDRQGGRLGHGKGYYDSFLRRLTERYNAIGHPPPTTIGLCLTPQLIEQVPLAAHDKMLDLVVTPTEV 221 The following BLAST results are available for this feature:
BLAST of EWM25269.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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