EWM25272.1, cds5401 (CDS) Nannochloropsis gaditana

Overview
NameEWM25272.1
Unique Namecds5401
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:945444..945519 +
Alignment locationCM002465.1:946842..946855 +
Alignment locationCM002465.1:946939..946983 +
Alignment locationCM002465.1:947094..947216 +
Alignment locationCM002465.1:947318..947533 +

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Properties
Property NameValue
Protein idEWM25272.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100473g2.7775.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:945444..945519 +
CM002465.1supercontigCM002465.1:946842..946855 +
CM002465.1supercontigCM002465.1:946939..946983 +
CM002465.1supercontigCM002465.1:947094..947216 +
CM002465.1supercontigCM002465.1:947318..947533 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25272.1 vs. NCBI_GenBank
Match: gi|585107002|gb|EWM25272.1| (hypothetical protein Naga_100473g2 [Nannochloropsis gaditana])

HSP 1 Score: 329.331 bits (843), Expect = 2.102e-114
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 
Query:    1 MGVPWRGNSAYAACRNKEQRNRYSSEFPSARRISLAAHERRTLPEAEKLLVMVSSLPSKREHFKGRKLRHRKRSSEPLSLDISNKTAVFQHDCVQTYSKSGADKADIDGKINLLGLEGQALPPLCHEIGTIMSTCATEMQETFMWVRDAARHGRKKL 157
            MGVPWRGNSAYAACRNKEQRNRYSSEFPSARRISLAAHERRTLPEAEKLLVMVSSLPSKREHFKGRKLRHRKRSSEPLSLDISNKTAVFQHDCVQTYSKSGADKADIDGKINLLGLEGQALPPLCHEIGTIMSTCATEMQETFMWVRDAARHGRKKL
Sbjct:    1 MGVPWRGNSAYAACRNKEQRNRYSSEFPSARRISLAAHERRTLPEAEKLLVMVSSLPSKREHFKGRKLRHRKRSSEPLSLDISNKTAVFQHDCVQTYSKSGADKADIDGKINLLGLEGQALPPLCHEIGTIMSTCATEMQETFMWVRDAARHGRKKL 157
The following BLAST results are available for this feature:
BLAST of EWM25272.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107002|gb|EWM25272.1|2.102e-114100.00hypothetical protein Naga_100473g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5414rna5414Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications