EWM25274.1, cds5399 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25274.1 vs. NCBI_GenBank
Match: gi|585107006|gb|EWM25274.1| (zinc finger protein zpr1 [Nannochloropsis gaditana]) HSP 1 Score: 362.459 bits (929), Expect = 1.115e-126 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 Query: 1 MVNPPQDPAFVAETSKEGKEEGKPDVQGAVQGGTPQRGQSTPLILQDLSKTMGDDDNGIMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEGRRE 181 MVNPPQDPAFVAETSKEGKEEGKPDVQGAVQGGTPQRGQSTPLILQDLSKTMGDDDNGIMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEGRRE Sbjct: 1 MVNPPQDPAFVAETSKEGKEEGKPDVQGAVQGGTPQRGQSTPLILQDLSKTMGDDDNGIMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEGRRE 181
BLAST of EWM25274.1 vs. NCBI_GenBank
Match: gi|698781441|ref|XP_009823764.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574121486|gb|ETV86963.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 147.132 bits (370), Expect = 2.811e-39 Identity = 78/174 (44.83%), Postives = 110/174 (63.22%), Query Frame = 0 Query: 8 PAFVAETSKEGKEEGKPDVQGAVQGGTPQRGQSTPLILQDLSKTMGDDDNGIMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEGRRE 181 PA + T+ + D++ + T Q +T ++ + DD I E+ QSLC+ C E G T+++LT+IP+FREVI+ SF C+ CG+ N+EVQFGG I+E+G R EL V EDLNRQ+IKSDT I+ PE++LEIP KTQ+G++NTI EG EG +E + E Sbjct: 6 PAALGGTTTNKGDRVHLDIEEGDKAATTQDDDTTQ---SEMFSDINDDTPNITEL-QSLCINCHEDGMTKLLLTRIPYFREVILMSFACEHCGFKNSEVQFGGTIQEKGVRMELAVQTREDLNRQLIKSDTAVIVFPEIDLEIPAKTQQGTINTI--EGFIAKAIEGLRENQEE 173 HSP 2 Score: 83.1889 bits (204), Expect = 1.452e-15 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 0 Query: 67 CMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTI 162 C +C + G + M +T IP F+EVI+ +F C+ CG+ NEV+ GG I G R L V + L+R V+KSD+ + IPE+ELE+ + G TI Sbjct: 292 CHSCFKDGESMMCITDIPHFKEVIIMAFNCEHCGFKTNEVKAGGAIPPFGERMVLHVQDASYLDRDVLKSDSACVHIPEIELEMMSGSLGGLYTTI 387
BLAST of EWM25274.1 vs. NCBI_GenBank
Match: gi|698781437|ref|XP_009823762.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|698781439|ref|XP_009823763.1| hypothetical protein, variant 3 [Aphanomyces astaci] >gi|574121487|gb|ETV86964.1| hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574121488|gb|ETV86965.1| hypothetical protein, variant 3 [Aphanomyces astaci]) HSP 1 Score: 146.362 bits (368), Expect = 3.142e-39 Identity = 78/174 (44.83%), Postives = 110/174 (63.22%), Query Frame = 0 Query: 8 PAFVAETSKEGKEEGKPDVQGAVQGGTPQRGQSTPLILQDLSKTMGDDDNGIMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEGRRE 181 PA + T+ + D++ + T Q +T ++ + DD I E+ QSLC+ C E G T+++LT+IP+FREVI+ SF C+ CG+ N+EVQFGG I+E+G R EL V EDLNRQ+IKSDT I+ PE++LEIP KTQ+G++NTI EG EG +E + E Sbjct: 6 PAALGGTTTNKGDRVHLDIEEGDKAATTQDDDTTQ---SEMFSDINDDTPNITEL-QSLCINCHEDGMTKLLLTRIPYFREVILMSFACEHCGFKNSEVQFGGTIQEKGVRMELAVQTREDLNRQLIKSDTAVIVFPEIDLEIPAKTQQGTINTI--EGFIAKAIEGLRENQEE 173
BLAST of EWM25274.1 vs. NCBI_GenBank
Match: gi|635365349|emb|CCI46297.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 149.058 bits (375), Expect = 4.392e-39 Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 0 Query: 51 TMGDDDNGIMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTI 162 T D D + I +SLCM C E+G T ++LT IP+FRE+I+ SFEC+ CG+ N+EVQFGG I+E+GC+ E V DLNRQ+IK+DT ++ PELE EIPPKTQRG++NTI Sbjct: 36 TAEDHDEHNVTIMESLCMHCKENGNTSLLLTSIPYFREIILMSFECEHCGFRNSEVQFGGTIQEKGCKIEFHVENASDLNRQIIKADTATVFFPELEFEIPPKTQRGTINTI 147 HSP 2 Score: 91.6633 bits (226), Expect = 2.291e-18 Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 0 Query: 67 CMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKV---MEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEG 178 C +C G RM +T IP F+EVI+ +F C+ CG+ +NEV+ GG I G R L+ ++PE LNR ++KSD+ S++IPELELE+ + G T+ EG + R+ +EG Sbjct: 280 CHSCQTKGNARMCVTDIPHFKEVIIMAFNCEHCGFRSNEVKAGGSIPSFGERITLRADISLDPEVLNRDILKSDSASVVIPELELELVHGSLGGLYTTV--EGLLDRIRQNIEEG 392
BLAST of EWM25274.1 vs. NCBI_GenBank
Match: gi|698781435|ref|XP_009823761.1| (hypothetical protein H257_01984 [Aphanomyces astaci] >gi|574121485|gb|ETV86962.1| hypothetical protein H257_01984 [Aphanomyces astaci]) HSP 1 Score: 146.747 bits (369), Expect = 3.118e-38 Identity = 78/174 (44.83%), Postives = 110/174 (63.22%), Query Frame = 0 Query: 8 PAFVAETSKEGKEEGKPDVQGAVQGGTPQRGQSTPLILQDLSKTMGDDDNGIMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEGRRE 181 PA + T+ + D++ + T Q +T ++ + DD I E+ QSLC+ C E G T+++LT+IP+FREVI+ SF C+ CG+ N+EVQFGG I+E+G R EL V EDLNRQ+IKSDT I+ PE++LEIP KTQ+G++NTI EG EG +E + E Sbjct: 6 PAALGGTTTNKGDRVHLDIEEGDKAATTQDDDTTQ---SEMFSDINDDTPNITEL-QSLCINCHEDGMTKLLLTRIPYFREVILMSFACEHCGFKNSEVQFGGTIQEKGVRMELAVQTREDLNRQLIKSDTAVIVFPEIDLEIPAKTQQGTINTI--EGFIAKAIEGLRENQEE 173 HSP 2 Score: 83.5741 bits (205), Expect = 1.578e-15 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 0 Query: 67 CMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTI 162 C +C + G + M +T IP F+EVI+ +F C+ CG+ NEV+ GG I G R L V + L+R V+KSD+ + IPE+ELE+ + G TI Sbjct: 292 CHSCFKDGESMMCITDIPHFKEVIIMAFNCEHCGFKTNEVKAGGAIPPFGERMVLHVQDASYLDRDVLKSDSACVHIPEIELEMMSGSLGGLYTTI 387
BLAST of EWM25274.1 vs. NCBI_GenBank
Match: gi|325188918|emb|CCA23447.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 145.976 bits (367), Expect = 4.531e-38 Identity = 65/117 (55.56%), Postives = 89/117 (76.07%), Query Frame = 0 Query: 46 QDLSKTMGDDDNGIMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTI 162 +DL + D +ME SLCM CG++G T ++LT IP+FRE+I+ SFEC+ CG+ N+EVQFGG I+E+GC+ E V + DLNRQ+IK+D+ +++ PELE EIPPKTQRGS+NTI Sbjct: 34 EDLCEDQDGQDVTVME---SLCMHCGDNGVTTLLLTFIPYFREIILMSFECEHCGYRNSEVQFGGTIQEQGCKIEFVVEKASDLNRQIIKADSATVIFPELEFEIPPKTQRGSINTI 147 HSP 2 Score: 93.2041 bits (230), Expect = 6.042e-19 Identity = 49/115 (42.61%), Postives = 71/115 (61.74%), Query Frame = 0 Query: 67 CMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKV---MEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEG 178 C +C G TRM +T IP F+EVI+ +F C+ CG+ NEV+ GG I G R L+ ++PE LNR ++KSD+ S++IPELELE+ + G T+ EG + R+ +EG Sbjct: 280 CHSCQAKGNTRMCVTDIPHFKEVIIMAFNCEHCGFRTNEVKAGGSIPSFGERITLRADISLDPEVLNRDILKSDSASVVIPELELELVHGSLGGLYTTV--EGLLDRIRQNIEEG 392
BLAST of EWM25274.1 vs. NCBI_GenBank
Match: gi|953493318|emb|CEG44394.1| (zinc finger protein zpr1 [Plasmopara halstedii]) HSP 1 Score: 142.895 bits (359), Expect = 9.487e-37 Identity = 69/121 (57.02%), Postives = 89/121 (73.55%), Query Frame = 0 Query: 64 QSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGRE---GGKEGRRE 181 +SLCM C E GTT+++LT IP+FREVI+ SFEC+ CG+ N+EVQFGG+++E+G R ELK+ +PEDLNRQ+IK D G I P L+ EIP TQRGS+NTI EG + E +E RRE Sbjct: 53 ESLCMNCHEDGTTKLLLTMIPYFREVILMSFECEHCGFRNSEVQFGGKVQEQGARIELKLTQPEDLNRQLIKGDAGMIYFPSLDFEIPRGTQRGSINTI--EGVLQKAIEDLRASQEHRRE 171 HSP 2 Score: 85.1149 bits (209), Expect = 4.100e-16 Identity = 46/123 (37.40%), Postives = 74/123 (60.16%), Query Frame = 0 Query: 59 IMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKV---MEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEG 178 +++IP C AC G + M +T IP F+EVI+ SF C++CG+ NEV+ GG I +G R LKV +P ++R ++K+D+ + IPE+ELE+ + G T+ EG + R+ ++G Sbjct: 277 VIQIPAD-CYACQAPGVSCMCMTDIPHFKEVIIMSFNCEACGFKTNEVKAGGAIPPQGERITLKVDPHKDPHVMDRDILKADSACVNIPEIELEMAHGSLGGLYTTV--EGLLDKVRQNIEDG 396
BLAST of EWM25274.1 vs. NCBI_GenBank
Match: gi|299470135|emb|CBN78164.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 143.28 bits (360), Expect = 1.002e-36 Identity = 67/105 (63.81%), Postives = 79/105 (75.24%), Query Frame = 0 Query: 58 GIMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTI 162 G EI S+CM CG GTTRM+ TKIPFFREVI+SSFECD C W NNEV FGGE++E+GC FEL V EDLNRQVIKSD ++ E+E +IPP+ QRG V T+ Sbjct: 47 GADEITGSMCMVCGGDGTTRMLTTKIPFFREVILSSFECDDCHWRNNEVVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPR-QRGEVTTV 150 HSP 2 Score: 80.8777 bits (198), Expect = 1.249e-14 Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 0 Query: 67 CMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEG 178 C ACG G + L +IP F+EV++ +F C+SCG+ ++EV+ GG I +G + L+ + +D R V+KSDT + IP+LEL + T T+ EG E R EG Sbjct: 311 CPACGAPGHSLTCLAEIPHFKEVVIMAFNCESCGFKSSEVKGGGAIPPKGTAYTLEAVSKDDFRRDVLKSDTAVLEIPQLELVMEMGTLGSMYTTV--EGLLEKARTSLVEG 420
BLAST of EWM25274.1 vs. NCBI_GenBank
Match: gi|1173941719|gb|OQR90832.1| (hypothetical protein ACHHYP_05198 [Achlya hypogyna]) HSP 1 Score: 143.665 bits (361), Expect = 1.903e-36 Identity = 68/144 (47.22%), Postives = 100/144 (69.44%), Query Frame = 0 Query: 24 PDVQGAVQGGTPQRGQSTPLILQD-----LSKTMGDDDNGIMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTI 162 P +Q + G T + L ++D + + D+ + EI +SLC+ C ++G T+++LT+IP+FREVI+ SFEC+ CG+ N+E+QFGG I+E+G R EL+V EDLNRQ+IKSDT S+ PE++ EIP KTQ+GS+NTI Sbjct: 436 PAIQAPLGGTTTNTAERVHLDIEDGGAEEIFTDINDEVPNVTEI-ESLCINCHDNGMTKLLLTRIPYFREVILMSFECEHCGFKNSEIQFGGTIQEQGVRMELQVTTREDLNRQLIKSDTASVYFPEIDFEIPAKTQQGSINTI 578 HSP 2 Score: 82.8037 bits (203), Expect = 3.415e-15 Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 0 Query: 67 CMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPED----LNRQVIKSDTGSILIPELELEIPPKTQRGSVNTI 162 C AC + G + M +T IP F+EVI+ +F C+ CG+ NEV+ GG I G R L+V P D ++R ++KSD+ S+ IPELELE+ P + G T+ Sbjct: 714 CHACYKDGESMMCVTDIPHFKEVIIMAFNCEHCGFKTNEVKAGGAIPPFGERIVLRV--PGDDASFMDRDILKSDSASVSIPELELEMMPGSLGGLYTTL 811
BLAST of EWM25274.1 vs. NCBI_GenBank
Match: gi|470445765|ref|XP_004339882.1| (nucleolar zincfinger protein [Acanthamoeba castellanii str. Neff] >gi|440796763|gb|ELR17869.1| nucleolar zincfinger protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 139.813 bits (351), Expect = 6.698e-36 Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = 0 Query: 64 QSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTIGREGGREGGREGGKEGRRE 181 +SLCM C E+G T ++LTKIP F+E+I+ SF C CG+ NNE+QFGG I ERGC ++L V + DLNRQV+KSD SI IPEL+ EIPP TQ+G++NTI EG EG +G+ E Sbjct: 29 ESLCMNCHENGMTNLLLTKIPSFKEIILMSFHCKHCGFRNNEIQFGGSIAERGCIYKLVVTDKGDLNRQVVKSDAASIYIPELDFEIPPLTQKGTLNTI--EGFLMQAIEGLNQGQEE 144 HSP 2 Score: 102.064 bits (253), Expect = 4.906e-22 Identity = 46/104 (44.23%), Postives = 71/104 (68.27%), Query Frame = 0 Query: 59 IMEIPQSLCMACGESGTTRMILTKIPFFREVIVSSFECDSCGWTNNEVQFGGEIKERGCRFELKVMEPEDLNRQVIKSDTGSILIPELELEIPPKTQRGSVNTI 162 +M+ P++ C CG+ G TRM + IP F++VI+ +F C++CG+ +NEV+ GG I +GC+ L++ +DLNR V+KS+T + IPELEL + P T G +TI Sbjct: 267 VMKFPET-CGLCGKRGETRMCVAHIPHFKDVIIMAFMCEACGYKSNEVKSGGAIAPKGCKITLRLTNADDLNRDVLKSETAGLEIPELELGLVPGTLGGKFSTI 369 The following BLAST results are available for this feature:
BLAST of EWM25274.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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