EWM25275.1, cds5398 (CDS) Nannochloropsis gaditana

Overview
NameEWM25275.1
Unique Namecds5398
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:938836..939349 +
Alignment locationCM002465.1:939391..939428 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25275.1
Productmethyltransferase
Orig transcript idgnl|cribi|Naga_102327g1.5092.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:938836..939349 +
CM002465.1supercontigCM002465.1:939391..939428 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0032259methylation
Vocabulary: INTERPRO
TermDefinition
IPR007213LCM_MeTrfase
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|585107008|gb|EWM25275.1| (methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 355.525 bits (911), Expect = 6.539e-124
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query:    1 MNPEDRRGRREKVTQVLILGSGMDTRAWRLPLPDVTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGMRRRRGPGFF 183
            MNPEDRRGRREKVTQVLILGSGMDTRAWRLPLPDVTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGMRRRRGPGFF
Sbjct:    1 MNPEDRRGRREKVTQVLILGSGMDTRAWRLPLPDVTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGMRRRRGPGFF 183          
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|551556614|ref|XP_005765420.1| (hypothetical protein EMIHUDRAFT_247199 [Emiliania huxleyi CCMP1516] >gi|485615380|gb|EOD12991.1| hypothetical protein EMIHUDRAFT_247199 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 79.337 bits (194), Expect = 2.301e-14
Identity = 57/155 (36.77%), Postives = 78/155 (50.32%), Query Frame = 0
Query:   13 VTQVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGS-VIGISLV 165
             TQVL+LGSG+DTRAWRLPL + VTV EVDV      K E L  +++++    P    ++       + L     K R+ + A+           S + W + V       E+P  IL EGLLMYLP+  V E L +  R   APGS  +G + V
Sbjct:   88 CTQVLLLGSGLDTRAWRLPLGEGVTVFEVDVACAHEFKRERLAEIEQEQ----PIRDGTTESHAKKLAHLRGAKCK-RVEVDADL----------SEARWGRLVADAGFDMERPAFILAEGLLMYLPDKDVTEGLFKQVRGLMAPGSWFMGCAFV 227          
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|551620317|ref|XP_005790736.1| (hypothetical protein EMIHUDRAFT_224681 [Emiliania huxleyi CCMP1516] >gi|485644360|gb|EOD38307.1| hypothetical protein EMIHUDRAFT_224681 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 78.1814 bits (191), Expect = 3.007e-14
Identity = 56/155 (36.13%), Postives = 78/155 (50.32%), Query Frame = 0
Query:   13 VTQVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGS-VIGISLV 165
             TQ+L+LGSG+DTRAWRLPL + VTV EVDV      K E L  +++++    P    ++       + L     K R+ + A+           S + W + V       E+P  IL EGLLMYLP+  V E L +  R   APGS  +G + V
Sbjct:   52 CTQLLLLGSGLDTRAWRLPLGEGVTVFEVDVACAHEFKRERLAEIEQEQ----PIRDGTTESHAKKLAHLRGAKCK-RVEVDADL----------SEARWGRLVADAGFDMERPAFILAEGLLMYLPDKDVTEGLFKQVRGLMAPGSWFMGCAFV 191          
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|1129214928|gb|OLQ15580.1| (hypothetical protein AK812_SmicGene227 [Symbiodinium microadriaticum])

HSP 1 Score: 72.4034 bits (176), Expect = 1.311e-11
Identity = 58/173 (33.53%), Postives = 84/173 (48.55%), Query Frame = 0
Query:    9 RREKVTQVLILGSGMDTRAWRLPLPDVTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTAT---TPPSLPSSPSS---WVQAVRAGLP-APEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGM 174
            R +   Q+++LG+GMD+RA+RL  P++ V EVD+P +   KE +L        Q  P                  ++V +R V+P +F++T   T   L  SPS    W +A++   P  P  P V LLEGL+MYL E      L + G +  APGS I    V    VK  +
Sbjct:  920 RSKPCRQLVLLGAGMDSRAFRLRFPELRVFEVDLPILFDEKEPLL--------QDEP------------------ISVFSRTVVPTDFSSTDDWTSKLLSFSPSQVGPWARALKNDAPFDPSVPTVWLLEGLMMYLTEREATATLRRVGALS-APGSSIFFDAVSAAYVKQNI 1065          
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|1055154364|ref|WP_066901366.1| (SAM-dependent methyltransferase [Mycobacterium houstonense])

HSP 1 Score: 68.5514 bits (166), Expect = 1.636e-10
Identity = 57/173 (32.95%), Postives = 79/173 (45.66%), Query Frame = 0
Query:   10 REKVTQVLILGSGMDTRAWRLPLPDVTVI-EVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLV------DRESVKMGMR 175
            R  + Q +IL +G+D+RA+RLP PD TV+ EVD P VVR K + L  L                   +P + L  +++  R   PA   A      PS P++W+                  EGLL YLP DA   +L Q   +  APGS +G+  V      D ES++  MR
Sbjct:  102 RAGIRQAVILAAGLDSRAYRLPWPDGTVVYEVDQPEVVRFKTDTLAELG-----------------AAPTTDLRTVSMDLRFDWPAALIAAGFD--PSVPTAWIA-----------------EGLLGYLPGDAQDRLLDQVTEL-SAPGSRLGVEGVPATETNDEESIRARMR 237          
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|1111728610|gb|OJJ15112.1| (hypothetical protein BI308_24570 [Roseofilum reptotaenium AO1-A])

HSP 1 Score: 67.3958 bits (163), Expect = 2.962e-10
Identity = 50/172 (29.07%), Postives = 78/172 (45.35%), Query Frame = 0
Query:   13 VTQVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGMRRRRGPGFF 183
            +TQ++ILG+GMD RA+RLPLPD  T+ E+D   V+ AKE   + ++               P+++            R  I A+ T             W   +      PE P V ++EGLLMYL E  V ++L     +  AP S++G  ++ +  +     R    G+F
Sbjct:   81 LTQIVILGAGMDARAFRLPLPDKTTLYELDQAEVIEAKESYFQHIE---------------PQVN------------RQAIAADLT-----------QPWKALLLEQGYQPENPTVWIMEGLLMYLTETEVHQLLQTLSDLS-APESILGCDMLGKAGIDYAPYR----GYF 209          
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|302446572|gb|EFL18388.1| (predicted protein [Streptomyces sp. C])

HSP 1 Score: 67.0106 bits (162), Expect = 4.929e-10
Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 0
Query:    6 RRGRREKVTQVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGMRR 176
            R  +   + QV+ L +GMDTR +RLP PD VTV E+D PA++ AK E+L       G+   P+P+                 + R+ +P + T             W   +       ++P++ ++EGLL +LPEDAV+ +++   R   APGSV+   ++ + +++  + R
Sbjct:   68 RTVQEHGIRQVVFLAAGMDTRFYRLPWPDGVTVYELDRPALLEAKAEMLA------GE---PAPAG----------------RTRVTVPVDLT-----------QDWTGPLEDAGWRADQPVLWVVEGLLFFLPEDAVRGLISTLARHS-APGSVLLGDVISKAALQNPLSR 202          
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|746791763|gb|KIF02681.1| (methyltransferase [Streptomyces sp. RSD-27])

HSP 1 Score: 66.6254 bits (161), Expect = 5.900e-10
Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 0
Query:    6 RRGRREKVTQVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVL-TQAGRMGEAPGSVIGISLVDRESVKMGMRR 176
            R  +   + QV+ L +GMDTR +RLP PD V+V E+D PA++ AK E+L       G+   P P+                 + R+ +P + T             W   +      P++P++ ++EGLL +LPE AV+ ++ T AGR   APGSV+   ++ R +++  + R
Sbjct:   68 RTVQEHGIRQVVFLAAGMDTRFYRLPWPDGVSVYELDRPALLEAKAEMLA------GE---PQPAG----------------RTRVAVPVDLT-----------QDWTGPLEEAGWRPDEPVLWVVEGLLFFLPEAAVRNLISTLAGR--SAPGSVLLGDVISRSALENPLSR 202          
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|558871952|ref|WP_023527650.1| (SAM-dependent methyltransferase [Streptomycetaceae bacterium MP113-05] >gi|558548969|gb|EST39297.1| hypothetical protein N566_02730 [Streptomycetaceae bacterium MP113-05])

HSP 1 Score: 65.855 bits (159), Expect = 1.154e-9
Identity = 51/152 (33.55%), Postives = 71/152 (46.71%), Query Frame = 0
Query:   15 QVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLV 165
            Q+++  SGMDTR +RLP    V + E+D PAV+ AKE  L+          P  P  +                 R+ +PA+               W   + A    P+ P V LLEGLL Y+PEDA +EVL++  R+  APGS +   LV
Sbjct:   96 QIVMAASGMDTRPYRLPWAAPVRLFELDRPAVLDAKEAALRD--------APVHPHVT-----------------RVTVPADLLQ----------DDWTDDLCAAGYRPDVPSVWLLEGLLYYIPEDAAREVLSRVSRL-TAPGSEVAADLV 211          
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|552848157|ref|XP_005852039.1| (hypothetical protein CHLNCDRAFT_133008 [Chlorella variabilis] >gi|307111703|gb|EFN59937.1| hypothetical protein CHLNCDRAFT_133008 [Chlorella variabilis])

HSP 1 Score: 66.2402 bits (160), Expect = 1.443e-9
Identity = 54/175 (30.86%), Postives = 83/175 (47.43%), Query Frame = 0
Query:   15 QVLILGSGMDTRAWRLPLP-DVTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPP---SSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGIS----LVDRESVKMGMRRRRGPG 181
            Q+++LG+GMD+R WR+ LP D+   E+D   VV AK  +L +L  +  +      +   P +SP    S L + T    +  P    +    +   S  +W +A+      P KP V + EGLLMYL E  V+ +L +   + E     IG+S    ++DR        R RG G
Sbjct:  151 QLVMLGTGMDSRPWRMKLPADLAWFELDQGDVVGAKRALLHQLAAEVPEPEERVEAQEEP-MSPKFVDSGLARHTSIDEVQFPLRCGSWAAVACDLSDPAWSEALVGAGFDPRKPTVWVAEGLLMYLEESKVQGMLRKVAELSEEGSVFIGLSVTLAVIDR-------LRARGKG 317          
The following BLAST results are available for this feature:
BLAST of EWM25275.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107008|gb|EWM25275.1|6.539e-124100.00methyltransferase [Nannochloropsis gaditana][more]
gi|551556614|ref|XP_005765420.1|2.301e-1436.77hypothetical protein EMIHUDRAFT_247199 [Emiliania ... [more]
gi|551620317|ref|XP_005790736.1|3.007e-1436.13hypothetical protein EMIHUDRAFT_224681 [Emiliania ... [more]
gi|1129214928|gb|OLQ15580.1|1.311e-1133.53hypothetical protein AK812_SmicGene227 [Symbiodini... [more]
gi|1055154364|ref|WP_066901366.1|1.636e-1032.95SAM-dependent methyltransferase [Mycobacterium hou... [more]
gi|1111728610|gb|OJJ15112.1|2.962e-1029.07hypothetical protein BI308_24570 [Roseofilum repto... [more]
gi|302446572|gb|EFL18388.1|4.929e-1029.07predicted protein [Streptomyces sp. C][more]
gi|746791763|gb|KIF02681.1|5.900e-1030.64methyltransferase [Streptomyces sp. RSD-27][more]
gi|558871952|ref|WP_023527650.1|1.154e-933.55SAM-dependent methyltransferase [Streptomycetaceae... [more]
gi|552848157|ref|XP_005852039.1|1.443e-930.86hypothetical protein CHLNCDRAFT_133008 [Chlorella ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5411rna5411Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications