EWM25275.1, cds5398 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|585107008|gb|EWM25275.1| (methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 355.525 bits (911), Expect = 6.539e-124 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query: 1 MNPEDRRGRREKVTQVLILGSGMDTRAWRLPLPDVTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGMRRRRGPGFF 183
MNPEDRRGRREKVTQVLILGSGMDTRAWRLPLPDVTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGMRRRRGPGFF
Sbjct: 1 MNPEDRRGRREKVTQVLILGSGMDTRAWRLPLPDVTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGMRRRRGPGFF 183
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|551556614|ref|XP_005765420.1| (hypothetical protein EMIHUDRAFT_247199 [Emiliania huxleyi CCMP1516] >gi|485615380|gb|EOD12991.1| hypothetical protein EMIHUDRAFT_247199 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 79.337 bits (194), Expect = 2.301e-14 Identity = 57/155 (36.77%), Postives = 78/155 (50.32%), Query Frame = 0
Query: 13 VTQVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGS-VIGISLV 165
TQVL+LGSG+DTRAWRLPL + VTV EVDV K E L +++++ P ++ + L K R+ + A+ S + W + V E+P IL EGLLMYLP+ V E L + R APGS +G + V
Sbjct: 88 CTQVLLLGSGLDTRAWRLPLGEGVTVFEVDVACAHEFKRERLAEIEQEQ----PIRDGTTESHAKKLAHLRGAKCK-RVEVDADL----------SEARWGRLVADAGFDMERPAFILAEGLLMYLPDKDVTEGLFKQVRGLMAPGSWFMGCAFV 227
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|551620317|ref|XP_005790736.1| (hypothetical protein EMIHUDRAFT_224681 [Emiliania huxleyi CCMP1516] >gi|485644360|gb|EOD38307.1| hypothetical protein EMIHUDRAFT_224681 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 78.1814 bits (191), Expect = 3.007e-14 Identity = 56/155 (36.13%), Postives = 78/155 (50.32%), Query Frame = 0
Query: 13 VTQVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGS-VIGISLV 165
TQ+L+LGSG+DTRAWRLPL + VTV EVDV K E L +++++ P ++ + L K R+ + A+ S + W + V E+P IL EGLLMYLP+ V E L + R APGS +G + V
Sbjct: 52 CTQLLLLGSGLDTRAWRLPLGEGVTVFEVDVACAHEFKRERLAEIEQEQ----PIRDGTTESHAKKLAHLRGAKCK-RVEVDADL----------SEARWGRLVADAGFDMERPAFILAEGLLMYLPDKDVTEGLFKQVRGLMAPGSWFMGCAFV 191
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|1129214928|gb|OLQ15580.1| (hypothetical protein AK812_SmicGene227 [Symbiodinium microadriaticum]) HSP 1 Score: 72.4034 bits (176), Expect = 1.311e-11 Identity = 58/173 (33.53%), Postives = 84/173 (48.55%), Query Frame = 0
Query: 9 RREKVTQVLILGSGMDTRAWRLPLPDVTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTAT---TPPSLPSSPSS---WVQAVRAGLP-APEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGM 174
R + Q+++LG+GMD+RA+RL P++ V EVD+P + KE +L Q P ++V +R V+P +F++T T L SPS W +A++ P P P V LLEGL+MYL E L + G + APGS I V VK +
Sbjct: 920 RSKPCRQLVLLGAGMDSRAFRLRFPELRVFEVDLPILFDEKEPLL--------QDEP------------------ISVFSRTVVPTDFSSTDDWTSKLLSFSPSQVGPWARALKNDAPFDPSVPTVWLLEGLMMYLTEREATATLRRVGALS-APGSSIFFDAVSAAYVKQNI 1065
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|1055154364|ref|WP_066901366.1| (SAM-dependent methyltransferase [Mycobacterium houstonense]) HSP 1 Score: 68.5514 bits (166), Expect = 1.636e-10 Identity = 57/173 (32.95%), Postives = 79/173 (45.66%), Query Frame = 0
Query: 10 REKVTQVLILGSGMDTRAWRLPLPDVTVI-EVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLV------DRESVKMGMR 175
R + Q +IL +G+D+RA+RLP PD TV+ EVD P VVR K + L L +P + L +++ R PA A PS P++W+ EGLL YLP DA +L Q + APGS +G+ V D ES++ MR
Sbjct: 102 RAGIRQAVILAAGLDSRAYRLPWPDGTVVYEVDQPEVVRFKTDTLAELG-----------------AAPTTDLRTVSMDLRFDWPAALIAAGFD--PSVPTAWIA-----------------EGLLGYLPGDAQDRLLDQVTEL-SAPGSRLGVEGVPATETNDEESIRARMR 237
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|1111728610|gb|OJJ15112.1| (hypothetical protein BI308_24570 [Roseofilum reptotaenium AO1-A]) HSP 1 Score: 67.3958 bits (163), Expect = 2.962e-10 Identity = 50/172 (29.07%), Postives = 78/172 (45.35%), Query Frame = 0
Query: 13 VTQVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGMRRRRGPGFF 183
+TQ++ILG+GMD RA+RLPLPD T+ E+D V+ AKE + ++ P+++ R I A+ T W + PE P V ++EGLLMYL E V ++L + AP S++G ++ + + R G+F
Sbjct: 81 LTQIVILGAGMDARAFRLPLPDKTTLYELDQAEVIEAKESYFQHIE---------------PQVN------------RQAIAADLT-----------QPWKALLLEQGYQPENPTVWIMEGLLMYLTETEVHQLLQTLSDLS-APESILGCDMLGKAGIDYAPYR----GYF 209
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|302446572|gb|EFL18388.1| (predicted protein [Streptomyces sp. C]) HSP 1 Score: 67.0106 bits (162), Expect = 4.929e-10 Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 0
Query: 6 RRGRREKVTQVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLVDRESVKMGMRR 176
R + + QV+ L +GMDTR +RLP PD VTV E+D PA++ AK E+L G+ P+P+ + R+ +P + T W + ++P++ ++EGLL +LPEDAV+ +++ R APGSV+ ++ + +++ + R
Sbjct: 68 RTVQEHGIRQVVFLAAGMDTRFYRLPWPDGVTVYELDRPALLEAKAEMLA------GE---PAPAG----------------RTRVTVPVDLT-----------QDWTGPLEDAGWRADQPVLWVVEGLLFFLPEDAVRGLISTLARHS-APGSVLLGDVISKAALQNPLSR 202
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|746791763|gb|KIF02681.1| (methyltransferase [Streptomyces sp. RSD-27]) HSP 1 Score: 66.6254 bits (161), Expect = 5.900e-10 Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 0
Query: 6 RRGRREKVTQVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVL-TQAGRMGEAPGSVIGISLVDRESVKMGMRR 176
R + + QV+ L +GMDTR +RLP PD V+V E+D PA++ AK E+L G+ P P+ + R+ +P + T W + P++P++ ++EGLL +LPE AV+ ++ T AGR APGSV+ ++ R +++ + R
Sbjct: 68 RTVQEHGIRQVVFLAAGMDTRFYRLPWPDGVSVYELDRPALLEAKAEMLA------GE---PQPAG----------------RTRVAVPVDLT-----------QDWTGPLEEAGWRPDEPVLWVVEGLLFFLPEAAVRNLISTLAGR--SAPGSVLLGDVISRSALENPLSR 202
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|558871952|ref|WP_023527650.1| (SAM-dependent methyltransferase [Streptomycetaceae bacterium MP113-05] >gi|558548969|gb|EST39297.1| hypothetical protein N566_02730 [Streptomycetaceae bacterium MP113-05]) HSP 1 Score: 65.855 bits (159), Expect = 1.154e-9 Identity = 51/152 (33.55%), Postives = 71/152 (46.71%), Query Frame = 0
Query: 15 QVLILGSGMDTRAWRLPLPD-VTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPPSSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGISLV 165
Q+++ SGMDTR +RLP V + E+D PAV+ AKE L+ P P + R+ +PA+ W + A P+ P V LLEGLL Y+PEDA +EVL++ R+ APGS + LV
Sbjct: 96 QIVMAASGMDTRPYRLPWAAPVRLFELDRPAVLDAKEAALRD--------APVHPHVT-----------------RVTVPADLLQ----------DDWTDDLCAAGYRPDVPSVWLLEGLLYYIPEDAAREVLSRVSRL-TAPGSEVAADLV 211
BLAST of EWM25275.1 vs. NCBI_GenBank
Match: gi|552848157|ref|XP_005852039.1| (hypothetical protein CHLNCDRAFT_133008 [Chlorella variabilis] >gi|307111703|gb|EFN59937.1| hypothetical protein CHLNCDRAFT_133008 [Chlorella variabilis]) HSP 1 Score: 66.2402 bits (160), Expect = 1.443e-9 Identity = 54/175 (30.86%), Postives = 83/175 (47.43%), Query Frame = 0
Query: 15 QVLILGSGMDTRAWRLPLP-DVTVIEVDVPAVVRAKEEVLKRLQEKEGQLPPPSPSSSPPEISPP---SSLTQLTVKARIVIPANFTATTPPSLPSSPSSWVQAVRAGLPAPEKPLVILLEGLLMYLPEDAVKEVLTQAGRMGEAPGSVIGIS----LVDRESVKMGMRRRRGPG 181
Q+++LG+GMD+R WR+ LP D+ E+D VV AK +L +L + + + P +SP S L + T + P + + S +W +A+ P KP V + EGLLMYL E V+ +L + + E IG+S ++DR R RG G
Sbjct: 151 QLVMLGTGMDSRPWRMKLPADLAWFELDQGDVVGAKRALLHQLAAEVPEPEERVEAQEEP-MSPKFVDSGLARHTSIDEVQFPLRCGSWAAVACDLSDPAWSEALVGAGFDPRKPTVWVAEGLLMYLEESKVQGMLRKVAELSEEGSVFIGLSVTLAVIDR-------LRARGKG 317 The following BLAST results are available for this feature:
BLAST of EWM25275.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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