EWM25277.1, cds5396 (CDS) Nannochloropsis gaditana

Overview
NameEWM25277.1
Unique Namecds5396
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:935811..936244 +

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Properties
Property NameValue
Protein idEWM25277.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101577g1.9731.mrna
GbkeyCDS
End range.
End range936244
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:935811..936244 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25277.1 vs. NCBI_GenBank
Match: gi|585107013|gb|EWM25277.1| (hypothetical protein Naga_101577g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 294.278 bits (752), Expect = 7.951e-101
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 
Query:    1 MGLPARMKNISDFVPPPPETQKAPLTRTLLVVGLSPASFKDEVLKHLWPKKYQPKLRLVWLNRDDPPPSLPPPWGWHETHRKPVESLLAPENVSEAGREEDIAQAWGDSIFVVMGAGCSVQDFRHLKVAWANAYPFDKELLQVR 144
            MGLPARMKNISDFVPPPPETQKAPLTRTLLVVGLSPASFKDEVLKHLWPKKYQPKLRLVWLNRDDPPPSLPPPWGWHETHRKPVESLLAPENVSEAGREEDIAQAWGDSIFVVMGAGCSVQDFRHLKVAWANAYPFDKELLQVR
Sbjct:    1 MGLPARMKNISDFVPPPPETQKAPLTRTLLVVGLSPASFKDEVLKHLWPKKYQPKLRLVWLNRDDPPPSLPPPWGWHETHRKPVESLLAPENVSEAGREEDIAQAWGDSIFVVMGAGCSVQDFRHLKVAWANAYPFDKELLQVR 144
The following BLAST results are available for this feature:
BLAST of EWM25277.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107013|gb|EWM25277.1|7.951e-101100.00hypothetical protein Naga_101577g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5409rna5409Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications