EWM25279.1, cds5394 (CDS) Nannochloropsis gaditana

Overview
NameEWM25279.1
Unique Namecds5394
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:934278..934281 +
Alignment locationCM002465.1:934367..934437 +
Alignment locationCM002465.1:934577..935047 +

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Properties
Property NameValue
Protein idEWM25279.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101577g3.9733.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:934278..934281 +
CM002465.1supercontigCM002465.1:934367..934437 +
CM002465.1supercontigCM002465.1:934577..935047 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25279.1 vs. NCBI_GenBank
Match: gi|585107015|gb|EWM25279.1| (hypothetical protein Naga_101577g3 [Nannochloropsis gaditana])

HSP 1 Score: 361.688 bits (927), Expect = 2.457e-126
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 MDHPKLRGGRAALRAACRLSDDHHQTQGAQRKGVATGPGHTVRRPGRGYAQAGCGSCLGPRREGGRWALRDEQVQSTRQRHVERGRKVLGRGKGEVGGGHGGVVYILGADREPVPVLVIMRKHRVADRDEKDTDSAQAALAVARVMAPPGGISSLSRTIPSPNKLGMKKAQGKYCNIRRNK 181
            MDHPKLRGGRAALRAACRLSDDHHQTQGAQRKGVATGPGHTVRRPGRGYAQAGCGSCLGPRREGGRWALRDEQVQSTRQRHVERGRKVLGRGKGEVGGGHGGVVYILGADREPVPVLVIMRKHRVADRDEKDTDSAQAALAVARVMAPPGGISSLSRTIPSPNKLGMKKAQGKYCNIRRNK
Sbjct:    1 MDHPKLRGGRAALRAACRLSDDHHQTQGAQRKGVATGPGHTVRRPGRGYAQAGCGSCLGPRREGGRWALRDEQVQSTRQRHVERGRKVLGRGKGEVGGGHGGVVYILGADREPVPVLVIMRKHRVADRDEKDTDSAQAALAVARVMAPPGGISSLSRTIPSPNKLGMKKAQGKYCNIRRNK 181
The following BLAST results are available for this feature:
BLAST of EWM25279.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107015|gb|EWM25279.1|2.457e-126100.00hypothetical protein Naga_101577g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5407rna5407Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications