EWM25281.1, cds5392 (CDS) Nannochloropsis gaditana

Overview
NameEWM25281.1
Unique Namecds5392
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:930020..930136 +
Alignment locationCM002465.1:930523..930669 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25281.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102358g1.10680.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:930020..930136 +
CM002465.1supercontigCM002465.1:930523..930669 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25281.1 vs. NCBI_GenBank
Match: gi|585107020|gb|EWM25281.1| (hypothetical protein Naga_102358g1 [Nannochloropsis gaditana])

HSP 1 Score: 169.088 bits (427), Expect = 3.904e-53
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 
Query:    1 MEVFHTLRSNSSPASPSSAPPSRPPSRFPSLLEEEGEREAIVDEEASFSSSPSSSSLPSFLLTPYDRLRYVTLMIRYCPQGLYDYLR 87
            MEVFHTLRSNSSPASPSSAPPSRPPSRFPSLLEEEGEREAIVDEEASFSSSPSSSSLPSFLLTPYDRLRYVTLMIRYCPQGLYDYLR
Sbjct:    1 MEVFHTLRSNSSPASPSSAPPSRPPSRFPSLLEEEGEREAIVDEEASFSSSPSSSSLPSFLLTPYDRLRYVTLMIRYCPQGLYDYLR 87
The following BLAST results are available for this feature:
BLAST of EWM25281.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107020|gb|EWM25281.1|3.904e-53100.00hypothetical protein Naga_102358g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5405rna5405Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications