EWM25285.1, cds5388 (CDS) Nannochloropsis gaditana

Overview
NameEWM25285.1
Unique Namecds5388
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:918636..918914 -

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Properties
Property NameValue
Protein idEWM25285.1
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_102685g1.2633.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:918636..918914 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|585107030|gb|EWM25285.1| (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 189.889 bits (481), Expect = 3.365e-61
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
Query:    1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLLESSRHQGRPTKGRERKGGRVDLGGGGG 92
            MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLLESSRHQGRPTKGRERKGGRVDLGGGGG
Sbjct:    1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLLESSRHQGRPTKGRERKGGRVDLGGGGG 92          
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|299117213|emb|CBN75175.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 77.411 bits (189), Expect = 1.372e-14
Identity = 32/69 (46.38%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLLESSR 69
            M+Q++ELFNINHF+VSQVNP A+L S++AL + +W+SP  + L  ++ F + Q R+W RN  + +   R
Sbjct:  442 MQQISELFNINHFIVSQVNPHASLLSTMALSKSVWSSPTYSFLVGIVGFLQTQVRNWFRNVIEFVSHRR 510          
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|397644655|gb|EJK76491.1| (hypothetical protein THAOC_01748 [Thalassiosira oceanica])

HSP 1 Score: 71.2478 bits (173), Expect = 1.565e-12
Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLL 65
            M+QL+E+FNINHF++SQ NP A +F S +L + +W+ PL+     V++F K Q R +  N F L 
Sbjct:  617 MQQLSEMFNINHFIISQANPHAVMFGSYSLNKSVWSHPLVTFFNGVLRFLKNQLRGYLSNAFDLF 681          
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|1210518354|dbj|GAX22768.1| (TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [Fistulifera solaris])

HSP 1 Score: 70.8626 bits (172), Expect = 2.634e-12
Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    2 EQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSW---------CRNFFQLLESSRHQGRPTKGRERKGGRVDL 87
            +QL+E+FN+NHF++SQ NP A +F+S      +W +PL+ VL  +++F + Q RSW          R    L E+SR  G     +E +G  +D+
Sbjct:  479 QQLSEMFNVNHFIISQANPHAVMFASYNHKAGVWTNPLVGVLESILRFLRDQVRSWLLHLVDCVGARRIAPLFETSRGIGASFFTQEYEGRSIDI 573          
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|1210521341|dbj|GAX19798.1| (TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [Fistulifera solaris])

HSP 1 Score: 70.4774 bits (171), Expect = 3.082e-12
Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    2 EQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSW---------CRNFFQLLESSRHQGRPTKGRERKGGRVDL 87
            +QL+E+FN+NHF++SQ NP A +F+S      +W +PL+ VL  +++F + Q RSW          R    L E+SR  G     +E +G  +D+
Sbjct:  496 QQLSEMFNVNHFIISQANPHAVMFASYNHKAGVWTNPLVGVLESILRFLRDQVRSWLLHLVDCVGARRIAPLFETSRGIGASFFTQEYEGRSIDI 590          
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|1072237782|gb|OEU22509.1| (patatin-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 69.3218 bits (168), Expect = 7.442e-12
Identity = 28/69 (40.58%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLLESSR 69
            M+QL+E+FN+NHF++SQ NP A +F+S +  + IW+SPL  ++  ++ F K Q RSW  +  +++ + R
Sbjct:  361 MQQLSEMFNVNHFIISQANPHAVMFASYSHLKSIWSSPLTGLVNSILIFLKDQCRSWLSHVVEMVGAGR 429          
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|219128642|ref|XP_002184517.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403967|gb|EEC43916.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 62.3882 bits (150), Expect = 2.068e-9
Identity = 28/97 (28.87%), Postives = 52/97 (53.61%), Query Frame = 0
Query:    1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSW---------CRNFFQLLESSRHQGRPTKGRERKGGRVDLG 88
            M+QL+E+FN+NHFL+SQ NP A +F++      +W++P+   +  ++ F + Q R+W          R+   + ++ R  G     +E +G   D+ 
Sbjct:  332 MQQLSEMFNVNHFLISQANPHAVMFANYQQKNSVWSNPVTGFVDSILTFLRDQVRTWLLHLVACVGARSITPMFQTQRGIGTTFLTQEYEGRSCDIS 428          
The following BLAST results are available for this feature:
BLAST of EWM25285.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585107030|gb|EWM25285.1|3.365e-61100.00conserved unknown protein [Nannochloropsis gaditan... [more]
gi|299117213|emb|CBN75175.1|1.372e-1446.38conserved unknown protein [Ectocarpus siliculosus][more]
gi|397644655|gb|EJK76491.1|1.565e-1244.62hypothetical protein THAOC_01748 [Thalassiosira oc... [more]
gi|1210518354|dbj|GAX22768.1|2.634e-1235.79TAG lipase / steryl ester hydrolase / phospholipas... [more]
gi|1210521341|dbj|GAX19798.1|3.082e-1235.79TAG lipase / steryl ester hydrolase / phospholipas... [more]
gi|1072237782|gb|OEU22509.1|7.442e-1240.58patatin-domain-containing protein, partial [Fragil... [more]
gi|219128642|ref|XP_002184517.1|2.068e-928.87predicted protein, partial [Phaeodactylum tricornu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5401rna5401Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications