EWM25285.1, cds5388 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|585107030|gb|EWM25285.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 189.889 bits (481), Expect = 3.365e-61 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 Query: 1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLLESSRHQGRPTKGRERKGGRVDLGGGGG 92 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLLESSRHQGRPTKGRERKGGRVDLGGGGG Sbjct: 1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLLESSRHQGRPTKGRERKGGRVDLGGGGG 92
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|299117213|emb|CBN75175.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 77.411 bits (189), Expect = 1.372e-14 Identity = 32/69 (46.38%), Postives = 49/69 (71.01%), Query Frame = 0 Query: 1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLLESSR 69 M+Q++ELFNINHF+VSQVNP A+L S++AL + +W+SP + L ++ F + Q R+W RN + + R Sbjct: 442 MQQISELFNINHFIVSQVNPHASLLSTMALSKSVWSSPTYSFLVGIVGFLQTQVRNWFRNVIEFVSHRR 510
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|397644655|gb|EJK76491.1| (hypothetical protein THAOC_01748 [Thalassiosira oceanica]) HSP 1 Score: 71.2478 bits (173), Expect = 1.565e-12 Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 0 Query: 1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLL 65 M+QL+E+FNINHF++SQ NP A +F S +L + +W+ PL+ V++F K Q R + N F L Sbjct: 617 MQQLSEMFNINHFIISQANPHAVMFGSYSLNKSVWSHPLVTFFNGVLRFLKNQLRGYLSNAFDLF 681
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|1210518354|dbj|GAX22768.1| (TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [Fistulifera solaris]) HSP 1 Score: 70.8626 bits (172), Expect = 2.634e-12 Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 0 Query: 2 EQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSW---------CRNFFQLLESSRHQGRPTKGRERKGGRVDL 87 +QL+E+FN+NHF++SQ NP A +F+S +W +PL+ VL +++F + Q RSW R L E+SR G +E +G +D+ Sbjct: 479 QQLSEMFNVNHFIISQANPHAVMFASYNHKAGVWTNPLVGVLESILRFLRDQVRSWLLHLVDCVGARRIAPLFETSRGIGASFFTQEYEGRSIDI 573
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|1210521341|dbj|GAX19798.1| (TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [Fistulifera solaris]) HSP 1 Score: 70.4774 bits (171), Expect = 3.082e-12 Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 0 Query: 2 EQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSW---------CRNFFQLLESSRHQGRPTKGRERKGGRVDL 87 +QL+E+FN+NHF++SQ NP A +F+S +W +PL+ VL +++F + Q RSW R L E+SR G +E +G +D+ Sbjct: 496 QQLSEMFNVNHFIISQANPHAVMFASYNHKAGVWTNPLVGVLESILRFLRDQVRSWLLHLVDCVGARRIAPLFETSRGIGASFFTQEYEGRSIDI 590
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|1072237782|gb|OEU22509.1| (patatin-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 69.3218 bits (168), Expect = 7.442e-12 Identity = 28/69 (40.58%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSWCRNFFQLLESSR 69 M+QL+E+FN+NHF++SQ NP A +F+S + + IW+SPL ++ ++ F K Q RSW + +++ + R Sbjct: 361 MQQLSEMFNVNHFIISQANPHAVMFASYSHLKSIWSSPLTGLVNSILIFLKDQCRSWLSHVVEMVGAGR 429
BLAST of EWM25285.1 vs. NCBI_GenBank
Match: gi|219128642|ref|XP_002184517.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403967|gb|EEC43916.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 62.3882 bits (150), Expect = 2.068e-9 Identity = 28/97 (28.87%), Postives = 52/97 (53.61%), Query Frame = 0 Query: 1 MEQLAELFNINHFLVSQVNPQATLFSSVALPQRIWASPLLAVLAHVMQFCKRQFRSW---------CRNFFQLLESSRHQGRPTKGRERKGGRVDLG 88 M+QL+E+FN+NHFL+SQ NP A +F++ +W++P+ + ++ F + Q R+W R+ + ++ R G +E +G D+ Sbjct: 332 MQQLSEMFNVNHFLISQANPHAVMFANYQQKNSVWSNPVTGFVDSILTFLRDQVRTWLLHLVACVGARSITPMFQTQRGIGTTFLTQEYEGRSCDIS 428 The following BLAST results are available for this feature:
BLAST of EWM25285.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|