EWM25286.1, cds5387 (CDS) Nannochloropsis gaditana

Overview
NameEWM25286.1
Unique Namecds5387
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:917758..917867 +
Alignment locationCM002465.1:918211..918316 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25286.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102360g1.3396.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:917758..917867 +
CM002465.1supercontigCM002465.1:918211..918316 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25286.1 vs. NCBI_GenBank
Match: gi|585107032|gb|EWM25286.1| (hypothetical protein Naga_102360g1 [Nannochloropsis gaditana])

HSP 1 Score: 142.124 bits (357), Expect = 6.585e-43
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:    1 MAMRGKNQEEACTPSFATTKERGGKKNKRRESIRSNSPPPNAFPSMTWSSSPSSWLSPSSSWQYQRACRWR 71
            MAMRGKNQEEACTPSFATTKERGGKKNKRRESIRSNSPPPNAFPSMTWSSSPSSWLSPSSSWQYQRACRWR
Sbjct:    1 MAMRGKNQEEACTPSFATTKERGGKKNKRRESIRSNSPPPNAFPSMTWSSSPSSWLSPSSSWQYQRACRWR 71
The following BLAST results are available for this feature:
BLAST of EWM25286.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107032|gb|EWM25286.1|6.585e-43100.00hypothetical protein Naga_102360g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5400rna5400Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications