EWM25287.1, cds5385 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25287.1 vs. NCBI_GenBank
Match: gi|585107034|gb|EWM25287.1| (hypothetical protein Naga_100403g4 [Nannochloropsis gaditana]) HSP 1 Score: 371.703 bits (953), Expect = 5.470e-130 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
Query: 1 MASTAVKTPAANLPPDVIATALLSLDKTANLARALSSPPTQMPSTISDTVSSTSAGSAESSPVASTSSPALYVTARVGARGRVLASVKIPVPPSSPPAFPLEVHLKEGDIYADTPQARHDLAQAIRSSDLVLSARLDSDGRASTRDPRDLVGQGVVYKFQSVDSAQWSRADISLTGRGAFGELVTGGKVR 190
MASTAVKTPAANLPPDVIATALLSLDKTANLARALSSPPTQMPSTISDTVSSTSAGSAESSPVASTSSPALYVTARVGARGRVLASVKIPVPPSSPPAFPLEVHLKEGDIYADTPQARHDLAQAIRSSDLVLSARLDSDGRASTRDPRDLVGQGVVYKFQSVDSAQWSRADISLTGRGAFGELVTGGKVR
Sbjct: 1 MASTAVKTPAANLPPDVIATALLSLDKTANLARALSSPPTQMPSTISDTVSSTSAGSAESSPVASTSSPALYVTARVGARGRVLASVKIPVPPSSPPAFPLEVHLKEGDIYADTPQARHDLAQAIRSSDLVLSARLDSDGRASTRDPRDLVGQGVVYKFQSVDSAQWSRADISLTGRGAFGELVTGGKVR 190
BLAST of EWM25287.1 vs. NCBI_GenBank
Match: gi|551586267|ref|XP_005778225.1| (hypothetical protein EMIHUDRAFT_205940 [Emiliania huxleyi CCMP1516] >gi|485630580|gb|EOD25796.1| hypothetical protein EMIHUDRAFT_205940 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 59.6918 bits (143), Expect = 9.477e-8 Identity = 44/106 (41.51%), Postives = 56/106 (52.83%), Query Frame = 0
Query: 67 SSPALYVTAR-VGARGRVLASVKIPVPPS----SPPAFPLEVHLKEGDIYADTPQARHDLAQAIRSSDLVLSARLDSDGRASTRDPRDLVGQGVVYKFQSVDSAQW 167
S ALYVTAR + G + A K P S +P FP E L D+ T + R A + DLV+SARLD DG A+TR P DLVG+G + K S + +W
Sbjct: 64 SGAALYVTARPASSEGALQAGAKTPPIASARFATPLLFPFEFVLTTDDL---TAEYRAADAASFNRLDLVISARLDGDGVAATRGPDDLVGRGTLSKRGSGRAEEW 166 The following BLAST results are available for this feature:
BLAST of EWM25287.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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