EWM25312.1, cds5367 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25312.1 vs. NCBI_GenBank
Match: gi|585107067|gb|EWM25312.1| (ap2 ethylene-responsive transcription factor ant-like protein [Nannochloropsis gaditana]) HSP 1 Score: 685.256 bits (1767), Expect = 0.000e+0 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
Query: 1 MGVNWNGKNNRWIAEVRHKKQRLLHRAFSDEEEAAHAIDRVLRQHFGETILTNFHHPSGVFLDPKHAFVTKVSTGSSSSCSDNTFTSTATWAVTYVEGLRLYKAVIKLRGRPHLIGLFSSRDQAIAVIKKKTQPREKGGMSKSPKQSRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDKDSQNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDLQGNRTQVRMKLNNSAAAKVKYTVRENSDKEDENS 326
MGVNWNGKNNRWIAEVRHKKQRLLHRAFSDEEEAAHAIDRVLRQHFGETILTNFHHPSGVFLDPKHAFVTKVSTGSSSSCSDNTFTSTATWAVTYVEGLRLYKAVIKLRGRPHLIGLFSSRDQAIAVIKKKTQPREKGGMSKSPKQSRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDKDSQNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDLQGNRTQVRMKLNNSAAAKVKYTVRENSDKEDENS
Sbjct: 1 MGVNWNGKNNRWIAEVRHKKQRLLHRAFSDEEEAAHAIDRVLRQHFGETILTNFHHPSGVFLDPKHAFVTKVSTGSSSSCSDNTFTSTATWAVTYVEGLRLYKAVIKLRGRPHLIGLFSSRDQAIAVIKKKTQPREKGGMSKSPKQSRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDKDSQNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDLQGNRTQVRMKLNNSAAAKVKYTVRENSDKEDENS 326
BLAST of EWM25312.1 vs. NCBI_GenBank
Match: gi|553181513|ref|XP_005853579.1| (aintegumenta-like protein [Nannochloropsis gaditana CCMP526] >gi|422295484|gb|EKU22783.1| aintegumenta-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 394.815 bits (1013), Expect = 7.400e-137 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
Query: 140 MSKSPKQSRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDKDSQNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDLQGNRTQVRMKLNNSAAAKVKYTVRENSDKEDENS 326
MSKSPKQSRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDKDSQNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDLQGNRTQVRMKLNNSAAAKVKYTVRENSDKEDENS
Sbjct: 1 MSKSPKQSRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDKDSQNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDLQGNRTQVRMKLNNSAAAKVKYTVRENSDKEDENS 187
BLAST of EWM25312.1 vs. NCBI_GenBank
Match: gi|760438117|ref|XP_011396127.1| (AP2-like ethylene-responsive transcription factor AIL5 [Auxenochlorella protothecoides] >gi|675350817|gb|KFM23257.1| AP2-like ethylene-responsive transcription factor AIL5 [Auxenochlorella protothecoides]) HSP 1 Score: 72.0182 bits (175), Expect = 1.960e-10 Identity = 54/149 (36.24%), Postives = 73/149 (48.99%), Query Frame = 0
Query: 147 SRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMN--GNFLDPKNRSTRIDASAGVDKDSQNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDLQ 293
SRF GVSW+ + KW A+++ G+ V + E EE+AA YD R G A NF + G F P + + A+ G FRGVSWS W A++ R LG F D +AA +YD+A + +G A NF LQ
Sbjct: 117 SRFRGVSWNSNCAKWRAQVWK-GSEVHHLGYFEG-EEDAARAYDEAVLRIRGPDAPTNFPRSQYGAFPVPGDHDFQGGAAIGAS------GFRGVSWSDAHQAWLAELWNGSRFQLLGSFRDEASAARRYDVACLELNGADALTNFPLQ 257 HSP 2 Score: 70.4774 bits (171), Expect = 6.198e-10 Identity = 54/174 (31.03%), Postives = 75/174 (43.10%), Query Frame = 0
Query: 118 FSSRDQAIAVIKKKTQPREKGGMSKSPKQSRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDKDSQNMD-FRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNF 290
FS R + ++ PR+ G+ P S++ GV W + KW AR+Y G + + EE AA YD YA R HG+ +NF + + G + FRGVSW+ KW AQ+ +LGYF + AA YD A + G A NF
Sbjct: 12 FSPRTTPSSAPARR--PRQGLGVRGGP--SKYRGVVWHKSNSKWEARIYEGGKQKFLGYYT--SEEAAAHAYDTYAVRLHGNLQKLNFP------ELYASGAEVYHDPGTPPPVKGTSRFRGVSWNSNCAKWRAQVWKGSEVHHLGYFEGEEDAARAYDEAVLRIRGPDAPTNF 173
BLAST of EWM25312.1 vs. NCBI_GenBank
Match: gi|1085335299|gb|OGV08692.1| (hypothetical protein A2299_16350 [Ignavibacteria bacterium RIFOXYB2_FULL_37_11] >gi|1085340621|gb|OGV13479.1| hypothetical protein A2237_17045 [Ignavibacteria bacterium RIFOXYA2_FULL_38_8] >gi|1085341951|gb|OGV14770.1| hypothetical protein A2440_09730 [Ignavibacteria bacterium RIFOXYC2_FULL_38_25] >gi|1085349947|gb|OGV22305.1| hypothetical protein A2499_04980 [Ignavibacteria bacterium RIFOXYC12_FULL_38_8] >gi|1085410411|gb|OGV79263.1| hypothetical protein A2X65_02100 [Melioribacter sp. GWF2_38_21]) HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-9 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 0
Query: 145 KQSRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDKDSQNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFD 291
K S++ GVS+ KKW A +Y+DG + F ++E +AA YD Y+ D +NF ++ P N RI + + + + ++ + GV +S +KW A+I + ++G+F+ AA YD AR YHG A NF+
Sbjct: 23 KTSKYAGVSYRKARKKWCANIYYDGKQQWVGYF--EKEIDAAKAYDKVMAYYNADVHKMNFAIDLA-EAPNNIRRRIRVAGKIKRKASSI-YLGVHYSDRLHKWKAEISHNKQCIHIGFFNSETEAASAYDKVARYYHGENAVTNFE 165 HSP 2 Score: 62.3882 bits (150), Expect = 2.070e-7 Identity = 52/155 (33.55%), Postives = 74/155 (47.74%), Query Frame = 0
Query: 138 GGMSKSPKQSRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDKDSQNMDFRGVSWSKETNKWYAQIRV-AGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFD 291
G K S +LGV + KW A + H+ + F + E EAA YD AR YHG+ A NF+ G+ P + +++ +RGV + N W AQI+V R ++ Y ++V+AA YD AAR YHG A+ NF
Sbjct: 99 AGKIKRKASSIYLGVHYSDRLHKWKAEISHNKQCIHIGFF--NSETEAASAYDKVARYYHGENAVTNFE--GHHSAP-------ASFIKLERHPVTSHYRGVC--RHKNIWLAQIKVHRKRVWSREYKTEVEAAE-GYDRAARYYHGEKAQTNFS 239 HSP 3 Score: 61.2326 bits (147), Expect = 4.798e-7 Identity = 70/281 (24.91%), Postives = 114/281 (40.57%), Query Frame = 0
Query: 2 GVNWNGKNNRWIAEVRHKKQRLLHRAFSDEEEAAHAIDRVLRQHFGETILTNFHHPSGVFLDPKHAFVTKVSTGSSSSCSDNTFTSTATWAVTYVEGLRLYKAVIKLRGRPHLIGLFSSRDQAIAVIKK-----------------KTQPREKGGMSKSPKQSRFLGVSWDCHHKK-WTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDKDSQNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYF 264
GV++ +W A + + ++ F E +AA A D+V+ + + NF +D A + + S+ V Y + L +KA I + IG F+S +A + K + P + + P S + GV C HK W A++ RV S+ +K E EAA YD AR YHG+ A NF + R + +++ ++GVS+ K +W AQI++ G+T LGY+
Sbjct: 29 GVSYRKARKKWCANIYYDGKQQWVGYFEKEIDAAKAYDKVMAYYNADVHKMNF------AIDLAEA-PNNIRRRIRVAGKIKRKASSIYLGVHYSDRLHKWKAEISHNKQCIHIGFFNSETEAASAYDKVARYYHGENAVTNFEGHHSAPASFIKLERHPVTSHYRGV---CRHKNIWLAQIKVHRKRVWSREYK--TEVEAAEGYDRAARYYHGEKAQTNFSGTAILSHVEIRKEKCPSTS---------SYKGVSYCKRDKRWIAQIKLNGKTKYLGYY 288
BLAST of EWM25312.1 vs. NCBI_GenBank
Match: gi|255081480|ref|XP_002507962.1| (AP2-like protein [Micromonas commoda] >gi|226523238|gb|ACO69220.1| AP2-like protein [Micromonas commoda]) HSP 1 Score: 68.9366 bits (167), Expect = 2.766e-9 Identity = 56/180 (31.11%), Postives = 88/180 (48.89%), Query Frame = 0
Query: 127 VIKKKTQPREKGGMSKSPKQ-----SRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMN--GNFLDPKNRSTRIDASAGVDKDSQNM-----DFRGVSWSKETNKWYAQI-RVAGRTFN-LGYFSDVKAAALQYDMAARKYHGTYARCNFDL 292
V K+K + G +PK+ S++ GV+ C +W A ++ DG +V F D E++AAL YD+ A + G+ A NFDMN L N + + + + S+ FRGV+ + +W A+I ++ GR + LG + + AA+ YD A + G A NFDL
Sbjct: 203 VAKRKRDGISRQGFGDTPKRGTRTTSKYRGVTHHCRTGRWEAHIWEDGKQVYLGGF--DSEQQAALAYDVAAIKCRGEEASTNFDMNDYAQELAALNSVGKEELVLSLRRQSKGFVKGSSKFRGVT-RHQKGRWEARIGQLVGRKYRYLGLYDQAEEAAVAYDTEAVRQKGFDAVTNFDL 379
BLAST of EWM25312.1 vs. NCBI_GenBank
Match: gi|825995196|ref|WP_047156244.1| (hypothetical protein [Trichodesmium erythraeum]) HSP 1 Score: 61.6178 bits (148), Expect = 1.709e-8 Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 0
Query: 205 FDMNGNFLDPKNRSTR-IDASAGVDKDS---QNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDL 292
+ +N N LD + + R + SA + + + +RGV W K+ KW A+I+V + LG F K AA+ YD AARKY+G+ AR NF +
Sbjct: 10 YHINHNKLDNQRENLRLVKGSARMHRRPSVKHSSKYRGVYWCKDKRKWIAEIKVYKKQIRLGRFEVEKDAAIAYDEAARKYYGSLARTNFTI 101
BLAST of EWM25312.1 vs. NCBI_GenBank
Match: gi|255071407|ref|XP_002499377.1| (predicted protein [Micromonas commoda] >gi|226514640|gb|ACO60636.1| predicted protein [Micromonas commoda]) HSP 1 Score: 65.4698 bits (158), Expect = 2.365e-8 Identity = 46/143 (32.17%), Postives = 67/143 (46.85%), Query Frame = 0
Query: 144 PKQSRFLGVSWDCHHKKWTARLYHDGTRVLSQTFKEDQEEEAALVYDMYARRYHGDGAFVNFDMNGNFLDPKNRSTRIDASAGVDK--------DSQNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAA 278
PK S+F GV+ KKW A++ G + D EEEAA +D A G A N+ + ++ ++ S V +Q +RGVS K+T KW+ QI V G+ +LG+F+ + AA YD AA
Sbjct: 3 PKSSKFRGVTLFRPTKKWRAQISAGGK--TTSLGDHDTEEEAARAFDRAAINKAGPVAATNYPIT-DYAKEMEALQKVSVSELVATLRAKARRHGTQTSQYRGVSLLKQTGKWHGQINVGGKQLHLGFFATEELAARAYDRAA 142
BLAST of EWM25312.1 vs. NCBI_GenBank
Match: gi|1098844409|ref|XP_018828978.1| (PREDICTED: AP2-like ethylene-responsive transcription factor BBM isoform X3 [Juglans regia]) HSP 1 Score: 65.855 bits (159), Expect = 3.020e-8 Identity = 68/203 (33.50%), Postives = 101/203 (49.75%), Query Frame = 0
Query: 123 QAIAVIKKKTQPREKGGMSKSPKQSRFLGVSWDCHHKKWTAR----LYHDGTRVLSQTFKE-----DQEEEAALVYDMYARRYHGDGAFVNFDMNGNF---LDPKNRSTRIDASAGVDKDSQNMD-----FRGVSWSKETNKWYAQI-RVAG-RTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDLQGNRTQVRMKLNNS 306
Q+ + I+ T PR K + + S + GV+ H+ WT R L+ + R QT K D+EE+AA YD+ A +Y G NF M+ N+ L+ TR++ A + + S +RGV+ + +W A+I RVAG + LG FS + AA YD+AA K+ G A NFD+ NR V+ L +S
Sbjct: 281 QSSSAIEAATVPR-KSIDTFGQRTSIYRGVTRFSRHR-WTGRYEAHLWDNSCRREGQTRKGRQGGYDKEEKAARAYDLAALKYWGTTTTTNFPMS-NYEKELEEMKHMTRLEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDM--NRYDVKSILESS 478
BLAST of EWM25312.1 vs. NCBI_GenBank
Match: gi|499933104|ref|WP_011613838.1| (pathogenesis-related transcriptional factor and ERF [Trichodesmium erythraeum] >gi|110168976|gb|ABG53516.1| Pathogenesis-related transcriptional factor and ERF [Trichodesmium erythraeum IMS101]) HSP 1 Score: 62.3882 bits (150), Expect = 3.235e-8 Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 0
Query: 205 FDMNGNFLDPKNRSTR-IDASAGVDKDS---QNMDFRGVSWSKETNKWYAQIRVAGRTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDL 292
+ +N N LD + + R + SA + + + +RGV W K+ KW A+I+V + LG F K AA+ YD AARKY+G+ AR NF +
Sbjct: 64 YHINHNKLDNQRENLRLVKGSARMHRRPSVKHSSKYRGVYWCKDKRKWIAEIKVYKKQIRLGRFEVEKDAAIAYDEAARKYYGSLARTNFTI 155
BLAST of EWM25312.1 vs. NCBI_GenBank
Match: gi|302791093|ref|XP_002977313.1| (hypothetical protein SELMODRAFT_107288, partial [Selaginella moellendorffii] >gi|300154683|gb|EFJ21317.1| hypothetical protein SELMODRAFT_107288, partial [Selaginella moellendorffii]) HSP 1 Score: 65.0846 bits (157), Expect = 3.418e-8 Identity = 73/258 (28.29%), Postives = 112/258 (43.41%), Query Frame = 0
Query: 66 HAFVTKVSTGSSSSCSDNTFTSTATWAVTYVEGLRLYKAVIKLRGRPHLIGLFSSRDQAIAVIKKKTQPREK----GGMSKSPKQSR---------FLGVSWDCHHKKWTAR----LYHDGTRVLSQTFKE-----DQEEEAALVYDMYARRYHGDGAFVNFDMNG--NFLDPKNRSTRIDASAGVDKDSQNMD-----FRGVSWSKETNKWYAQI-RVAG-RTFNLGYFSDVKAAALQYDMAARKYHGTYARCNFDL 292
H TK + + + + STAT + + A+ L+ L S Q+ +QP +K GG SP++S + GV+ +WT R L+ + R QT K D+EE+AA YD+ A +Y G +NF ++ L+ TR + A + + S +RGV+ + +W A+I RVAG + LG FS + AA YD+AA K+ G A NFD+
Sbjct: 65 HQLATKATIAPAIAANPGAAKSTATGGASGE-----FSALANLQ---SLTLSMSPGSQSSTAAAAPSQPPKKRPKAGGKEPSPRKSIDTFGQRTSIYRGVT---SRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTTINFPLSDYEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGINAVTNFDI 311 The following BLAST results are available for this feature:
BLAST of EWM25312.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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