EWM25303.1, cds5363 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25303.1 vs. NCBI_GenBank
Match: gi|585107058|gb|EWM25303.1| (transcription factor iiib 90 kda subunit [Nannochloropsis gaditana]) HSP 1 Score: 1408.66 bits (3645), Expect = 0.000e+0 Identity = 684/684 (100.00%), Postives = 684/684 (100.00%), Query Frame = 0
Query: 1 MQHMHRKLPSVCLLGPDDNHIHPVGEARFLPMEQILRCPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMKEAQALQEGKKDFEERNGPGAKEQERLATLKDSSTPSGPGTVSAAAAAVAAVAAAAATIGSKRGGLCRGRGRGASVATIRSSKRVRRSEPLEEIAQEEDPLPQEEDEDEEGGVGDFDGGLHKELMDQLLDEEEEKAKKIAVAEAAAAGCQAPGRQQHGGKKGGEIALSESGVEALIGDGVLQDEAKETDDTAQYIRSNAEVEKLSKVWHEVHKGYLEKQARKKAEEEAVKKRAEEDFNYRPPGQSNQRRKAAAAAAAASVVSGAQQGAGEGGAITPAGPERSPAEIAVSNHLAKKRISKKINYEAVKMLGNDDDLDAHPPELEAMMSQHQA 684
MQHMHRKLPSVCLLGPDDNHIHPVGEARFLPMEQILRCPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMKEAQALQEGKKDFEERNGPGAKEQERLATLKDSSTPSGPGTVSAAAAAVAAVAAAAATIGSKRGGLCRGRGRGASVATIRSSKRVRRSEPLEEIAQEEDPLPQEEDEDEEGGVGDFDGGLHKELMDQLLDEEEEKAKKIAVAEAAAAGCQAPGRQQHGGKKGGEIALSESGVEALIGDGVLQDEAKETDDTAQYIRSNAEVEKLSKVWHEVHKGYLEKQARKKAEEEAVKKRAEEDFNYRPPGQSNQRRKAAAAAAAASVVSGAQQGAGEGGAITPAGPERSPAEIAVSNHLAKKRISKKINYEAVKMLGNDDDLDAHPPELEAMMSQHQA
Sbjct: 1 MQHMHRKLPSVCLLGPDDNHIHPVGEARFLPMEQILRCPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMKEAQALQEGKKDFEERNGPGAKEQERLATLKDSSTPSGPGTVSAAAAAVAAVAAAAATIGSKRGGLCRGRGRGASVATIRSSKRVRRSEPLEEIAQEEDPLPQEEDEDEEGGVGDFDGGLHKELMDQLLDEEEEKAKKIAVAEAAAAGCQAPGRQQHGGKKGGEIALSESGVEALIGDGVLQDEAKETDDTAQYIRSNAEVEKLSKVWHEVHKGYLEKQARKKAEEEAVKKRAEEDFNYRPPGQSNQRRKAAAAAAAASVVSGAQQGAGEGGAITPAGPERSPAEIAVSNHLAKKRISKKINYEAVKMLGNDDDLDAHPPELEAMMSQHQA 684
BLAST of EWM25303.1 vs. NCBI_GenBank
Match: gi|219129783|ref|XP_002185060.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403555|gb|EEC43507.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 313.923 bits (803), Expect = 1.713e-94 Identity = 178/372 (47.85%), Postives = 234/372 (62.90%), Query Frame = 0
Query: 17 DDNHIHPVGEARFLPM---EQILRCPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGR--------RRFYTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMKE--AQALQEGKKD-FEERNGPGA 374
D H H + +P + CPN C T +E + GA++C C +VEENAIVS+VEF E AGGAS++VGQFV +KAY+ G R ++RDSR+TTL NGRR IQ+V S+LRL FVD A RLF AVERNFVQGR+T VVA CLY+ CR++ S HMLIDFSDA+Q+NVY LG FLKF++L GL L +IDP++YI+RFAA L+L +++ VS ALRLVA M+RDWI AGRRP+GIC AAL +++ H R ++DV RI+RV T+ RV EFE TP S ++ E+ ++ + EADPP F R K +E A+A+++G + E +GP A
Sbjct: 45 DAAHNHASADTNSIPKPASTMSIFCPN--CGSTSIEQHDASGASVCTECGVVVEENAIVSAVEFVEG-AGGASSMVGQFVSATSSKAYTGGPGGGGPGGGAGGRYGFSRDSRETTLANGRRRIQEVASRLRLGTHFVDAAHRLFTIAVERNFVQGRRTTHVVAACLYIACRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLKLEIIDPALYIYRFAAHLDL--DEKANAVSLTALRLVARMKRDWIVAGRRPAGICAAALLIASRAHGFSRHHQDVTRILRVCGWTVTNRVKEFEHTP-SAALTLEQFQKVDLD---------------VEADPPVFRRN-KFREARAKAIRQGNVELLESESGPLA 394
BLAST of EWM25303.1 vs. NCBI_GenBank
Match: gi|1210528291|dbj|GAX12980.1| (transcription factor IIIB 90 kDa subunit [Fistulifera solaris]) HSP 1 Score: 309.686 bits (792), Expect = 8.992e-93 Identity = 172/329 (52.28%), Postives = 229/329 (69.60%), Query Frame = 0
Query: 36 LRCPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMKEA--QALQEG 362
L CPN C G +E E GA+IC+ C +VEENAIVS+VEF E AGG+S +VGQFV +KAY+ A GRR +++DSR+TTL NGRR IQ+V S+LRL FVD A RLF AVE+NFVQGR+T+ VVA CLY+ CR++ S HMLIDFSDA+Q+NVY LG FLKF++L GL L +IDP++YI+RFAA L+L +++ VS ALRLVA M+RDWI AGRRP+GIC AAL ++A H + + DV RI++V T+ RV EFE+TP S ++ ++ + + +L R E DPP++TR K++EA +A+Q+G
Sbjct: 34 LMCPN--CGGKAIEQHEASGASICIECGIVVEENAIVSAVEFVEG-AGGSSNMVGQFVSASSSKAYTGAAVGRRYAFSKDSRETTLANGRRRIQEVASRLRLGSHFVDAAHRLFTIAVEKNFVQGRRTIHVVAACLYIACRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLQLEIIDPALYIYRFAAHLDL--DEKANAVSMTALRLVARMKRDWIVAGRRPAGICAAALLIAARVHGFSKHHHDVTRILKVCGMTVTSRVREFEKTP-SARLTLDQFSTV------ELQR---------EVDPPAYTRN-KIQEARLKAIQDG 340
BLAST of EWM25303.1 vs. NCBI_GenBank
Match: gi|1210530356|dbj|GAX10940.1| (transcription factor IIIB 90 kDa subunit [Fistulifera solaris]) HSP 1 Score: 309.686 bits (792), Expect = 9.184e-93 Identity = 172/329 (52.28%), Postives = 229/329 (69.60%), Query Frame = 0
Query: 36 LRCPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMKEA--QALQEG 362
L CPN C G +E E GA+IC+ C +VEENAIVS+VEF E AGG+S +VGQFV +KAY+ A GRR +++DSR+TTL NGRR IQ+V S+LRL FVD A RLF AVE+NFVQGR+T+ VVA CLY+ CR++ S HMLIDFSDA+Q+NVY LG FLKF++L GL L +IDP++YI+RFAA L+L +++ VS ALRLVA M+RDWI AGRRP+GIC AAL ++A H + + DV RI++V T+ RV EFE+TP S ++ ++ + + +L R E DPP++TR K++EA +A+Q+G
Sbjct: 34 LTCPN--CGGKAIEQHEASGASICIECGIVVEENAIVSAVEFVEG-AGGSSNMVGQFVSASSSKAYTGAAVGRRYSFSKDSRETTLANGRRRIQEVASRLRLGSHFVDAAHRLFTIAVEKNFVQGRRTIHVVAACLYIACRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLQLEIIDPALYIYRFAAHLDL--DEKANAVSMTALRLVARMKRDWIVAGRRPAGICAAALLIAARVHGFSKHHHDVTRILKVCGMTVTSRVREFEKTP-SARLTLDQFSTV------ELQR---------EVDPPAYTRN-KIQEARLKAIQDG 340
BLAST of EWM25303.1 vs. NCBI_GenBank
Match: gi|1072237985|gb|OEU22712.1| (cyclin-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 288.886 bits (738), Expect = 1.440e-86 Identity = 167/340 (49.12%), Postives = 221/340 (65.00%), Query Frame = 0
Query: 38 CPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRF-YTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMK-EAQALQEGKKDF---EERNGP 372
CPN C +E GA++C C I+EENAIVS+VEF E GGAS++VGQFV KAY+ GR + ++RDSR+TTL NGRR IQ+V S+LRL +VD A RLF AVE+NFVQGR+T+ VVA CLY+ CR++ S HMLIDFSDA+Q+NVY LG FLKF++L GL LA++DP++YI+RFAA L+L + V+ ALRLV M+RDWI GRRP+GIC AAL ++A H R +DV RI+RV T+ RV EFE+TP S ++ ++ + + + EADPP+FTR ++ A+A+QE + EER P
Sbjct: 10 CPN--CGSKHIELQGASGASVCTECGVILEENAIVSNVEFVEGQ-GGASSMVGQFVSATSRKAYTGGGRAGGNYGFSRDSRETTLANGRRKIQEVASRLRLGGHYVDSAHRLFTIAVEKNFVQGRRTIHVVAACLYISCRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLKLAILDPALYIYRFAAHLDLND--QANLVALTALRLVGRMKRDWIVCGRRPAGICAAALLIAARAHGFSRHPQDVTRILRVCGMTVTTRVREFEQTP-SASLTLQQFGRVELEN---------------EADPPAFTRNRILEARARAIQENNVELLTSEERLPP 328
BLAST of EWM25303.1 vs. NCBI_GenBank
Match: gi|922862475|gb|KOO30075.1| (brf1 subunit of RNA polymerase iii transcription initiation factor iiib [Chrysochromulina sp. CCMP291]) HSP 1 Score: 283.493 bits (724), Expect = 1.861e-85 Identity = 161/362 (44.48%), Postives = 219/362 (60.50%), Query Frame = 0
Query: 38 CPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMKEAQAL---------QEGKKDFEERNGPGAKEQERLATLKDSSTPS 390
CPN C TD+E G +C+ C T++EENAIV+ V F ++ AGG S VVGQ+V T S+G G ++SR+ NNG+R I Q+ + LRL + + A RLF AV+ NF+QGR+T V+A CLY VCR++ +PH+LID+SD +Q NVY+LG FLKF +L L L +IDPS+YIHRFA+RLE G + VS ALRLV M+RDWIQ GRRPSGICGAAL ++A H RT ++V R+VR+ T++KR+ EF TP+ + +R ++ +D E P ADPPS+TR + + AQ L Q ++ E R A+ + RLA L + T S
Sbjct: 6 CPN--CGSTDIETDAQRGDAVCIQCGTVLEENAIVNEVTFAQD-AGGGSQVVGQYVAA--TPGVGSSGLG-----FKESRELAFNNGQRHISQLAAALRLAEHHQEAAQRLFMLAVQHNFIQGRRTQHVIAACLYTVCRKEKTPHLLIDYSDVLQENVYLLGSCFLKFTRLLSLTLPIIDPSLYIHRFASRLEFGDKTH--LVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLTEFAETPMGALTAR----QLESADIEAF-----PA-----ADPPSYTRNRQAEVAQQLALTVTDEQRQRERQLLELRQLKVAQIRTRLAELGEDVTAS 341
BLAST of EWM25303.1 vs. NCBI_GenBank
Match: gi|1173929528|gb|OQR82741.1| (transcription factor IIIB [Achlya hypogyna]) HSP 1 Score: 286.189 bits (731), Expect = 9.549e-85 Identity = 154/365 (42.19%), Postives = 226/365 (61.92%), Query Frame = 0
Query: 36 LRCPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMKEAQALQEGKKDFEERNGPGAKEQERL-----ATLKDSSTPSGPGTV 395
L CP C+ T+++ + G +C++C T+VEEN IVSSVEF+E+ GGA +V+GQFV TK+ ++ G G + Y +SR TL NGRR I+QV LRL +V+ A RLF AV+RNF GR+ +V CLY+VCR + SPH+LIDFSD +Q++V+ LG FLKF +L L++ +IDPS+YIHRFA++L LG++ ++ ALRLV+SM+RDW++ GRRPSGICGAAL ++A H T DV +V + T+KKR+ EF TP + ++ +++ ++ I L E DPP+FTR + + + L E PG + + L AT ++++ +GPG +
Sbjct: 4 LVCPT--CQCTEIDTHDASGEAVCVSCGTVVEENTIVSSVEFSES--GGAHSVMGQFVSGTATKSSTNVGTGGKH-YDSESRAATLANGRRRIKQVAGMLRLGDHYVESADRLFGLAVQRNFTHGRRWQAIVTACLYVVCRREKSPHLLIDFSDKLQVSVFQLGAVFLKFCRLLQLSIPLIDPSLYIHRFASQLNLGTQMHVIAIT--ALRLVSSMKRDWMETGRRPSGICGAALLIAARSHNVKCTISDVAGVVSIGEATLKKRLTEFAVTP-TAQLTFDQMGKVEIR--------------LLECDPPAFTRNREKETMETLL-----LEMAPTPGLLQDKELTTMIHATWREATDGAGPGLL 341
BLAST of EWM25303.1 vs. NCBI_GenBank
Match: gi|1173949293|gb|OQR97350.1| (transcription factor IIIB [Thraustotheca clavata]) HSP 1 Score: 285.419 bits (729), Expect = 2.058e-84 Identity = 145/323 (44.89%), Postives = 208/323 (64.40%), Query Frame = 0
Query: 37 RCPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMKEAQAL 359
R P C+ T+++ + G +C++C T+VE N IVSSVEF+E AGG +V+GQFV +KA+ S G G + Y +SR TL NGRR I+QV LRL +V+ A RLF AV+RNF GR+ +VA CLY+VCR + SPH+LIDFSD +Q++V+ LG FLKF +L L++ +IDPS+YIHRFA++L LGS+ ++ ALRLV++++RDWI+ GRRPSG+CGAAL ++A H T DV +V + T+KKR+ EF TP + ++ +++ ++ I L E DPP FTR +++ +AL
Sbjct: 3 RLVCPTCQCTEIDMHDASGEAVCVSCGTVVESNTIVSSVEFSE--AGGGHSVLGQFVSGTASKAHGSVGAGGKH-YDNESRLATLANGRRRIKQVAGMLRLGDHYVESADRLFALAVQRNFTHGRRWQTIVAACLYVVCRREKSPHLLIDFSDKLQVSVFQLGAVFLKFCRLLQLSIPLIDPSLYIHRFASQLNLGSQMHAIAIT--ALRLVSALKRDWIETGRRPSGVCGAALLIAARSHNVKCTLSDVASVVNIGEMTLKKRLIEFSVTP-TAQLTFDQMGKVEIR--------------LLECDPPCFTRNRELETMEAL 305
BLAST of EWM25303.1 vs. NCBI_GenBank
Match: gi|669157772|ref|XP_008614448.1| (hypothetical protein SDRG_10244 [Saprolegnia diclina VS20] >gi|530733804|gb|EQC32046.1| hypothetical protein SDRG_10244 [Saprolegnia diclina VS20]) HSP 1 Score: 283.108 bits (723), Expect = 2.007e-83 Identity = 149/338 (44.08%), Postives = 214/338 (63.31%), Query Frame = 0
Query: 36 LRCPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRFYTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTR----------ALKMKEAQALQEGK 363
L CP C+ T+++ + G +C++C T+VEEN IVSSVEF+E+ GGA +V+GQFV +K ++ G G + Y +SR TTL NGRR I+QV LRL +V+ A RLF AV+RNF GR+ +V CLY+VCR + SPH+LIDFSD +QI+V+ LG FLKF +L L++ +IDPS+YIHRFA++L LG++ ++ ALRLV++M+RDW++ GRRPSGICGAAL ++A H T DV +V + T++KR+ EF TP + ++ +++ ++ I L E DPP+FTR L+M ++ L EGK
Sbjct: 4 LVCPT--CQCTEIDVYDASGEAVCVSCGTVVEENTIVSSVEFSES--GGAHSVMGQFVSGSASKPSTNIGTGGKH-YDSESRATTLANGRRRIKQVAGMLRLGDHYVESADRLFGLAVQRNFTHGRRWQAIVTACLYVVCRREKSPHLLIDFSDKLQISVFQLGAVFLKFCRLLQLSIPLIDPSLYIHRFASQLNLGTQMHVIAIT--ALRLVSAMKRDWMETGRRPSGICGAALLIAARSHNVKCTMTDVAGVVSIGEVTLRKRLAEFAVTP-TAQLTFDQMGKVEIK--------------LLECDPPAFTRNREKETMESLLLEMAPSKGLLEGK 319
BLAST of EWM25303.1 vs. NCBI_GenBank
Match: gi|676389533|ref|XP_009038045.1| (hypothetical protein AURANDRAFT_71825 [Aureococcus anophagefferens] >gi|323451551|gb|EGB07428.1| hypothetical protein AURANDRAFT_71825 [Aureococcus anophagefferens]) HSP 1 Score: 293.893 bits (751), Expect = 2.373e-83 Identity = 159/338 (47.04%), Postives = 211/338 (62.43%), Query Frame = 0
Query: 36 LRCPNPDCRGTDLEYSEPDGATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRF----------YTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSEQEQTQVSQLALRLVASMQRDWIQAGRRPSGICGAALYLSAVYHEKPRTYKDVGRIVRVSPDTIKKRVDEFERTPISGMMSREELAEMAISDFEDLTRRQGPGSYLGEADPPSFTRALKMKE-AQALQEG 362
++CPNP+C D+++ E G +C+ C T+ EE+ IVSS+EF E+ GGAS+VVGQFV TK + G + R SR+TTL GRR I QV S LRL FVD A RLF A +RNF QGRKT+ VV CLY++CR + S HMLIDFSD +Q+NVY LG FLKF++L L L +IDPS+YIHRFAA+LELG + V+ ALR+V M+RDWI+ GRRP+G+C AAL + A H RT DV + +RV T+ KR+ +F+ TP A++++++F RR L E PPSF RA + +E A+ LQ+G
Sbjct: 390 MKCPNPECGSIDIDWQEAGGDAVCVRCGTVCEESTIVSSIEFAESG-GGASSVVGQFVSASCTKPFGGLGGSGWGGSRGGGRPRYGFLRSSRETTLATGRRKIAQVASSLRLGAHFVDGAHRLFGMAAQRNFTQGRKTLHVVCACLYVMCRREKSAHMLIDFSDVLQVNVYALGATFLKFRRLLNLELPIIDPSLYIHRFAAKLELG--DKCGAVATTALRVVQRMKRDWIETGRRPAGVCAAALLVGARAHGFHRTQDDVVKALRVCGMTVAKRLADFQATPA---------AQLSLAEF---NRRSDD---LAEEHPPSFQRAERSRENARRLQQG 709 The following BLAST results are available for this feature:
BLAST of EWM25303.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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