EWM25306.1, cds5362 (CDS) Nannochloropsis gaditana

Overview
NameEWM25306.1
Unique Namecds5362
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:834167..835633 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25306.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100135g11.5863.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:834167..835633 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008418protein-N-terminal asparagine amidohydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR026750NTAN1
Homology
BLAST of EWM25306.1 vs. NCBI_GenBank
Match: gi|585107061|gb|EWM25306.1| (hypothetical protein Naga_100135g11 [Nannochloropsis gaditana])

HSP 1 Score: 989.949 bits (2558), Expect = 0.000e+0
Identity = 488/488 (100.00%), Postives = 488/488 (100.00%), Query Frame = 0
Query:    1 MPLLSPSSPSSGTSLIENVSMEVTSHSHRLEKDINVLFRTALHAKRSPRPLLSASFGQLLVDILKHHLPALLERTRKFANQASCNTLIGHLSAACSASHENKVGAEEIKGRCRRARCLYIMQHEWAVIGPGDKIDYIVSDDATTCHLVGIREPCTGVVGLAHVDAVEVVPDLVAVEDAVQKESMLRSESHAGNALGGFRRPTEPLTLDLFLVGGYEGDSEGGLLTAAILQHFQSTSVHKYNLQLALVSSLNTCTLPSVFSSPSMTPSVPAPLCRSLGFVIEPPRNPAAAAPSKASGSCDLFGAHVLTGDVPESLRGPMRTLRALRLWGRGSRRLVQVRLAHSPGEAGVAAFDQEEIANSSRCSRPQPKSCPSFSCPPSAPSASNSEVSIVINPFRFRCSEDIKALACLEDEALKLETSTSPAIESPSFVSDIRAVLKMNQTAFPEDFFGPRVSQPLLVPLHAVEAATLLTAESKGGEERRGNRRINVT 488
            MPLLSPSSPSSGTSLIENVSMEVTSHSHRLEKDINVLFRTALHAKRSPRPLLSASFGQLLVDILKHHLPALLERTRKFANQASCNTLIGHLSAACSASHENKVGAEEIKGRCRRARCLYIMQHEWAVIGPGDKIDYIVSDDATTCHLVGIREPCTGVVGLAHVDAVEVVPDLVAVEDAVQKESMLRSESHAGNALGGFRRPTEPLTLDLFLVGGYEGDSEGGLLTAAILQHFQSTSVHKYNLQLALVSSLNTCTLPSVFSSPSMTPSVPAPLCRSLGFVIEPPRNPAAAAPSKASGSCDLFGAHVLTGDVPESLRGPMRTLRALRLWGRGSRRLVQVRLAHSPGEAGVAAFDQEEIANSSRCSRPQPKSCPSFSCPPSAPSASNSEVSIVINPFRFRCSEDIKALACLEDEALKLETSTSPAIESPSFVSDIRAVLKMNQTAFPEDFFGPRVSQPLLVPLHAVEAATLLTAESKGGEERRGNRRINVT
Sbjct:    1 MPLLSPSSPSSGTSLIENVSMEVTSHSHRLEKDINVLFRTALHAKRSPRPLLSASFGQLLVDILKHHLPALLERTRKFANQASCNTLIGHLSAACSASHENKVGAEEIKGRCRRARCLYIMQHEWAVIGPGDKIDYIVSDDATTCHLVGIREPCTGVVGLAHVDAVEVVPDLVAVEDAVQKESMLRSESHAGNALGGFRRPTEPLTLDLFLVGGYEGDSEGGLLTAAILQHFQSTSVHKYNLQLALVSSLNTCTLPSVFSSPSMTPSVPAPLCRSLGFVIEPPRNPAAAAPSKASGSCDLFGAHVLTGDVPESLRGPMRTLRALRLWGRGSRRLVQVRLAHSPGEAGVAAFDQEEIANSSRCSRPQPKSCPSFSCPPSAPSASNSEVSIVINPFRFRCSEDIKALACLEDEALKLETSTSPAIESPSFVSDIRAVLKMNQTAFPEDFFGPRVSQPLLVPLHAVEAATLLTAESKGGEERRGNRRINVT 488          
BLAST of EWM25306.1 vs. NCBI_GenBank
Match: gi|553192139|ref|XP_005855520.1| (n-terminal asparagine amidohydrolase [Nannochloropsis gaditana CCMP526] >gi|422293539|gb|EKU20839.1| n-terminal asparagine amidohydrolase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 989.564 bits (2557), Expect = 0.000e+0
Identity = 487/488 (99.80%), Postives = 488/488 (100.00%), Query Frame = 0
Query:    1 MPLLSPSSPSSGTSLIENVSMEVTSHSHRLEKDINVLFRTALHAKRSPRPLLSASFGQLLVDILKHHLPALLERTRKFANQASCNTLIGHLSAACSASHENKVGAEEIKGRCRRARCLYIMQHEWAVIGPGDKIDYIVSDDATTCHLVGIREPCTGVVGLAHVDAVEVVPDLVAVEDAVQKESMLRSESHAGNALGGFRRPTEPLTLDLFLVGGYEGDSEGGLLTAAILQHFQSTSVHKYNLQLALVSSLNTCTLPSVFSSPSMTPSVPAPLCRSLGFVIEPPRNPAAAAPSKASGSCDLFGAHVLTGDVPESLRGPMRTLRALRLWGRGSRRLVQVRLAHSPGEAGVAAFDQEEIANSSRCSRPQPKSCPSFSCPPSAPSASNSEVSIVINPFRFRCSEDIKALACLEDEALKLETSTSPAIESPSFVSDIRAVLKMNQTAFPEDFFGPRVSQPLLVPLHAVEAATLLTAESKGGEERRGNRRINVT 488
            MPLLSPSSPSSGTSLIENVSMEVTSHSHRLEKDINVLFRTALHAKRSPRPLLSASFGQLLVDILKHHLPALLERTRKFANQASCNTLIGHLSAACSASHENKVGAEEIKGRCRRARCLYIMQHEWAV+GPGDKIDYIVSDDATTCHLVGIREPCTGVVGLAHVDAVEVVPDLVAVEDAVQKESMLRSESHAGNALGGFRRPTEPLTLDLFLVGGYEGDSEGGLLTAAILQHFQSTSVHKYNLQLALVSSLNTCTLPSVFSSPSMTPSVPAPLCRSLGFVIEPPRNPAAAAPSKASGSCDLFGAHVLTGDVPESLRGPMRTLRALRLWGRGSRRLVQVRLAHSPGEAGVAAFDQEEIANSSRCSRPQPKSCPSFSCPPSAPSASNSEVSIVINPFRFRCSEDIKALACLEDEALKLETSTSPAIESPSFVSDIRAVLKMNQTAFPEDFFGPRVSQPLLVPLHAVEAATLLTAESKGGEERRGNRRINVT
Sbjct:    1 MPLLSPSSPSSGTSLIENVSMEVTSHSHRLEKDINVLFRTALHAKRSPRPLLSASFGQLLVDILKHHLPALLERTRKFANQASCNTLIGHLSAACSASHENKVGAEEIKGRCRRARCLYIMQHEWAVVGPGDKIDYIVSDDATTCHLVGIREPCTGVVGLAHVDAVEVVPDLVAVEDAVQKESMLRSESHAGNALGGFRRPTEPLTLDLFLVGGYEGDSEGGLLTAAILQHFQSTSVHKYNLQLALVSSLNTCTLPSVFSSPSMTPSVPAPLCRSLGFVIEPPRNPAAAAPSKASGSCDLFGAHVLTGDVPESLRGPMRTLRALRLWGRGSRRLVQVRLAHSPGEAGVAAFDQEEIANSSRCSRPQPKSCPSFSCPPSAPSASNSEVSIVINPFRFRCSEDIKALACLEDEALKLETSTSPAIESPSFVSDIRAVLKMNQTAFPEDFFGPRVSQPLLVPLHAVEAATLLTAESKGGEERRGNRRINVT 488          
BLAST of EWM25306.1 vs. NCBI_GenBank
Match: gi|1191562703|gb|OTF72451.1| (hypothetical protein BLA29_005191 [Euroglyphus maynei])

HSP 1 Score: 65.855 bits (159), Expect = 3.829e-8
Identity = 43/149 (28.86%), Postives = 68/149 (45.64%), Query Frame = 0
Query:  113 RRARCLYIMQHEWAVIGPGD-KIDYIVSDDATTCHLVGIREPCTGVVGLAHVDAVEVVPDLVAVEDAVQKESMLRSESHAGNALGGFRRPT-------EPLTLDLFLVGGYEGDSE-GGLLTAAILQHFQSTSVHKYNLQLALVSSLNT 252
            R+ R LY+MQHE+A++     KID I++DD TTC  V +R   T  + L H D +          D   ++     E   G       +PT       + +  D+F++GGY+ +      L   IL  F     + ++++L  V S NT
Sbjct:   67 RKGRVLYVMQHEYAIVNAKSAKIDTILTDDMTTCVAVILRSHQTSAICLCHFDQIN--------HDVDTQKFKKICEQMCGRKQHSTYQPTSTVDYRNQEIAFDIFIIGGYKDERNISDRLVMDILTMFNQIRPYLFHIRLIHVGSQNT 207          
BLAST of EWM25306.1 vs. NCBI_GenBank
Match: gi|1042262673|ref|XP_017336116.1| (PREDICTED: protein N-terminal asparagine amidohydrolase isoform X1 [Ictalurus punctatus])

HSP 1 Score: 64.6994 bits (156), Expect = 7.803e-8
Identity = 77/326 (23.62%), Postives = 123/326 (37.73%), Query Frame = 0
Query:  118 LYIMQHEWAVIGPGDK-IDYIVSDDATTCHLVGIREPCTGVVGLAHVDAVEVVPDLVAVEDAVQKESMLRSESHAGNALGGFRRPTEPLTLDLFLVGGYEGDSE-GGLLTAAILQHFQSTSVHKYNLQLALVSSLNTCTLPSVFSSPSMTPSVPAPLCRSLGFVIEPPRNPAAAAPSKASGSCDLFGAHVLTGDVPESL---RGPMRTLRALRLWGRGSRRLVQVRLAHSPGEAGVAAFDQEEIANSSRCSRPQPKSCPSFSCPPSAPSASNSEVSIVINPFRFRCSEDIKALACLEDEALKLETSTSPAIESPSFVSDIRAVLKM 438
            LY+ Q E+A   P D  +  I S+DATTCHLV +R   +G   LAH+D  +   +++ +                 NA+     P +P  L+L LVGG++ D++    L+  IL  FQ     + +L+   ++ +N            +T  +  P+   +                         G +V TG+V  ++   RGP   LR+ R                        +F   +IAN    S+ Q K                      I P R+  + DI      +DE +    STSP  E P FV  I++ ++ 
Sbjct:   47 LYVQQREFAATTPADSSVSIIGSEDATTCHLVVLRHTGSGATCLAHLDGSKTWTEVLLLV----------------NAVTALSNPAKPGRLELHLVGGFDDDNKMSHKLSCEILAEFQKQK-EEIHLETCCITDMNDV----------VTDGIHRPIIYGI-------------------------GVNVKTGEVFPAVFPHRGPAEDLRSAR------------------------SFTGGQIANVYDSSKEQLK----------------------IGPCRWPPNMDIAFWLDEDDETILQCLSTSPYAEPPHFVQHIKSTIRF 274          
BLAST of EWM25306.1 vs. NCBI_GenBank
Match: gi|597738383|ref|XP_007231409.1| (PREDICTED: protein N-terminal asparagine amidohydrolase [Astyanax mexicanus])

HSP 1 Score: 62.7734 bits (151), Expect = 3.741e-7
Identity = 86/349 (24.64%), Postives = 124/349 (35.53%), Query Frame = 0
Query:  102 KVGAEEIKGR----CRRARCLYIMQHEWAVIGPGDK-IDYIVSDDATTCHLVGIREPCTGVVGLAHVDAVEV---VPDLVAVEDAVQKESMLRSESHAGNALGGFRRPTEPLTLDLFLVGGYEGDSEGG-LLTAAILQHFQSTSVHKYNLQLALVSSLNTCTLPSVFSSPSMTPSVPAPLCRSLGFVIEPPRNPAAAAPSKASGSCDLFGAHVLTGDV-PESL--RGPMRTLRALRLWGRGSRRLVQVRLAHSPGEAGVAAFDQEEIANSSRCSRPQPKSCPSFSCPPSAPSASNSEVSIVINPFRFRCSEDIKALACLEDEALKLETSTSPAIESPSFVSDIRAVLKM 438
            K  A+E + R        R LY+ Q E+A   P D  +  I S DATTCHLV +R   +G   LAH D       VP LV                   NA+     P +   L+L LVGG++ DS+    L+  IL  FQ     + +L+   ++ +N            +T  +  P+   +                         G +V TG+V P S   RGP   LR+ R +  G                        E+A     S+ Q                      I I P R+  + DI      +D  +    STSP  E P FV  I++ ++ 
Sbjct:   27 KENAKEFRSRPALTVEPKRLLYVQQREFAATTPADSSVSVIGSGDATTCHLVVLRHTGSGATCLAHCDGSSTFTEVPLLV-------------------NAVTSLSNPAKEGRLELHLVGGFDDDSKTSHTLSLTILAAFQKQK-DEIHLETCCITDMNDV----------VTDGIHRPIVYGI-------------------------GVNVKTGEVFPASFPQRGPAEDLRSARTFTGG------------------------EMAEVYDSSKEQ----------------------IKIGPCRWTPNRDIAFWLSEDDNTILQFLSTSPYAEPPHFVQHIKSTIQF 274          
The following BLAST results are available for this feature:
BLAST of EWM25306.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 5
Match NameE-valueIdentityDescription
gi|585107061|gb|EWM25306.1|0.000e+0100.00hypothetical protein Naga_100135g11 [Nannochlorops... [more]
gi|553192139|ref|XP_005855520.1|0.000e+099.80n-terminal asparagine amidohydrolase [Nannochlorop... [more]
gi|1191562703|gb|OTF72451.1|3.829e-828.86hypothetical protein BLA29_005191 [Euroglyphus may... [more]
gi|1042262673|ref|XP_017336116.1|7.803e-823.62PREDICTED: protein N-terminal asparagine amidohydr... [more]
gi|597738383|ref|XP_007231409.1|3.741e-724.64PREDICTED: protein N-terminal asparagine amidohydr... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5375rna5375Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications