EWM25314.1, cds5361 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25314.1 vs. NCBI_GenBank
Match: gi|585107069|gb|EWM25314.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0 Query: 1 MGMVHKITPDLLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIMGKFS 330 MGMVHKITPDLLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIMGKFS Sbjct: 1 MGMVHKITPDLLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIMGKFS 330
BLAST of EWM25314.1 vs. NCBI_GenBank
Match: gi|553192143|ref|XP_005855521.1| (1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526] >gi|422293540|gb|EKU20840.1| 1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0 Query: 1 MGMVHKITPDLLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLG 311 MGMVHKITPDLLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLG Sbjct: 9 MGMVHKITPDLLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLG 319
BLAST of EWM25314.1 vs. NCBI_GenBank
Match: gi|514686056|ref|XP_004990606.1| (oxidoreductase [Salpingoeca rosetta] >gi|326431692|gb|EGD77262.1| oxidoreductase [Salpingoeca rosetta]) HSP 1 Score: 275.789 bits (704), Expect = 6.174e-88 Identity = 153/305 (50.16%), Postives = 195/305 (63.93%), Query Frame = 0 Query: 24 VLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFR--TEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIM 326 +LA++ Y L VF K FPV GAI+ITG STGIG HAA LA++GY VY TVRK ADV++++ G+ L PI+MDV + I + +TI K LIGLVNNAG++ + PLE H L +RSMF+++V G + +TQ LP IR NKGRIVN+ S+ + +P A+Y A+K +EG++D LRRE+ F SVSIV+PAYV+TAI K T VS E+ TY +FF EKR+K A D P VTT AITHALTS P TRYIVAN GIPA + WL PDRL D ++ Sbjct: 12 ILAVLLYLLFVFPV-KYFPVH-DSGAILITGTSTGIGRHAAVELAKKGYTVYATVRKQADVDSLKKEGVNTLIPIVMDVTKPDQIASAVDTI----KKGGHKLIGLVNNAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASKSTGEAAATRWVSREMQDTYAWFFADFEEKRLKGEALADG---PEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGDIVL 307
BLAST of EWM25314.1 vs. NCBI_GenBank
Match: gi|553181318|ref|XP_005853543.1| (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422295513|gb|EKU22812.1| 3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 255.373 bits (651), Expect = 9.210e-80 Identity = 138/314 (43.95%), Postives = 199/314 (63.38%), Query Frame = 0 Query: 18 GLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALG-----LPNLRPIIMDVAQAKSIENGAETILAEL-SKNNIPLIGLVNNAGVA-QKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKV-TQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLAD 323 LL AF+ +I +L R+ +PVPP GA+V+TGASTGIG HAA LAR G++V+ VRK D E ++A N+ PII+DV + + I+ +T+ + L S PL+GLVNNAGV P+EF + DLR +FD++ G + T+ L +RA+KGR++N+SS+ L + P Y ASK A+E SD LR E+ + SVS+V+PAYV +AIF K+ T+ +T VS ++M YG+ + R ++KASPP+VT+DAI HALT+ +P TRY+VANV G+ A +GW++W+ DR+ D Sbjct: 8 ALLVAFLASIP--YLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARAGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRVKETADSVSEKVMEVYGHLVQNPTYT--RRCIEKASPPTVTSDAILHALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKD 317
BLAST of EWM25314.1 vs. NCBI_GenBank
Match: gi|553184892|ref|XP_005854162.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422294895|gb|EKU22195.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|585104004|gb|EWM23126.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 253.447 bits (646), Expect = 3.076e-79 Identity = 139/297 (46.80%), Postives = 193/297 (64.98%), Query Frame = 0 Query: 35 FIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQ--GYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVD-FDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYG-YFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIMG 327 F+ RK FPV G AI++TGASTGIGNHAA HLA VY VRK D E I+AL L NL P+ +D S++ +A L ++P+IGL+NNAGV+ P+EF P+ LR + + +V+GP LTQ+L+P++RA++GR+V +SS+ V L T AY ASK A E +SD LR EL F SVS+V+PAYV T IF K+ Q I+T +SPE+ + YG +F+R ++ + +A + K P VT+ AI HAL + YP TRY+VAN +G+ A ++ W+ PDRLAD++ G Sbjct: 24 FLTRKSFPVHTTG-AILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAA----VAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETL--LSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWLKG 313
BLAST of EWM25314.1 vs. NCBI_GenBank
Match: gi|585102158|gb|EWM21817.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 252.292 bits (643), Expect = 1.508e-78 Identity = 137/314 (43.63%), Postives = 198/314 (63.06%), Query Frame = 0 Query: 18 GLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALG-----LPNLRPIIMDVAQAKSIENGAETILAEL-SKNNIPLIGLVNNAGVA-QKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKV-TQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLAD 323 LL AF+ +I +L R+ +PVPP GA+V+TGASTGIG HAA LAR G++V+ VRK D E ++A N+ PII+DV + + I+ +T+ + L S PL+GLVNNAGV P+EF + DLR +FD++ G + T+ L +RA+KGR++N+SS+ L + P Y ASK A+E SD LR E+ + SVS+V+PAYV +AIF K+ T+ +T VS ++M YG+ + R ++KASPP+VT+DAI ALT+ +P TRY+VANV G+ A +GW++W+ DR+ D Sbjct: 8 ALLVAFLASIP--YLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYT--RRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKD 317
BLAST of EWM25314.1 vs. NCBI_GenBank
Match: gi|167525509|ref|XP_001747089.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163774384|gb|EDQ88013.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 248.44 bits (633), Expect = 3.554e-77 Identity = 129/281 (45.91%), Postives = 175/281 (62.28%), Query Frame = 0 Query: 48 GAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIMGK 328 G +++TGAS+GIG HAA LA+ GY VY TVRK D I+ LG+ L PIIMDV ++ I+N ETI SK + PLI LVNNAG++ + PLE + + +R+ F++++ G +E TQ LP +RANKGRI+N+ S+ LV + A Y +K A+EGISD LRREL SVS+V+PAYV T I K + + + S E++ Y +FF + R A + A P TT+AI A+ SP P TRY+VAN IPA+ + WL PDR D IM + Sbjct: 33 GVVLVTGASSGIGRHAAIELAKLGYEVYGTVRKERDANDIRGLGIKTLHPIIMDVTNSEQIKNAVETI----SKLDQPLIALVNNAGISSRAPLEAYDMNRVRNTFEVNIFGLVETTQAFLPLLRANKGRIINIGSVAGLVGMEGSAVYSGTKFALEGISDSLRRELFPLGVSVSLVEPAYVKTEIVHKSSGAQSAEHWASKEMLEVYDHFFSVADEKRQR-AFEHADTPECTTNAIVDAIRSPQPRTRYVVANTHKIPAWITTGMTWLLPDRAVDAIMRR 308
BLAST of EWM25314.1 vs. NCBI_GenBank
Match: gi|553194466|ref|XP_005855962.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422293105|gb|EKU20405.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 230.72 bits (587), Expect = 8.659e-70 Identity = 128/301 (42.52%), Postives = 178/301 (59.14%), Query Frame = 0 Query: 48 GAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPN---------------------LRPIIMDVAQAKSIENGAETILAELSK-NNIPLIGLVNNAGV-AQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIR-ANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTT-YGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLAD 323 G +++TGASTGIG HAA +LARQG++V+ VRKPAD EA+ L L +I+D+ + I ++ ELS+ +P +GLVNNAGV P+EF PL R+ F+++ GPL +TQ LP +R A +GRI+N+SS+ +V P GA Y +K A+E +SD LR EL SVS++QP Y+ + IF K + +++ PE + YG+ + +K A + KAS P V + AI HALTSPYP TRY+V NV+G PA+WLGW +WL DRL D Sbjct: 52 GGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLKAYLDEESKQTSKSRSRGKVSPAKQGVLHYLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIINVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPEECSALYGHLYTVDK---TNALIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMD 349
BLAST of EWM25314.1 vs. NCBI_GenBank
Match: gi|585111466|gb|EWM28976.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 229.95 bits (585), Expect = 2.167e-69 Identity = 129/301 (42.86%), Postives = 177/301 (58.80%), Query Frame = 0 Query: 48 GAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPN---------------------LRPIIMDVAQAKSIENGAETILAELSK-NNIPLIGLVNNAGV-AQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIR-ANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSP-EIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLAD 323 G +++TGASTGIG HAA +LARQG++V+ VRKPAD EA+ L L +I+D+ + I ++ ELS+ +P +GLVNNAGV P+EF PL R+ F+++ GPL +TQ LP +R A +GRIVN+SS+ +V P GA Y +K A+E +SD LR EL SVS++QP Y+ + IF K + +++ P E YG+ + +K A + KAS P V + AI HALTSPYP TRY+V NV+G PA+WLGW +WL DRL D Sbjct: 63 GGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVDK---TNALIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMD 360
BLAST of EWM25314.1 vs. NCBI_GenBank
Match: gi|553192526|ref|XP_005855590.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422293482|gb|EKU20782.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 226.098 bits (575), Expect = 1.266e-68 Identity = 117/293 (39.93%), Postives = 176/293 (60.07%), Query Frame = 0 Query: 35 FIFRKRFPVPPKGGA-IVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIM 326 + R+ +P PP GGA +V++GASTGIG AA HLA ++VY VRK D E ++++G L P+I+DV SI+ I A+ ++ IP+ GLVNNAG+ +E H + ++ ++D++V G L LTQ+ LP +RA GRIV +SSI + +P + Y +SK A+E +SDGLR EL ++ SV++VQP V +AIF+K + K+ P + YG+ K + + KA P TT AI AL YP TR +VAN+ G+PA + ++ + PDR+ D ++ Sbjct: 20 YASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLA-DDFVVYAGVRKEKDAEMLRSVGKSTLVPVILDVTSQDSIDEAYVKITADAAERGIPVWGLVNNAGIMTASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDPRELKVYGHMI---KEGSTDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKML 308 The following BLAST results are available for this feature:
BLAST of EWM25314.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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