EWM25309.1, cds5360 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25309.1 vs. NCBI_GenBank
Match: gi|585107064|gb|EWM25309.1| (hypothetical protein Naga_100135g13 [Nannochloropsis gaditana]) HSP 1 Score: 471.855 bits (1213), Expect = 4.936e-168 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
Query: 1 MAKYHILLLIGLLGATGKGVAAFLLPVSLGPASDAQLPSPPLATTLGYGIPRSPFILSPLYAAADTAMDGSSDEDDEEVVPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFNEQREAEEARKGKKPDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDQDVIQKYMADAEVLQLMARFQKLSAEAGLDPSKFPPPPGME 238
MAKYHILLLIGLLGATGKGVAAFLLPVSLGPASDAQLPSPPLATTLGYGIPRSPFILSPLYAAADTAMDGSSDEDDEEVVPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFNEQREAEEARKGKKPDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDQDVIQKYMADAEVLQLMARFQKLSAEAGLDPSKFPPPPGME
Sbjct: 1 MAKYHILLLIGLLGATGKGVAAFLLPVSLGPASDAQLPSPPLATTLGYGIPRSPFILSPLYAAADTAMDGSSDEDDEEVVPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFNEQREAEEARKGKKPDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDQDVIQKYMADAEVLQLMARFQKLSAEAGLDPSKFPPPPGME 238
BLAST of EWM25309.1 vs. NCBI_GenBank
Match: gi|551546436|ref|XP_005761135.1| (hypothetical protein EMIHUDRAFT_371912 [Emiliania huxleyi CCMP1516] >gi|551564867|ref|XP_005768960.1| hypothetical protein EMIHUDRAFT_370338 [Emiliania huxleyi CCMP1516] >gi|485609811|gb|EOD08706.1| hypothetical protein EMIHUDRAFT_371912 [Emiliania huxleyi CCMP1516] >gi|485619790|gb|EOD16531.1| hypothetical protein EMIHUDRAFT_370338 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 107.457 bits (267), Expect = 2.707e-25 Identity = 65/166 (39.16%), Postives = 98/166 (59.04%), Query Frame = 0
Query: 56 ILSPLYAAADTAMDGSSDEDDEEVVPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFNEQREAEEARKGKKPDFDWDA---AKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDQDVIQKYMADAEVLQLMARFQ 218
I P A + ++DED +M+VSE+KAELDLR + GV+++ EL +L AR +G A P+I+D+FN+ E +P D DA A A DG LPGG+ PE L KLT E+M ++ NP++Q++MK VMS + + MAD +V +++ +F+
Sbjct: 30 IFGPRSLHARLCTEPAADEDATYEACMRMRVSELKAELDLRKQSYEGVMEKDELARMLADARSQGLADPDIVDSFNKANL--ENAYNPQPAVDPDAVAEAVASDGGLPGGMSPETLMKLTQDPELMAMLRNPKMQDVMKKVMSSGPEAAAEMMADPDVAEMLEKFK 193
BLAST of EWM25309.1 vs. NCBI_GenBank
Match: gi|922852894|gb|KOO21548.1| (conserved unknown protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 105.916 bits (263), Expect = 5.453e-23 Identity = 73/177 (41.24%), Postives = 103/177 (58.19%), Query Frame = 0
Query: 51 PRSPFILSPLYAAADTAMDGSSDEDDEEVVPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFN----EQREAEEARKGKKP--DFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKD-QDVIQKYMADAEVLQLMARFQKL 220
PR+P S ++A+ D A+D S ++ MKVSEIKAELDLR V G+ ++ EL +L KAR EG+A P ++D FN EQ + +P D D D A A DG LPGG+ P+ LQ T E+M ++ NP+LQ+LM+ +M+ Q + +DAE L++RFQ L
Sbjct: 245 PRAP-PRSRIFASDDAAIDVESVKE-----CMGMKVSEIKAELDLRKVKWDGLFEKEELAKVLAKARREGRADPLLIDQFNTMSVEQAWEATPQTTSEPAADVDLDEATAADGTLPGGMSPDMLQAATQDPEIMALLRNPKLQDLMRKMMAAGPQAASEMLSSDAEARMLLSRFQAL 415
BLAST of EWM25309.1 vs. NCBI_GenBank
Match: gi|224006704|ref|XP_002292312.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971954|gb|EED90287.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 100.908 bits (250), Expect = 1.682e-22 Identity = 57/146 (39.04%), Postives = 86/146 (58.90%), Query Frame = 0
Query: 80 VPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFNEQREAEEARKGKK----PDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDQDVIQKYMA-DAEVLQLMARFQKL 220
+PG+MK+SEIK+ELDLR V DR LE L +AR GKA P ++D FN +R E KG+ D ++A GDG LPGG+ P+ L+ + S E++ ++ +P++QE+MK VM QD ++ M D E + + + +
Sbjct: 67 LPGQMKISEIKSELDLRKVNYNDCFDREALEIRLNEARCSGKADPSLIDEFN-RRNLEANVKGEDALEVTDNMLESAVGGDGTLPGGLPPDMLKSMMSDPELVNMLRSPKMQEVMKLVMEGGQDALEDAMTNDKEAYECVTKLNSI 211
BLAST of EWM25309.1 vs. NCBI_GenBank
Match: gi|298711330|emb|CBJ32476.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 99.3673 bits (246), Expect = 1.237e-21 Identity = 65/165 (39.39%), Postives = 93/165 (56.36%), Query Frame = 0
Query: 72 SDEDDEEVVPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFN----EQREAEEARKGKKPDF----DWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDQDVIQKYMADAEVLQLMARFQKLSAEAGLDP 228
+D D E V KM+ SEIKAELD+RGV G+ ++ EL L++AR G+A P I+D FN E R E G D A DG LPGG+ PE L K+ S+ E+M +M NP+LQE+MK VM+ + +++ D E +L+ + + +A G+ P
Sbjct: 86 TDPDAEGVA--KMRASEIKAELDMRGVGYTGIFEKDELVERLIEARSLGRADPSIIDDFNKENLENRMDPERAAGFADDLLNEEKLKDLTAADGTLPGGMTPEMLSKMVSNPELMVLMQNPKLQEIMKKVMADGPEAMEELQGDPETAELLKKLE--AAMGGMQP 246
BLAST of EWM25309.1 vs. NCBI_GenBank
Match: gi|397610153|gb|EJK60682.1| (hypothetical protein THAOC_18921 [Thalassiosira oceanica]) HSP 1 Score: 98.5969 bits (244), Expect = 1.324e-21 Identity = 77/226 (34.07%), Postives = 114/226 (50.44%), Query Frame = 0
Query: 13 LGATGKGVAAF--------LLPVSLGPASDAQLPSPPLATTLGYGIPRSPFILSPLYAAADTAMD-GSSDEDDEEVVPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFNEQREAEEARKGKK---PDFDWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDQDVIQKYMA-DAEVLQLMARFQKLSAEAG 225
+G G VA F LL S P + A PSP S + SP + ++ G SD+D E PG+M++SEIK+ELDL DR LE L AR +G+A I+D FN +R E + KG D D A AGDG LPGG+ PE L+ + + +++ ++ +P++QE+MK VMS+ Q ++ M D +V + + R ++ G
Sbjct: 12 VGTGGLPVANFEAEMTKLLLLLFSGWPGAMAFCPSP------------SSLVTSPRQSTTLRVVEVGPSDDDVEPAEPGQMRISEIKSELDLY----VDCFDRQSLEERLNDARSQGRADESIIDEFN-KRNLEASVKGDTFEVSDDMIDKATAGDGTLPGGMPPEMLKSMMNDPDLVNMLRSPKMQEIMKIVMSEGQQSLEDRMKEDKDVYECVQRLNQIMGRLG 220
BLAST of EWM25309.1 vs. NCBI_GenBank
Match: gi|1210515463|dbj|GAX25542.1| (hypothetical protein FisN_28Hh010 [Fistulifera solaris]) HSP 1 Score: 91.6633 bits (226), Expect = 4.701e-19 Identity = 52/137 (37.96%), Postives = 83/137 (60.58%), Query Frame = 0
Query: 79 VVPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFNEQREAEEARKGKKPDF---DWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDQDVIQKYMADAEVLQ 212
+ PG M+VSEIKAELDLR ++ D+ L L +AR++G A P IL+ FN Q+ + KK + D +AA A DG +PGG+ P+ QKL ++ E+M ++ + ++QE M +M+ +D ++K + + LQ
Sbjct: 68 IAPGIMRVSEIKAELDLRKISYTDCFDKESLVERLQEARVKGLADPSILEKFNRQKLEADFDPSKKVEIQPDDIEAALANDGTIPGGLTPDMFQKLIANPELMAMLQSTKMQEAMTLMMTGGRDELEKKLKEDPELQ 204
BLAST of EWM25309.1 vs. NCBI_GenBank
Match: gi|1210511697|dbj|GAX29181.1| (hypothetical protein FisN_28Lh010 [Fistulifera solaris]) HSP 1 Score: 90.8929 bits (224), Expect = 9.567e-19 Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = 0
Query: 79 VVPGKMKVSEIKAELDLRGVTSAGVVDRAELEALLLKARIEGKARPEILDTFNEQREAEEARKGKKPDF---DWDAAKAGDGNLPGGVDPEALQKLTSSQEMMEIMSNPRLQELMKAVMSKDQDVIQKYMADAEVLQ 212
+ PG M+VSEIKAELDLR ++ A D+ L L AR +G A P IL+ FN Q+ + KK + D +AA A DG +PGG+ P+ QKL ++ E+M ++ + ++QE M +M+ +D ++K + + LQ
Sbjct: 65 IAPGMMRVSEIKAELDLRKISYADCFDKESLVERLQGARAKGLADPSILEKFNRQKLEADFDPSKKVEIQPDDIEAAVANDGTIPGGLTPDMFQKLIANPELMAMLQSTKMQEAMTLMMTGGRDELEKKLKEDPELQ 201 The following BLAST results are available for this feature:
BLAST of EWM25309.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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