EWM25320.1, cds5355 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25320.1 vs. NCBI_GenBank
Match: gi|585107076|gb|EWM25320.1| (zinc fyve domain containing 21 [Nannochloropsis gaditana]) HSP 1 Score: 800.045 bits (2065), Expect = 0.000e+0 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0
Query: 1 MNSSFSFECQKASPYWGFDGAVMHDTYSILTSLLHLPGIEQARSRSVPYFVVFSLPSNVWRSMISLTNCFSRICPCLNFRDWERRGYETISSGTYLSSVPVSTNDTVVPLQRIKKGGGAALTTSSSDLAAVPVHPAIALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVSAVLGRRQPVSLILSADLKTLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLLPSMAGLRKRIEEERIQRATQERMAMAERQEKDALLAKKREKAAVRHAIADKYGLARR 388
MNSSFSFECQKASPYWGFDGAVMHDTYSILTSLLHLPGIEQARSRSVPYFVVFSLPSNVWRSMISLTNCFSRICPCLNFRDWERRGYETISSGTYLSSVPVSTNDTVVPLQRIKKGGGAALTTSSSDLAAVPVHPAIALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVSAVLGRRQPVSLILSADLKTLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLLPSMAGLRKRIEEERIQRATQERMAMAERQEKDALLAKKREKAAVRHAIADKYGLARR
Sbjct: 1 MNSSFSFECQKASPYWGFDGAVMHDTYSILTSLLHLPGIEQARSRSVPYFVVFSLPSNVWRSMISLTNCFSRICPCLNFRDWERRGYETISSGTYLSSVPVSTNDTVVPLQRIKKGGGAALTTSSSDLAAVPVHPAIALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVSAVLGRRQPVSLILSADLKTLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLLPSMAGLRKRIEEERIQRATQERMAMAERQEKDALLAKKREKAAVRHAIADKYGLARR 388
BLAST of EWM25320.1 vs. NCBI_GenBank
Match: gi|553186420|ref|XP_005854414.1| (zinc fyve domain containing 21 [Nannochloropsis gaditana CCMP526] >gi|422294640|gb|EKU21940.1| zinc fyve domain containing 21 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0 Identity = 322/326 (98.77%), Postives = 324/326 (99.39%), Query Frame = 0
Query: 63 MISLTNCFSRICPCLNFRDWERRGYETISSGTYLSSVPVSTNDTVVPLQRIKKGGGAALTTSSSDLAAVPVHPAIALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVSAVLGRRQPVSLILSADLKTLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLLPSMAGLRKRIEEERIQRATQERMAMAERQEKDALLAKKREKAAVRHAIADKYGLARR 388
MISLTNC SRICPCLNFRDWERRGYETISSGTYLSSVPVSTNDTVVPLQRIKKGGGAALTTSSSDLAAVPVHPAIALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERP+LLY LSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVSAVLGRRQPVSLILSADLKTLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLLPSMAGLRKRIEEERIQRATQERMAMAERQEKDALLAKKREKAA+RHAIADKYGLARR
Sbjct: 1 MISLTNCISRICPCLNFRDWERRGYETISSGTYLSSVPVSTNDTVVPLQRIKKGGGAALTTSSSDLAAVPVHPAIALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPVLLYRLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVSAVLGRRQPVSLILSADLKTLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLLPSMAGLRKRIEEERIQRATQERMAMAERQEKDALLAKKREKAALRHAIADKYGLARR 326
BLAST of EWM25320.1 vs. NCBI_GenBank
Match: gi|957848223|ref|XP_014674613.1| (PREDICTED: zinc finger FYVE domain-containing protein 21-like [Priapulus caudatus]) HSP 1 Score: 98.5969 bits (244), Expect = 2.529e-20 Identity = 60/202 (29.70%), Postives = 97/202 (48.02%), Query Frame = 0
Query: 137 IALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVSAVLGRRQPVSLILSADLKTLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFET-----SGPGQR--QAWVAAIREAARLL 331
++ P +V D+E RC C FDF +RRHHCRRC I+C+ C+ P+ DPVR+C RC KENEF D+ LK LT G + +S V + V+ LS D + L++ +P D P + + + P ++ G S+ ++ GV R+ S P + ++W+ +++A ++
Sbjct: 32 LSEPHWVPDKECSRCTGCQARFDFLKRRHHCRRCGQIYCSVCSGNLTPLPRMCFLDPVRLCARCSTVTTKENEFFDKQLKALTTGSTFKLL-PISDVTMDQFIVTCKLSPDYRFLEIDGMP-----EDTLEPIDVNQVISLKIKCP-NNMQGTSQPTMVTVTFSDQQGVNREITLDTGLPSSPTHKTSRSWIVGLQKAMNMI 226
BLAST of EWM25320.1 vs. NCBI_GenBank
Match: gi|591376635|ref|XP_007062984.1| (PREDICTED: zinc finger FYVE domain-containing protein 21 isoform X2 [Chelonia mydas]) HSP 1 Score: 96.6709 bits (239), Expect = 1.461e-19 Identity = 66/227 (29.07%), Postives = 92/227 (40.53%), Query Frame = 0
Query: 118 GAALTTSSSDLAAVPVHPA------IALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVSAV-------LGRRQPVSLILSADLKTLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLL 331
G L SSS L VP H A + P +V D++ RC C FDF R+HHCRRC FC C S++ P+ DPVR C C KE EF D+ LK L G V RG S L Q + +++ + ++ + P + R + G E+ + F +K AW+AA+ +AA+LL
Sbjct: 9 GKKLVRSSSGLRMVPEHHAARSPFGLDEPPWVPDKDCPRCMQCETKFDFITRKHHCRRCGKCFCDKCCSKKVPLSRMCFVDPVRQCAECALISQKETEFYDKQLKVLMNGATFCVARGTSEKSEMMVCRLSNNQRYLFLDGDSHYEIEIAQISTVQILTEGFTPGGGN--TRATGMLLQYKVPGSEELTQIKFTASEDFNSNKKLSA-------AWLAAMHKAAKLL 226
BLAST of EWM25320.1 vs. NCBI_GenBank
Match: gi|1051161011|ref|XP_017663000.1| (PREDICTED: zinc finger FYVE domain-containing protein 21 isoform X2 [Lepidothrix coronata]) HSP 1 Score: 96.2857 bits (238), Expect = 1.987e-19 Identity = 70/230 (30.43%), Postives = 95/230 (41.30%), Query Frame = 0
Query: 116 GGGAALTTSSSDLAAVPVHPA------IALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVS-------AVLGRRQPVSLILSADLK-TLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLL 331
G L S S L VP H A + P +V D+E RC C FDF R+HHCRRC FC C S++ P+ DPVR C C KE EF D+ LK L G VT G S L Q L+L D ++++ + ++ + P + R + + G EV + F RK S W+AA+ +A +LL
Sbjct: 4 GDAKKLVRSPSGLRMVPEHRAARSPFGLDEPPWVPDKECPRCMQCDTKFDFITRKHHCRRCGKCFCDKCCSKKVPLPRMCFVDPVRQCAECALVSQKETEFYDKQLKVLMNGATFFVTLGTSDKSELMVCRLSSNQRY-LVLDGDSHYEIEIIQISTVQILTEGFTPGGGNT--RAIGMILQYKVPGSEEVTQMKFTAGEDFNCNRKLSAS-------WLAAMHKATKLL 223
BLAST of EWM25320.1 vs. NCBI_GenBank
Match: gi|1190446376|ref|XP_020826795.1| (zinc finger FYVE domain-containing protein 21 isoform X2 [Phascolarctos cinereus]) HSP 1 Score: 96.2857 bits (238), Expect = 2.242e-19 Identity = 67/230 (29.13%), Postives = 95/230 (41.30%), Query Frame = 0
Query: 115 KGGGAALTTSSSDLAAVPVHPAIALP------RYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVSAV-------LGRRQPVSLILSADLKTLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLL 331
+G G L S S L VP H A + P ++V D+E RC C + FDF R+HHCRRC FC C S++ P+ DPVR C C KE EF D+ LK L G VT G S L Q + +++ + ++ + P + R G +V + F + +K Q W+AA+ +AA+LL
Sbjct: 15 RGDGKKLVRSPSGLRMVPEHQAFSSPFGLDEPQWVPDKECPRCMQCDIKFDFITRKHHCRRCGKCFCDKCCSKKVPLPRMCFVDPVRQCAECVLVSQKEMEFYDKQLKVLMNGATFCVTVGTSEKPELMVCRLSNNQRYLFLDGDSHYEIEIAHISTVQILTEGFTPGGGN--ARATGMLLQYKEPGAQDVTQVKFTASEDSNSNKK-------QSATWLAAMHKAAKLL 235
BLAST of EWM25320.1 vs. NCBI_GenBank
Match: gi|543349882|ref|XP_005520148.1| (PREDICTED: zinc finger FYVE domain-containing protein 21 isoform X2 [Pseudopodoces humilis]) HSP 1 Score: 95.9005 bits (237), Expect = 2.310e-19 Identity = 71/230 (30.87%), Postives = 95/230 (41.30%), Query Frame = 0
Query: 116 GGGAALTTSSSDLAAVPVHPA------IALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVS-------AVLGRRQPVSLILSADLK-TLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLL 331
G L S S L VP H A + P +V D+E RC C FDF R+HHCRRC FC C S++ P+ DPVR C C KE EF D+ LK L G VT G S L Q LIL D +++V + ++ + P + R + + G EV + F +K AW+AA+ +A +LL
Sbjct: 4 GDAKKLVRSPSGLRMVPEHRAARSPFGLDEPPWVPDKECPRCMQCDTKFDFITRKHHCRRCGKCFCDKCCSKKVPLPRMCFVDPVRQCAECALVSQKETEFYDKQLKVLMNGATFFVTLGTSDKSELMVCRLSNNQRY-LILDGDSHYEIEIVQISTVQILTEGFTPGGGNT--RAVGMILQYKVPGSEEVTQMKFTAGEDFSCNKKLSA-------AWLAAMHKATKLL 223
BLAST of EWM25320.1 vs. NCBI_GenBank
Match: gi|530584128|ref|XP_005285876.1| (PREDICTED: zinc finger FYVE domain-containing protein 21 isoform X2 [Chrysemys picta bellii]) HSP 1 Score: 95.9005 bits (237), Expect = 2.486e-19 Identity = 66/227 (29.07%), Postives = 92/227 (40.53%), Query Frame = 0
Query: 118 GAALTTSSSDLAAVPVHPA------IALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVSAV-------LGRRQPVSLILSADLKTLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLL 331
G L SSS L VP H A + P +V D++ RC C FDF R+HHCRRC FC C S++ P+ DPVR C C KE EF D+ LK L G +V RG S L Q + +++ + ++ + P + R G E+ + F +K AW+AA+ +AA+LL
Sbjct: 9 GKKLVRSSSGLRMVPEHHAARSPFGLDEPPWVPDKDCPRCMQCETKFDFITRKHHCRRCGKCFCDKCCSKKVPLPRMCFVDPVRQCAECAFISQKETEFYDKQLKVLMNGATFSVARGTSEKSEMMVCRLSNNQRYLFLDGDSHYEIEIAQISTVQILTEGFTPGGGN--TRATGMLLQYKAPGSEELTQMKFTASEDFNSNKKLSA-------AWLAAMHKAAKLL 226
BLAST of EWM25320.1 vs. NCBI_GenBank
Match: gi|350536641|ref|NP_001232489.1| (zinc finger FYVE domain-containing protein 21 [Taeniopygia guttata] >gi|1209982683|ref|XP_021384586.1| zinc finger FYVE domain-containing protein 21 isoform X2 [Lonchura striata domestica] >gi|197127115|gb|ACH43613.1| putative zinc finger FYVE domain containing 21 [Taeniopygia guttata] >gi|1208029628|gb|OWK56102.1| Zinc finger FYVE domain-containing protein 21 [Lonchura striata domestica]) HSP 1 Score: 95.5153 bits (236), Expect = 3.348e-19 Identity = 70/230 (30.43%), Postives = 95/230 (41.30%), Query Frame = 0
Query: 116 GGGAALTTSSSDLAAVPVHPA------IALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVS-------AVLGRRQPVSLILSADLK-TLQVVDLPSLPAYHDASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLL 331
G L S S L VP H A + P +V D+E RC C FDF R+HHCRRC FC C S++ P+ DPVR C C KE EF D+ LK L G VT G S L Q LIL D ++++ + ++ + P + R + + G EV + F +K AW+AA+ +A +LL
Sbjct: 4 GDAKKLVRSPSGLRMVPEHRAARSPFGLDEPPWVPDKECPRCMQCDTKFDFITRKHHCRRCGKCFCDKCCSKKVPLPRMCFVDPVRQCAECALVSQKETEFYDKQLKVLMNGATFFVTLGTSDKSELMVCRLSNNQRY-LILDGDSHYEIEIIQISTVQILTEGFTPGGGNT--RAIGMILQYKVPGSEEVTQMKFTAGEDFSSNKKLSA-------AWLAAMHKATKLL 223
BLAST of EWM25320.1 vs. NCBI_GenBank
Match: gi|1051161008|ref|XP_017662999.1| (PREDICTED: zinc finger FYVE domain-containing protein 21 isoform X1 [Lepidothrix coronata]) HSP 1 Score: 95.9005 bits (237), Expect = 3.349e-19 Identity = 75/246 (30.49%), Postives = 97/246 (39.43%), Query Frame = 0
Query: 116 GGGAALTTSSSDLAAVPVHPA------IALPRYVMDEEVERCFACAVPFDFAQRRHHCRRCRNIFCAACTSRERPILLYMLSDPVRVCLRCGNEVGKENEFVDRHLKGLTEGLEVTVTRGVS-------AVLGRRQPVSLILSAD---------LKTLQVVDLPSLPAYHD--------ASRPHSSHDCPRVLMHFPLVDIGGVSEVGSLSFLILTSTGVRRKFETSGPGQRQAWVAAIREAARLL 331
G L S S L VP H A + P +V D+E RC C FDF R+HHCRRC FC C S++ P+ DPVR C C KE EF D+ LK L G VT G S L Q L+L D + T+Q++ P D S+P + R + + G EV + F RK S W+AA+ +A +LL
Sbjct: 4 GDAKKLVRSPSGLRMVPEHRAARSPFGLDEPPWVPDKECPRCMQCDTKFDFITRKHHCRRCGKCFCDKCCSKKVPLPRMCFVDPVRQCAECALVSQKETEFYDKQLKVLMNGATFFVTLGTSDKSELMVCRLSSNQRY-LVLDGDSHYEIEIIQISTVQILTEGFTPGEKDIHTYTSLLESQPVTEGGNTRAIGMILQYKVPGSEEVTQMKFTAGEDFNCNRKLSAS-------WLAAMHKATKLL 241 The following BLAST results are available for this feature:
BLAST of EWM25320.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|