EWM30136.1, cds534 (CDS) Nannochloropsis gaditana

Overview
NameEWM30136.1
Unique Namecds534
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1339745..1339795 -
Alignment locationCM002455.1:1339468..1339660 -
Alignment locationCM002455.1:1339193..1339345 -
Alignment locationCM002455.1:1338998..1339011 -
Alignment locationCM002455.1:1338861..1338908 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30136.1
Productalpha-soluble nsf attachment protein
Orig transcript idgnl|cribi|Naga_100746g1.8490.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1339745..1339795 -
CM002455.1supercontigCM002455.1:1339468..1339660 -
CM002455.1supercontigCM002455.1:1339193..1339345 -
CM002455.1supercontigCM002455.1:1338998..1339011 -
CM002455.1supercontigCM002455.1:1338861..1338908 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006886intracellular protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR000744NSF_attach
Homology
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|585112790|gb|EWM30136.1| (alpha-soluble nsf attachment protein [Nannochloropsis gaditana])

HSP 1 Score: 313.153 bits (801), Expect = 3.512e-108
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query:    1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPRVCGPVCGELRACR 152
            MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPRVCGPVCGELRACR
Sbjct:    1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPRVCGPVCGELRACR 152          
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|1063488560|ref|XP_007031708.2| (PREDICTED: alpha-soluble NSF attachment protein 2 [Theobroma cacao])

HSP 1 Score: 110.153 bits (274), Expect = 1.751e-26
Identity = 56/139 (40.29%), Postives = 88/139 (63.31%), Query Frame = 0
Query:    1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
            M  Q  RG+   ++A+K L  + LF S  KYEDA++ + KA NCFK+AK+W + G  + K S  H+KL S ++AA A  +AA+CYK    ++AIS L+QA     ++G+     R +K+IAE+YE E + ++A++ Y +
Sbjct:    1 MGDQLARGEDFEKKAEKKLNSWGLFGS--KYEDAADLFDKAANCFKLAKSWDKAGSTYVKLSNCHLKLESKHEAAQAYVDAAHCYKKTATKEAISCLQQAVHMFCDIGRLSMAARYYKEIAELYESEQNIEQAIDYYEK 137          
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|508710737|gb|EOY02634.1| (Alpha-soluble NSF attachment protein 2 [Theobroma cacao])

HSP 1 Score: 110.153 bits (274), Expect = 1.846e-26
Identity = 56/139 (40.29%), Postives = 88/139 (63.31%), Query Frame = 0
Query:    1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
            M  Q  RG+   ++A+K L  + LF S  KYEDA++ + KA NCFK+AK+W + G  + K S  H+KL S ++AA A  +AA+CYK    ++AIS L+QA     ++G+     R +K+IAE+YE E + ++A++ Y +
Sbjct:    1 MGDQLARGEDFEKKAEKKLNSWGLFGS--KYEDAADLFDKAANCFKLAKSWDKAGSTYVKLSNCHLKLESKHEAAQAYVDAAHCYKKTATKEAISCLQQAVNMFCDIGRLSMAARYYKEIAELYESEQNIEQAIDYYEK 137          
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|551541592|ref|XP_005759073.1| (hypothetical protein EMIHUDRAFT_258834, partial [Emiliania huxleyi CCMP1516] >gi|485607016|gb|EOD06644.1| hypothetical protein EMIHUDRAFT_258834, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 105.531 bits (262), Expect = 4.360e-26
Identity = 54/133 (40.60%), Postives = 84/133 (63.16%), Query Frame = 0
Query:    3 SQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVE 135
            SQ D+ +A +E+A+K L  ++LF    KYEDA+E YTKA N FKV+K W + G  F K ++  +K  S ++AA A  +AANCYK  + + A  + ++A     +LG+F    ++ K+IAE++E EG+   A+E
Sbjct:    2 SQGDKARALVEKAEKKLASWSLFGGGSKYEDAAEMYTKAANLFKVSKCWNDAGACFEKTAQCALKSDSPHEAATAHTDAANCYKKTDAKGAPPTYKEAIGIHIDLGRFPTAAKLQKEIAELHEGEGNLPLAME 134          
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|72082731|ref|XP_785670.1| (PREDICTED: alpha-soluble NSF attachment protein [Strongylocentrotus purpuratus])

HSP 1 Score: 108.997 bits (271), Expect = 4.867e-26
Identity = 64/153 (41.83%), Postives = 89/153 (58.17%), Query Frame = 0
Query:    1 MASQRDRGKAHMEEADKALKRF-----ALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEG-SYDEAVENYPRVCGPVCGE 147
            MA    +GK  M +ADK LK       ++F   QK E+A E Y +A N FK+AK W E G AF +A+ + + L S ++AA +  +A +CYK V+P+ AISSL+QA    T+ GKF    + +  IAEIYE E    D+A+ENY +      GE
Sbjct:    1 MADNEVKGKQFMADADKKLKSSQGFFGSMFGGPQKQEEACELYQRAANMFKMAKKWQEAGDAFCRAATVSISLDSKHEAATSYVDAGSCYKKVDPKKAISSLQQAIEIYTDKGKFTMAAKHYISIAEIYENELIELDKAIENYEKAADFYKGE 153          
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|763773595|gb|KJB40718.1| (hypothetical protein B456_007G074600 [Gossypium raimondii])

HSP 1 Score: 107.071 bits (266), Expect = 5.910e-26
Identity = 54/139 (38.85%), Postives = 87/139 (62.59%), Query Frame = 0
Query:    1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
            M  Q  RG+   + A+K L  ++ F S  KYEDA++ + KA N FK+AK+W   G  + K +  H+KL ST++AA A   AA+CYK  + ++AIS L+QA     ++G+     R +K+IAE+YE E + ++A+++Y +
Sbjct:    1 MGDQSTRGEEFEKNAEKKLNSWSFFGS--KYEDAADLFDKAANFFKLAKSWDRAGSIYVKLANCHLKLESTHEAAQAFVSAAHCYKKTSTKEAISCLQQAVNMFCDIGRLSMAARYYKEIAELYESEQNIEQAIDHYEK 137          
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|743818178|ref|XP_010931145.1| (PREDICTED: alpha-soluble NSF attachment protein 2-like [Elaeis guineensis])

HSP 1 Score: 105.145 bits (261), Expect = 1.312e-25
Identity = 57/139 (41.01%), Postives = 82/139 (58.99%), Query Frame = 0
Query:    1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
            MA Q  RG    ++A+K L  + LF S  KYEDA++ Y KA NCFK+AK W   G  + K +  H+KL S ++AA+A  +AANCYK ++  DA  SL QA     E+G+     R  K++ E+YE+E    +A++   R
Sbjct:    1 MADQTMRGAELEKKAEKKLSGWGLFGS--KYEDAADLYEKAANCFKLAKNWDRAGAVYIKLASCHLKLESKHEAASAYVDAANCYKKISVPDAAQSLNQAVNLFLEIGRLNMAARYCKELGELYEQEQDLGKAIDYLER 137          
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|1147611655|ref|XP_020109816.1| (alpha-soluble NSF attachment protein [Ananas comosus])

HSP 1 Score: 107.071 bits (266), Expect = 2.136e-25
Identity = 55/139 (39.57%), Postives = 85/139 (61.15%), Query Frame = 0
Query:    1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
            MA    RG    ++A+K L  + LF S  KYEDA++ + KAGN FK+AK W   G  + K +  H+KL S ++AA+A  +AANCYK ++P+DA  +L QA     E+G+     R  K++ E+Y++E   ++A++ Y R
Sbjct:    1 MADHEARGDDFEKKAEKKLTGWGLFGS--KYEDAADLFDKAGNSFKLAKNWERAGAVYIKLANCHLKLESKHEAASAYVDAANCYKKISPKDAAQALNQAVNLFLEIGRLNMAARYCKELGELYQQEQDLEKAIDFYER 137          
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|1204931935|ref|XP_021299224.1| (alpha-soluble NSF attachment protein 2 [Herrania umbratica])

HSP 1 Score: 107.071 bits (266), Expect = 2.252e-25
Identity = 54/139 (38.85%), Postives = 88/139 (63.31%), Query Frame = 0
Query:    1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
            M  Q  RG+   ++A+K L  + LF S  KYEDA++ + KA NCFK+AK+W + G  + K +  H+K+ S ++AA A  +AA+CYK    ++AIS L+QA     ++G+     R +K+IAE+YE E + ++A++ Y +
Sbjct:    1 MGDQLARGEDFEKKAEKKLNSWGLFGS--KYEDAADLFDKAANCFKLAKSWDKAGSTYVKLANCHLKVESKHEAAQAYVDAAHCYKKTATKEAISCLQQAVNMFCDIGRLSMAARYYKEIAELYESEQNIEQAIDYYEK 137          
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|971509849|dbj|GAQ88357.1| (alpha-soluble NSF attachment protein [Klebsormidium nitens])

HSP 1 Score: 107.071 bits (266), Expect = 2.599e-25
Identity = 57/141 (40.43%), Postives = 83/141 (58.87%), Query Frame = 0
Query:    7 RGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPRVCGPVCGE 147
            +G    ++ADK LK F+LF SS KYED +E   KA N +K+ KAW + G  +   SE+H KL S ++AA+A  +AAN Y+ VN   A+  ++ A    T +G+     +  KDIAEIYEKE + ++A+  Y +      GE
Sbjct:    7 KGDEFAKKADKKLKSFSLFGSSSKYEDGAELLDKAANQYKLGKAWEKAGETYVHLSEVHKKLESEHEAASALVDAANAYRKVNSAKALECMQNAVGIFTNIGRLSMAAKHLKDIAEIYEKEDNAEDALTFYQQAADLYAGE 147          
The following BLAST results are available for this feature:
BLAST of EWM30136.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112790|gb|EWM30136.1|3.512e-108100.00alpha-soluble nsf attachment protein [Nannochlorop... [more]
gi|1063488560|ref|XP_007031708.2|1.751e-2640.29PREDICTED: alpha-soluble NSF attachment protein 2 ... [more]
gi|508710737|gb|EOY02634.1|1.846e-2640.29Alpha-soluble NSF attachment protein 2 [Theobroma ... [more]
gi|551541592|ref|XP_005759073.1|4.360e-2640.60hypothetical protein EMIHUDRAFT_258834, partial [E... [more]
gi|72082731|ref|XP_785670.1|4.867e-2641.83PREDICTED: alpha-soluble NSF attachment protein [S... [more]
gi|763773595|gb|KJB40718.1|5.910e-2638.85hypothetical protein B456_007G074600 [Gossypium ra... [more]
gi|743818178|ref|XP_010931145.1|1.312e-2541.01PREDICTED: alpha-soluble NSF attachment protein 2-... [more]
gi|1147611655|ref|XP_020109816.1|2.136e-2539.57alpha-soluble NSF attachment protein [Ananas comos... [more]
gi|1204931935|ref|XP_021299224.1|2.252e-2538.85alpha-soluble NSF attachment protein 2 [Herrania u... [more]
gi|971509849|dbj|GAQ88357.1|2.599e-2540.43alpha-soluble NSF attachment protein [Klebsormidiu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna534rna534Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications