EWM30136.1, cds534 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|585112790|gb|EWM30136.1| (alpha-soluble nsf attachment protein [Nannochloropsis gaditana]) HSP 1 Score: 313.153 bits (801), Expect = 3.512e-108 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPRVCGPVCGELRACR 152
MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPRVCGPVCGELRACR
Sbjct: 1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPRVCGPVCGELRACR 152
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|1063488560|ref|XP_007031708.2| (PREDICTED: alpha-soluble NSF attachment protein 2 [Theobroma cacao]) HSP 1 Score: 110.153 bits (274), Expect = 1.751e-26 Identity = 56/139 (40.29%), Postives = 88/139 (63.31%), Query Frame = 0
Query: 1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
M Q RG+ ++A+K L + LF S KYEDA++ + KA NCFK+AK+W + G + K S H+KL S ++AA A +AA+CYK ++AIS L+QA ++G+ R +K+IAE+YE E + ++A++ Y +
Sbjct: 1 MGDQLARGEDFEKKAEKKLNSWGLFGS--KYEDAADLFDKAANCFKLAKSWDKAGSTYVKLSNCHLKLESKHEAAQAYVDAAHCYKKTATKEAISCLQQAVHMFCDIGRLSMAARYYKEIAELYESEQNIEQAIDYYEK 137
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|508710737|gb|EOY02634.1| (Alpha-soluble NSF attachment protein 2 [Theobroma cacao]) HSP 1 Score: 110.153 bits (274), Expect = 1.846e-26 Identity = 56/139 (40.29%), Postives = 88/139 (63.31%), Query Frame = 0
Query: 1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
M Q RG+ ++A+K L + LF S KYEDA++ + KA NCFK+AK+W + G + K S H+KL S ++AA A +AA+CYK ++AIS L+QA ++G+ R +K+IAE+YE E + ++A++ Y +
Sbjct: 1 MGDQLARGEDFEKKAEKKLNSWGLFGS--KYEDAADLFDKAANCFKLAKSWDKAGSTYVKLSNCHLKLESKHEAAQAYVDAAHCYKKTATKEAISCLQQAVNMFCDIGRLSMAARYYKEIAELYESEQNIEQAIDYYEK 137
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|551541592|ref|XP_005759073.1| (hypothetical protein EMIHUDRAFT_258834, partial [Emiliania huxleyi CCMP1516] >gi|485607016|gb|EOD06644.1| hypothetical protein EMIHUDRAFT_258834, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 105.531 bits (262), Expect = 4.360e-26 Identity = 54/133 (40.60%), Postives = 84/133 (63.16%), Query Frame = 0
Query: 3 SQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVE 135
SQ D+ +A +E+A+K L ++LF KYEDA+E YTKA N FKV+K W + G F K ++ +K S ++AA A +AANCYK + + A + ++A +LG+F ++ K+IAE++E EG+ A+E
Sbjct: 2 SQGDKARALVEKAEKKLASWSLFGGGSKYEDAAEMYTKAANLFKVSKCWNDAGACFEKTAQCALKSDSPHEAATAHTDAANCYKKTDAKGAPPTYKEAIGIHIDLGRFPTAAKLQKEIAELHEGEGNLPLAME 134
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|72082731|ref|XP_785670.1| (PREDICTED: alpha-soluble NSF attachment protein [Strongylocentrotus purpuratus]) HSP 1 Score: 108.997 bits (271), Expect = 4.867e-26 Identity = 64/153 (41.83%), Postives = 89/153 (58.17%), Query Frame = 0
Query: 1 MASQRDRGKAHMEEADKALKRF-----ALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEG-SYDEAVENYPRVCGPVCGE 147
MA +GK M +ADK LK ++F QK E+A E Y +A N FK+AK W E G AF +A+ + + L S ++AA + +A +CYK V+P+ AISSL+QA T+ GKF + + IAEIYE E D+A+ENY + GE
Sbjct: 1 MADNEVKGKQFMADADKKLKSSQGFFGSMFGGPQKQEEACELYQRAANMFKMAKKWQEAGDAFCRAATVSISLDSKHEAATSYVDAGSCYKKVDPKKAISSLQQAIEIYTDKGKFTMAAKHYISIAEIYENELIELDKAIENYEKAADFYKGE 153
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|763773595|gb|KJB40718.1| (hypothetical protein B456_007G074600 [Gossypium raimondii]) HSP 1 Score: 107.071 bits (266), Expect = 5.910e-26 Identity = 54/139 (38.85%), Postives = 87/139 (62.59%), Query Frame = 0
Query: 1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
M Q RG+ + A+K L ++ F S KYEDA++ + KA N FK+AK+W G + K + H+KL ST++AA A AA+CYK + ++AIS L+QA ++G+ R +K+IAE+YE E + ++A+++Y +
Sbjct: 1 MGDQSTRGEEFEKNAEKKLNSWSFFGS--KYEDAADLFDKAANFFKLAKSWDRAGSIYVKLANCHLKLESTHEAAQAFVSAAHCYKKTSTKEAISCLQQAVNMFCDIGRLSMAARYYKEIAELYESEQNIEQAIDHYEK 137
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|743818178|ref|XP_010931145.1| (PREDICTED: alpha-soluble NSF attachment protein 2-like [Elaeis guineensis]) HSP 1 Score: 105.145 bits (261), Expect = 1.312e-25 Identity = 57/139 (41.01%), Postives = 82/139 (58.99%), Query Frame = 0
Query: 1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
MA Q RG ++A+K L + LF S KYEDA++ Y KA NCFK+AK W G + K + H+KL S ++AA+A +AANCYK ++ DA SL QA E+G+ R K++ E+YE+E +A++ R
Sbjct: 1 MADQTMRGAELEKKAEKKLSGWGLFGS--KYEDAADLYEKAANCFKLAKNWDRAGAVYIKLASCHLKLESKHEAASAYVDAANCYKKISVPDAAQSLNQAVNLFLEIGRLNMAARYCKELGELYEQEQDLGKAIDYLER 137
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|1147611655|ref|XP_020109816.1| (alpha-soluble NSF attachment protein [Ananas comosus]) HSP 1 Score: 107.071 bits (266), Expect = 2.136e-25 Identity = 55/139 (39.57%), Postives = 85/139 (61.15%), Query Frame = 0
Query: 1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
MA RG ++A+K L + LF S KYEDA++ + KAGN FK+AK W G + K + H+KL S ++AA+A +AANCYK ++P+DA +L QA E+G+ R K++ E+Y++E ++A++ Y R
Sbjct: 1 MADHEARGDDFEKKAEKKLTGWGLFGS--KYEDAADLFDKAGNSFKLAKNWERAGAVYIKLANCHLKLESKHEAASAYVDAANCYKKISPKDAAQALNQAVNLFLEIGRLNMAARYCKELGELYQQEQDLEKAIDFYER 137
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|1204931935|ref|XP_021299224.1| (alpha-soluble NSF attachment protein 2 [Herrania umbratica]) HSP 1 Score: 107.071 bits (266), Expect = 2.252e-25 Identity = 54/139 (38.85%), Postives = 88/139 (63.31%), Query Frame = 0
Query: 1 MASQRDRGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPR 139
M Q RG+ ++A+K L + LF S KYEDA++ + KA NCFK+AK+W + G + K + H+K+ S ++AA A +AA+CYK ++AIS L+QA ++G+ R +K+IAE+YE E + ++A++ Y +
Sbjct: 1 MGDQLARGEDFEKKAEKKLNSWGLFGS--KYEDAADLFDKAANCFKLAKSWDKAGSTYVKLANCHLKVESKHEAAQAYVDAAHCYKKTATKEAISCLQQAVNMFCDIGRLSMAARYYKEIAELYESEQNIEQAIDYYEK 137
BLAST of EWM30136.1 vs. NCBI_GenBank
Match: gi|971509849|dbj|GAQ88357.1| (alpha-soluble NSF attachment protein [Klebsormidium nitens]) HSP 1 Score: 107.071 bits (266), Expect = 2.599e-25 Identity = 57/141 (40.43%), Postives = 83/141 (58.87%), Query Frame = 0
Query: 7 RGKAHMEEADKALKRFALFSSSQKYEDASEAYTKAGNCFKVAKAWAEGGGAFTKASELHVKLGSTYDAANAAQEAANCYKNVNPEDAISSLRQAAAFLTELGKFKQIGRIHKDIAEIYEKEGSYDEAVENYPRVCGPVCGE 147
+G ++ADK LK F+LF SS KYED +E KA N +K+ KAW + G + SE+H KL S ++AA+A +AAN Y+ VN A+ ++ A T +G+ + KDIAEIYEKE + ++A+ Y + GE
Sbjct: 7 KGDEFAKKADKKLKSFSLFGSSSKYEDGAELLDKAANQYKLGKAWEKAGETYVHLSEVHKKLESEHEAASALVDAANAYRKVNSAKALECMQNAVGIFTNIGRLSMAAKHLKDIAEIYEKEDNAEDALTFYQQAADLYAGE 147 The following BLAST results are available for this feature:
BLAST of EWM30136.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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