EWM25336.1, cds5336 (CDS) Nannochloropsis gaditana

Overview
NameEWM25336.1
Unique Namecds5336
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:775941..777506 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25336.1
Product2-oxoisovalerate dehydrogenase alpha mitochondrial expressed
Orig transcript idgnl|cribi|Naga_100196g5.3060.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:775941..777506 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016624oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Vocabulary: INTERPRO
TermDefinition
IPR001017DH_E1
IPR029061THDP-binding
Homology
BLAST of EWM25336.1 vs. NCBI_GenBank
Match: gi|585107095|gb|EWM25336.1| (2-oxoisovalerate dehydrogenase alpha mitochondrial expressed [Nannochloropsis gaditana])

HSP 1 Score: 1079.7 bits (2791), Expect = 0.000e+0
Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 0
Query:    1 MYCRPLRYILSQHAFAIQSQRGLRRLNLSAAGMQHGHRGSRPGCGRRLLSLQPTPNPPQSRSTAEAVPADDPGSIELSSTVPSEHEGEGFDGTASQRTASSAAPPQSCVLPPTEASHGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPDLDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEGTGKGH 521
            MYCRPLRYILSQHAFAIQSQRGLRRLNLSAAGMQHGHRGSRPGCGRRLLSLQPTPNPPQSRSTAEAVPADDPGSIELSSTVPSEHEGEGFDGTASQRTASSAAPPQSCVLPPTEASHGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPDLDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEGTGKGH
Sbjct:    1 MYCRPLRYILSQHAFAIQSQRGLRRLNLSAAGMQHGHRGSRPGCGRRLLSLQPTPNPPQSRSTAEAVPADDPGSIELSSTVPSEHEGEGFDGTASQRTASSAAPPQSCVLPPTEASHGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPDLDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEGTGKGH 521          
BLAST of EWM25336.1 vs. NCBI_GenBank
Match: gi|553182724|ref|XP_005853773.1| (2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Nannochloropsis gaditana CCMP526] >gi|553187337|ref|XP_005854588.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Nannochloropsis gaditana CCMP526] >gi|422294469|gb|EKU21769.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Nannochloropsis gaditana CCMP526] >gi|422295284|gb|EKU22583.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1010.36 bits (2611), Expect = 0.000e+0
Identity = 487/489 (99.59%), Postives = 488/489 (99.80%), Query Frame = 0
Query:   33 MQHGHRGSRPGCGRRLLSLQPTPNPPQSRSTAEAVPADDPGSIELSSTVPSEHEGEGFDGTASQRTASSAAPPQSCVLPPTEASHGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPDLDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEGTGKGH 521
            MQHGHRGSRPGCGRRLLSLQPTPNPPQSRSTAEAVPADD GSIELSSTVPSEHEGEGFDGTASQRTASSAAPPQSCVLPPTEASHGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPDLDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEA+TYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEGTGKGH
Sbjct:    1 MQHGHRGSRPGCGRRLLSLQPTPNPPQSRSTAEAVPADDSGSIELSSTVPSEHEGEGFDGTASQRTASSAAPPQSCVLPPTEASHGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPDLDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAMTYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEGTGKGH 489          
BLAST of EWM25336.1 vs. NCBI_GenBank
Match: gi|669137012|ref|XP_008604074.1| (2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Saprolegnia diclina VS20] >gi|530744409|gb|EQC42651.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Saprolegnia diclina VS20])

HSP 1 Score: 504.597 bits (1298), Expect = 1.609e-173
Identity = 235/401 (58.60%), Postives = 302/401 (75.31%), Query Frame = 0
Query:  117 HGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPD-LDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEG 516
            HG+FPG   + +P+ + +HVV P++  V P YRVL+  G++  GA +P+ +D+ +   +Y  M+RL +MD +FY+AQRQGRISFY+T  GEE T  GSAAA++P D V AQYRE GVLMWRGFTLDQFADQ FSN  DLGKGRQMP+HYG+  L++QT+SSPLATQ+P A GAAYG KL      A++ R  +C+FGEGAASEGDFHAALN AAT   PVL+F RNNGYAISTPVK+QFRGDG+ SR  GYG+  +RVDGNDV AVY A + ARE+ + EG+PVL+E ++YR GHHSTSDDSTRYR++SEIK W     P+ R + ++  +GWWS+E +V L+D ER +VL AL +AE K  P ++ +FEDVY EKP HL++QEA + +H+ KYP+ Y  G
Sbjct:   26 HGEFPGG--QTVPYVNKIHVVDPKDADVIPAYRVLDQQGKLVQGASIPEGIDEDLAVEIYKHMIRLNSMDNVFYDAQRQGRISFYMTAFGEEGTLFGSAAAIKPRDMVFAQYREAGVLMWRGFTLDQFADQLFSNEGDLGKGRQMPVHYGSRELNYQTVSSPLATQLPQAAGAAYGFKL------AKEDRIAVCYFGEGAASEGDFHAALNIAATRDCPVLYFARNNGYAISTPVKDQFRGDGIASRGAGYGIPVIRVDGNDVFAVYEATKKAREMILSEGRPVLLETMSYRQGHHSTSDDSTRYRAVSEIKHWKDTNCPMNRLKLYLLDQGWWSEERDVALKDAERSSVLAALTKAEAKGIPALDTMFEDVYAEKPRHLQDQEAEMLEHIAKYPEHYASG 418          
BLAST of EWM25336.1 vs. NCBI_GenBank
Match: gi|813198540|ref|XP_012208853.1| (hypothetical protein SPRG_14335 [Saprolegnia parasitica CBS 223.65] >gi|641526065|gb|KDO20463.1| hypothetical protein SPRG_14335 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 503.056 bits (1294), Expect = 7.411e-173
Identity = 235/405 (58.02%), Postives = 303/405 (74.81%), Query Frame = 0
Query:  113 TEASHGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPD-LDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEG 516
            T   HG+FPG   + +P+ + +HVV P++  V P YRVL+  G++  GA +P+ +D+ +   +Y  M+RL +MD +FY+AQRQGRISFY+T  GEE T  GSAAA++P D V AQYRE GVLMWRGFTLDQFADQ FSN  DLGKGRQMP+HYG+  L++QT+SSPLATQ+P A GAAYG KL      A++ R  +C+FGEGAASEGDFHAALN AAT   PVL+F RNNGYAISTPVK+QFRGDG+ SR  GYG+  +RVDGNDV AVY A + ARE+ + +G+PVL+E ++YR GHHSTSDDSTRYR++SEIK W     P+ R + ++  +GWWS+E +V L+D ER +VL AL +AE K  P ++ +FEDVY EKP HL++QEA + +H+ KYP+ Y  G
Sbjct:   22 TTVGHGEFPGG--QTVPYVNKIHVVDPKDADVIPAYRVLDQQGKLVPGASLPEGIDEDLAVEIYKHMIRLNSMDNVFYDAQRQGRISFYMTAFGEEGTLFGSAAAIKPRDMVFAQYREAGVLMWRGFTLDQFADQLFSNEGDLGKGRQMPVHYGSRELNYQTVSSPLATQLPQAAGAAYGFKL------AKEDRIAVCYFGEGAASEGDFHAALNIAATRDCPVLYFARNNGYAISTPVKDQFRGDGIASRGAGYGIPVIRVDGNDVFAVYEATKKAREMILSDGRPVLLETMSYRQGHHSTSDDSTRYRAVSEIKHWKDTNCPMNRLKLYLLDQGWWSEERDVALKDAERSSVLAALTKAEAKGIPALDTMFEDVYAEKPRHLQDQEAEMLEHIAKYPEHYASG 418          
BLAST of EWM25336.1 vs. NCBI_GenBank
Match: gi|1173930450|gb|OQR83290.1| (2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Achlya hypogyna])

HSP 1 Score: 502.671 bits (1293), Expect = 1.017e-172
Identity = 242/420 (57.62%), Postives = 303/420 (72.14%), Query Frame = 0
Query:   99 ASSAAP-PQSCVLPPTEASHGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPD-LDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEG 516
            A S AP  +   L  T    G+FPG   + +P+ + +HVV P+E  V P YRV++  G++  GA +P+ +D+ +   MY  M+RL +MD +FY+AQRQGRISFY+T  GEE T  GSAAA++P D V AQYRE GVLMWRGFTLDQFADQ FSN  DLGKGRQMP+HYG+  L++QT+SSPLATQ+P A GAAYG KL      A++ R  IC+FGEGAASEGDFHAALN AAT   PVL+F RNNGYAISTPVK+QFRGDG+ SR  GYG+  +RVDGNDV AVY   + ARE+ + EG+PVL+E ++YR GHHSTSDDSTRYR +SEIK W     P+ R + +M  +GWWS+E ++ L+D ER  VL AL +AE K  P +  +FEDVY EKP HL+EQE  + +HV KYP+ Y  G
Sbjct:    7 AKSVAPRARVARLFSTTVGQGEFPGG--QTVPYVNKIHVVDPKEKDVIPAYRVMDQQGKIVPGAELPEGIDEDLAVEMYKHMIRLNSMDNVFYDAQRQGRISFYMTAFGEEGTLFGSAAAIKPRDMVFAQYREAGVLMWRGFTLDQFADQLFSNEGDLGKGRQMPVHYGSRELNYQTVSSPLATQLPQAAGAAYGFKL------AKEDRIAICYFGEGAASEGDFHAALNIAATRDCPVLYFARNNGYAISTPVKDQFRGDGIASRGAGYGIPVIRVDGNDVFAVYEVTKKAREMILTEGRPVLIETMSYRQGHHSTSDDSTRYREVSEIKHWKDTNCPMNRLKLFMLERGWWSEERDLALKDVERSNVLAALTKAEAKAIPALHTMFEDVYAEKPRHLQEQENEMLEHVAKYPEHYASG 418          
BLAST of EWM25336.1 vs. NCBI_GenBank
Match: gi|673033194|ref|XP_008870558.1| (hypothetical protein H310_07057 [Aphanomyces invadans] >gi|574473420|gb|ETW00423.1| hypothetical protein H310_07057 [Aphanomyces invadans])

HSP 1 Score: 496.893 bits (1278), Expect = 2.971e-170
Identity = 239/412 (58.01%), Postives = 299/412 (72.57%), Query Frame = 0
Query:  103 APPQSCVLPPTEASHGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPD-LDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVY 513
            AP  S     T    G+FPG   + +P+ +++ VV P+E  V P YR+L+  G++  G  VP+ L + VV  +Y  M+RL  MD +FY+AQRQGRISFY+T  GEE T  GSAAA++P D V AQYRE GVLM+RGFTLDQFADQ FSN  DLGKGRQMP+HYG+  L++QT+SSPLATQ+P A GAAYG K+      A++ R  IC+FGEGAASEGDFHAALNFAAT   PVL+F RNNGYAISTPVK+QFRGDG+ SR  GYG+  +RVDGND+ AVY   + ARE+ +  G+PVLVEA++YR GHHSTSDDSTRYR +SEIK W     P+ R + +M  +GWWS+E +  L+D ER  VL+AL +AE K  P M+ +F+DVY EKP H++EQE  + DHV KYPD Y
Sbjct:   23 APSASSKHMSTVVGSGEFPGG--QTVPYVNTIAVVDPKEKDVIPAYRILDQQGKLVPGGQVPEGLTEEVVVDLYKGMIRLNQMDNVFYDAQRQGRISFYMTAFGEEGTLFGSAAAIKPRDMVFAQYREAGVLMYRGFTLDQFADQLFSNEGDLGKGRQMPVHYGSKELNYQTVSSPLATQLPQAAGAAYGFKV------AKEDRIAICYFGEGAASEGDFHAALNFAATRDCPVLYFARNNGYAISTPVKDQFRGDGIASRGAGYGIPVIRVDGNDLFAVYEVTKKARELIMTGGRPVLVEAMSYRQGHHSTSDDSTRYREVSEIKYWKDTNCPINRLKLYMLDQGWWSEERDQALKDAERTNVLQALAKAEAKGIPEMQTMFDDVYHEKPRHIQEQEQEMLDHVAKYPDHY 426          
BLAST of EWM25336.1 vs. NCBI_GenBank
Match: gi|698818007|ref|XP_009842032.1| (hypothetical protein H257_15577 [Aphanomyces astaci] >gi|574102860|gb|ETV68406.1| hypothetical protein H257_15577 [Aphanomyces astaci])

HSP 1 Score: 494.967 bits (1273), Expect = 1.835e-169
Identity = 236/426 (55.40%), Postives = 307/426 (72.07%), Query Frame = 0
Query:  100 SSAAPPQSCVLPPTEASH--------GDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPD-LDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEG 516
            S+ A  Q   L PT AS         G+FPG   + +P+ + + V+ P+E  + P YR+L+  G++ +G  VP+ L++ V+  +Y  MVRL  MD +FY+AQRQGRISFY+T  GEE T  GSAAA++P D V AQYRE GVLM+RGFTLDQFADQ FSN  DLGKGRQMP+HYG+  L++QT+SSPLATQ+P A GAAYG K+      A++ R  IC+FGEGAASEGDFHAALNFAAT   PVL+F RNNGYAISTPVK+QFRGDG+ SR  GYG+  +RVDGND+ AVY   + ARE+ +  G+PVL+EA++YR GHHSTSDDSTRYR +SEIK W     P+ R + +M  +GWWS+E +  L+D ER+ VL++L +AE K  P ++ +F+DVY EKP H++EQE  + +H+ KYP+ Y  G
Sbjct:   12 SAMARSQRRFLAPTTASKHMSTVVGTGEFPGG--QTVPYVNKITVLDPKEQDIIPAYRILDQQGKLVTGGQVPEGLNEEVIVDLYKNMVRLNQMDNVFYDAQRQGRISFYMTAFGEEGTLFGSAAAIKPRDMVFAQYREAGVLMYRGFTLDQFADQLFSNEGDLGKGRQMPVHYGSKELNYQTVSSPLATQLPQAAGAAYGFKV------AKEDRIAICYFGEGAASEGDFHAALNFAATRDCPVLYFARNNGYAISTPVKDQFRGDGIASRGAGYGIPVIRVDGNDLFAVYEVTKKAREMILTGGRPVLIEAMSYRQGHHSTSDDSTRYREVSEIKFWKDTNCPINRLKLYMLDQGWWSEERDQALKDAERINVLQSLAKAEAKGIPEIQTMFDDVYFEKPRHIQEQEKEMLEHLAKYPEHYSSG 429          
BLAST of EWM25336.1 vs. NCBI_GenBank
Match: gi|1173958219|gb|OQS04614.1| (2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Thraustotheca clavata])

HSP 1 Score: 493.812 bits (1270), Expect = 3.556e-169
Identity = 230/413 (55.69%), Postives = 301/413 (72.88%), Query Frame = 0
Query:  105 PQSCVLPPTEASHGDFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPD-LDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEG 516
            P++  L  T    G+FPG   + +P+ + +HV+ P+++ + P YRV++  G++  GA +P+ +D+ +   MY  M+RL +MD +FY+AQRQGRISFY+T  GEE T  GSAAA++P D V AQYRE GVLMWRGFTLDQFA+Q FSN  DLGKGRQMP+HYG+  L++QT+SSPLATQ+P A GAAYG KL      A++ R  IC+FGEGAASEGDFHAALN AAT + PVL+F RNNGYAISTPVK+QFRGDG+ SR  GYG+  +RVDGND+ AVY   + ARE+ + EG+PVL+E ++YR GHHSTSDDSTRYR +SEIK W     P+ R + +M  KGWW++E ++ L+D ER  VL AL +AE +  P +  +FEDVY EK  +L EQE  +  H+ KYP+ Y+ G
Sbjct:   15 PRTARLFSTTVGQGEFPGG--QTVPYVNKIHVLDPKDNEIIPAYRVMDQQGKIVPGASLPEGIDEELTVEMYKHMIRLNSMDNVFYDAQRQGRISFYMTAFGEEGTLFGSAAAIKPRDMVFAQYREAGVLMWRGFTLDQFANQLFSNEGDLGKGRQMPVHYGSRELNYQTVSSPLATQLPQAAGAAYGFKL------AKEDRIAICYFGEGAASEGDFHAALNIAATRECPVLYFARNNGYAISTPVKDQFRGDGIASRGAGYGIPVIRVDGNDIFAVYEVTKKAREMILSEGRPVLIETMSYRQGHHSTSDDSTRYREVSEIKHWKDTNCPMNRLKLFMMDKGWWTEERDIALKDIERTNVLTALTKAEARGIPELHTMFEDVYAEKTPNLIEQEQEMLQHIAKYPEHYEGG 419          
BLAST of EWM25336.1 vs. NCBI_GenBank
Match: gi|302769676|ref|XP_002968257.1| (hypothetical protein SELMODRAFT_169956 [Selaginella moellendorffii] >gi|300163901|gb|EFJ30511.1| hypothetical protein SELMODRAFT_169956 [Selaginella moellendorffii])

HSP 1 Score: 477.633 bits (1228), Expect = 2.750e-163
Identity = 229/392 (58.42%), Postives = 281/392 (71.68%), Query Frame = 0
Query:  119 DFPGAPPEGIPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPDLDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYP 510
            DFPGA      FTS +  ++P      P +R+L+  GR   G+ +P++D ++  +MYHTMVRLQ  D+IFY AQRQGRISFY+T  GEEA +V SAAAL  +D V  QYRE GVLMWRGFTLD+FA+QCFSN    GKGRQMPIHYG+  L++ TISSP+ATQ+PHAVGAAYG+K++          C + +FG+G +SEGDFHAA NFAA L+APVLF CRNNGYAISTP  EQ++GDG+V R  GYGM ++RVDGND LAV+ A  AAR++ V + KPVL+EA+TYRVGHHSTSDDST+YRS  EI  W    DP+ RFR W+E   WWS EDE +LR   R  V+ A+ +AE K KP +  LF DVY   P +L EQEA LRD V K P
Sbjct:    3 DFPGAKA---AFTSRMEFISPNAAEAVPCFRILDDLGRALDGSDIPEVDSSLAVKMYHTMVRLQTFDSIFYEAQRQGRISFYLTNIGEEALNVASAAALTKDDVVFPQYREHGVLMWRGFTLDEFANQCFSNEAGHGKGRQMPIHYGSEKLNYFTISSPIATQLPHAVGAAYGLKMD------RKNACAVTYFGDGGSSEGDFHAACNFAAVLEAPVLFVCRNNGYAISTPACEQYKGDGIVVRGRGYGMTSIRVDGNDALAVFKAVSAARKLAVEQSKPVLIEAMTYRVGHHSTSDDSTKYRSGEEIAHWRSVRDPVLRFRRWLESNAWWSVEDEKELRGAARKEVISAMNQAEKKNKPPLSELFTDVYDTLPRNLLEQEATLRDTVSKNP 385          
BLAST of EWM25336.1 vs. NCBI_GenBank
Match: gi|299473224|emb|CBN78800.1| (similar to 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Ectocarpus siliculosus])

HSP 1 Score: 476.478 bits (1225), Expect = 5.150e-162
Identity = 230/391 (58.82%), Postives = 281/391 (71.87%), Query Frame = 0
Query:  128 IPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPDLDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQTISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAITYRVGHHSTSDDSTRYRSLSEIKQWHGQEDPLRRFRAWMEGKGWWSDEDEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKEGTG 518
            +PFTS L +  P++  VWPV+RVL+ DG VR+ A+ P L +    +MY  MVRL+AMD IFYNAQRQGRISFY+   GEEA  +G AAAL   D    QYRE G+LMWR F +  FADQC SN  DLGKGRQMP+HYG+  LH+QT+SSPL TQIP AVGA Y +KL     S +D    +C+FG+GAASEGDFHAAL  AAT   PVLF CRNNGYAIST V +Q+RGDG+VSRAPGYGMHA+RVDGND LA++ A   AR VC+ + KPVL+EA+TYR+GHHSTSDD +RYRS +E+KQW     P+RRF +++EGKGWW    +  LRD ER +VL ALE AE K KP + ++FEDVY   P HL+EQ+  L  H+E+    Y    G
Sbjct:   62 MPFTSILRIEDPDKLPVWPVFRVLDDDGSVRADAVEPKLGKETALKMYGNMVRLEAMDDIFYNAQRQGRISFYLQSAGEEALQMGGAAALDMNDMAFTQYREPGLLMWRDFGVQSFADQCLSNISDLGKGRQMPVHYGSKELHYQTVSSPLGTQIPQAVGAGYALKL-----SGKDN-IAVCYFGDGAASEGDFHAALALAATRDVPVLFVCRNNGYAISTSVADQYRGDGIVSRAPGYGMHAVRVDGNDALAMFAATAEARRVCLSQKKPVLMEAMTYRLGHHSTSDDWSRYRSSNEVKQWKANHHPIRRFYSYLEGKGWWDSAKDRVLRDRERRSVLIALETAERKAKPSLGSMFEDVYEVVPPHLQEQKHQLYAHLERNAGRYDGAGG 446          
The following BLAST results are available for this feature:
BLAST of EWM25336.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107095|gb|EWM25336.1|0.000e+0100.002-oxoisovalerate dehydrogenase alpha mitochondrial... [more]
gi|553182724|ref|XP_005853773.1|0.000e+099.592-oxoisovalerate dehydrogenase E1 component, alpha... [more]
gi|669137012|ref|XP_008604074.1|1.609e-17358.602-oxoisovalerate dehydrogenase E1 component, alpha... [more]
gi|813198540|ref|XP_012208853.1|7.411e-17358.02hypothetical protein SPRG_14335 [Saprolegnia paras... [more]
gi|1173930450|gb|OQR83290.1|1.017e-17257.622-oxoisovalerate dehydrogenase alpha subunit, mito... [more]
gi|673033194|ref|XP_008870558.1|2.971e-17058.01hypothetical protein H310_07057 [Aphanomyces invad... [more]
gi|698818007|ref|XP_009842032.1|1.835e-16955.40hypothetical protein H257_15577 [Aphanomyces astac... [more]
gi|1173958219|gb|OQS04614.1|3.556e-16955.692-oxoisovalerate dehydrogenase alpha subunit, mito... [more]
gi|302769676|ref|XP_002968257.1|2.750e-16358.42hypothetical protein SELMODRAFT_169956 [Selaginell... [more]
gi|299473224|emb|CBN78800.1|5.150e-16258.82similar to 2-oxoisovalerate dehydrogenase alpha su... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5349rna5349Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications