EWM30140.1, cds533 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30140.1 vs. NCBI_GenBank
Match: gi|585112795|gb|EWM30140.1| (Protein of unknown function DUF2009, partial [Nannochloropsis gaditana]) HSP 1 Score: 199.134 bits (505), Expect = 1.054e-64 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 1 VLRPVLGGLARQKIAWTGPLLSVRLPGGLLSSLTPSLPHSLPPFHSCPTGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFDSGVGPGG 100
VLRPVLGGLARQKIAWTGPLLSVRLPGGLLSSLTPSLPHSLPPFHSCPTGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFDSGVGPGG
Sbjct: 1 VLRPVLGGLARQKIAWTGPLLSVRLPGGLLSSLTPSLPHSLPPFHSCPTGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFDSGVGPGG 100
BLAST of EWM30140.1 vs. NCBI_GenBank
Match: gi|219113269|ref|XP_002186218.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583068|gb|ACI65688.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 96.2857 bits (238), Expect = 2.947e-21 Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0
Query: 49 TGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFD 93
+G +NFYDAGSCIDGRLTSAWNWCSQL +KPFYPIFKLTGF FD
Sbjct: 430 SGANNFYDAGSCIDGRLTSAWNWCSQLPTKPFYPIFKLTGFTGFD 474
BLAST of EWM30140.1 vs. NCBI_GenBank
Match: gi|298710497|emb|CBJ25561.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 95.5153 bits (236), Expect = 6.220e-21 Identity = 37/45 (82.22%), Postives = 43/45 (95.56%), Query Frame = 0
Query: 49 TGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFD 93
+G DNF+DAGSCIDGRLTSAWNWCSQL+SKPF+P+F+LTGF SFD
Sbjct: 533 SGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTSFD 577
BLAST of EWM30140.1 vs. NCBI_GenBank
Match: gi|1043303991|gb|OBZ88725.1| (hypothetical protein A0J61_03227 [Choanephora cucurbitarum]) HSP 1 Score: 94.3597 bits (233), Expect = 1.778e-20 Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0
Query: 49 TGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFDSG 95
+G DNFYDAGSCIDGRLTSAWNWCSQ+ KP++P+F LTGFA FD G
Sbjct: 541 SGADNFYDAGSCIDGRLTSAWNWCSQIEKKPYFPVFLLTGFAGFDGG 587
BLAST of EWM30140.1 vs. NCBI_GenBank
Match: gi|551632999|ref|XP_005819361.1| (hypothetical protein GUITHDRAFT_148672 [Guillardia theta CCMP2712] >gi|428163303|gb|EKX32381.1| hypothetical protein GUITHDRAFT_148672 [Guillardia theta CCMP2712]) HSP 1 Score: 93.9745 bits (232), Expect = 2.422e-20 Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0
Query: 49 TGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFD 93
+G DNFYDAGSCIDGRLTSAW+WCS +S KPFYPIFKL GF SFD
Sbjct: 610 SGADNFYDAGSCIDGRLTSAWHWCSNISEKPFYPIFKLAGFTSFD 654
BLAST of EWM30140.1 vs. NCBI_GenBank
Match: gi|1183479414|gb|ORZ03253.1| (hypothetical protein BCR43DRAFT_431754 [Syncephalastrum racemosum]) HSP 1 Score: 92.8189 bits (229), Expect = 6.592e-20 Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0
Query: 49 TGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFDSG 95
+G DNFYDAGSCIDGRLTSAWNWCSQ+ KP++P+F LTGF FD G
Sbjct: 477 SGADNFYDAGSCIDGRLTSAWNWCSQIEQKPYFPVFLLTGFVGFDGG 523
BLAST of EWM30140.1 vs. NCBI_GenBank
Match: gi|551572686|ref|XP_005772169.1| (hypothetical protein EMIHUDRAFT_75396, partial [Emiliania huxleyi CCMP1516] >gi|485623569|gb|EOD19740.1| hypothetical protein EMIHUDRAFT_75396, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 92.4337 bits (228), Expect = 6.706e-20 Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 0
Query: 49 TGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFDSGVG 97
+GGDNF+DAGSCIDGRLTSAWNWCSQL KPFY +F L GF SFD +G
Sbjct: 412 SGGDNFFDAGSCIDGRLTSAWNWCSQLPEKPFYIVFTLAGFTSFDGSLG 460
BLAST of EWM30140.1 vs. NCBI_GenBank
Match: gi|1069959300|ref|XP_018288316.1| (hypothetical protein PHYBLDRAFT_177969 [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026585656|gb|OAD70276.1| hypothetical protein PHYBLDRAFT_177969 [Phycomyces blakesleeanus NRRL 1555(-)]) HSP 1 Score: 92.8189 bits (229), Expect = 6.910e-20 Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0
Query: 49 TGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFDSG 95
+G DNFYDAGSCIDGRLTSAWNWCSQ+ KP++P+F LTGF FD G
Sbjct: 515 SGADNFYDAGSCIDGRLTSAWNWCSQIEQKPYFPVFLLTGFVGFDGG 561
BLAST of EWM30140.1 vs. NCBI_GenBank
Match: gi|698818677|ref|XP_009842367.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574102518|gb|ETV68068.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 92.4337 bits (228), Expect = 8.922e-20 Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 0
Query: 49 TGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFDSGVG 97
+G DNF+DAGSCIDGRLTSAWNWCS+L +KPF+PIFKL GF FD G
Sbjct: 573 SGADNFFDAGSCIDGRLTSAWNWCSRLHAKPFFPIFKLAGFVGFDGKFG 621
BLAST of EWM30140.1 vs. NCBI_GenBank
Match: gi|698818675|ref|XP_009842366.1| (hypothetical protein H257_15829 [Aphanomyces astaci] >gi|574102517|gb|ETV68067.1| hypothetical protein H257_15829 [Aphanomyces astaci]) HSP 1 Score: 92.4337 bits (228), Expect = 9.009e-20 Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 0
Query: 49 TGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFDSGVG 97
+G DNF+DAGSCIDGRLTSAWNWCS+L +KPF+PIFKL GF FD G
Sbjct: 616 SGADNFFDAGSCIDGRLTSAWNWCSRLHAKPFFPIFKLAGFVGFDGKFG 664 The following BLAST results are available for this feature:
BLAST of EWM30140.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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