EWM25385.1, cds5323 (CDS) Nannochloropsis gaditana

Overview
NameEWM25385.1
Unique Namecds5323
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:746277..747776 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25385.1
Productgtp-binding protein
Orig transcript idgnl|cribi|Naga_100005g135.6679.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:746277..747776 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR030394G_HFLX_dom
IPR025121GTPase_HflX_N_dom
IPR016496GTPase_HflX
IPR027417P-loop_NTPase
IPR006073GTP_binding_domain
Homology
BLAST of EWM25385.1 vs. NCBI_GenBank
Match: gi|585107146|gb|EWM25385.1| (gtp-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 1027.31 bits (2655), Expect = 0.000e+0
Identity = 499/499 (100.00%), Postives = 499/499 (100.00%), Query Frame = 0
Query:    1 MWTLCGKCRMIKLPASLLPSTFMFAAASIEPAQLWSWQRATKPILGDNFHRNYSIRPQKVPSAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQPTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIGDRLVEGGFLQPAETRGADKKSSCEKDGKKHMCYSDEEGKQEVLSSRTENMSNKKAVNEVDV 499
            MWTLCGKCRMIKLPASLLPSTFMFAAASIEPAQLWSWQRATKPILGDNFHRNYSIRPQKVPSAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQPTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIGDRLVEGGFLQPAETRGADKKSSCEKDGKKHMCYSDEEGKQEVLSSRTENMSNKKAVNEVDV
Sbjct:    1 MWTLCGKCRMIKLPASLLPSTFMFAAASIEPAQLWSWQRATKPILGDNFHRNYSIRPQKVPSAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQPTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIGDRLVEGGFLQPAETRGADKKSSCEKDGKKHMCYSDEEGKQEVLSSRTENMSNKKAVNEVDV 499          
BLAST of EWM25385.1 vs. NCBI_GenBank
Match: gi|1086224903|emb|SDQ17689.1| (GTP-binding protein HflX [Brevundimonas sp. 374])

HSP 1 Score: 241.121 bits (614), Expect = 1.005e-70
Identity = 168/380 (44.21%), Postives = 229/380 (60.26%), Query Frame = 0
Query:   62 SAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQ---PTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIG 438
            + P+   +V+H  P R +   RL  E  L+EA  LA+ L   V   EI+RLR+  P T  G GKV EL  L+RA DA   I    LT +QQRNL++  + + V DR  +IL+IFG+RART E +LQVELA+  Y  S LVR  +   E+QRG +G+    G  +  +EL RR + ++   L+ +L+ V + R   RK R++   PT++L+GYTN GKS+L N LT S  V  +D  F TLDTT R + LP  G  A++ DTVGFI  LP ELV +FRATLEE   ADL+LHVRD   + +P  A Q   V+ +L+ + TPE     V+EVWNK+DLL ++ R+    VL  A+R A   + V VSA T EG+  L ++I 
Sbjct:    9 TVPLIRAVVIH--PDRRSDSPRLASE-RLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDALTPVQQRNLEKAWEVK-VIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVRTWT-HLERQRGGTGSTGGPGETQ--IELDRRLIADRIVRLKSELEEVRRTRALHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEARET---VLGQAERLAKDGEAVAVSAWTGEGIEPLRQIIA 373          
BLAST of EWM25385.1 vs. NCBI_GenBank
Match: gi|946727902|ref|WP_055753767.1| (GTPase HflX [Brevundimonas sp. Leaf280] >gi|944896791|gb|KQP46735.1| GTPase HflX [Brevundimonas sp. Leaf280])

HSP 1 Score: 240.736 bits (613), Expect = 1.554e-70
Identity = 168/380 (44.21%), Postives = 229/380 (60.26%), Query Frame = 0
Query:   62 SAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQ---PTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIG 438
            + P+   +V+H  P R +   RL  E  L+EA  LA+ L   V   EI+RLR+  P T  G GKV EL  L+RA DA   I    LT +QQRNL++  + + V DR  +IL+IFG+RART E +LQVELA+  Y  S LVR  +   E+QRG +G+    G  +  +EL RR + ++   L+ +L+ V + R   RK R++   PT++L+GYTN GKS+L N LT S  V  +D  F TLDTT R + LP  G  A++ DTVGFI  LP ELV +FRATLEE   ADL+LHVRD   + +P  A Q   V+ +L+ + TPE     V+EVWNK+DLL ++ R+    VL  A+R A   + V VSA T EG+  L ++I 
Sbjct:    9 TVPLIRAVVIH--PDRRSDSPRLASE-RLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDALTPVQQRNLEKAWEVK-VIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVRTWT-HLERQRGGTGSTGGPGETQ--IELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEARET---VLGQAERLAKDGEAVAVSAWTGEGIEPLRQIIA 373          
BLAST of EWM25385.1 vs. NCBI_GenBank
Match: gi|746184897|ref|WP_039243657.1| (GTPase HflX [Brevundimonas nasdae] >gi|742750342|gb|KIC61071.1| GTPase HflX [Brevundimonas nasdae])

HSP 1 Score: 240.736 bits (613), Expect = 1.604e-70
Identity = 168/380 (44.21%), Postives = 229/380 (60.26%), Query Frame = 0
Query:   62 SAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQ---PTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIG 438
            + P+   +V+H  P R +   RL  E  L+EA  LA+ L   V   EI+RLR+  P T  G GKV EL  L+RA DA   I    LT +QQRNL++  + + V DR  +IL+IFG+RART E +LQVELA+  Y  S LVR  +   E+QRG +G+    G  +  +EL RR + ++   L+ +L+ V + R   RK R++   PT++L+GYTN GKS+L N LT S  V  +D  F TLDTT R + LP  G  A++ DTVGFI  LP ELV +FRATLEE   ADL+LHVRD   + +P  A Q   V+ +L+ + TPE     V+EVWNK+DLL ++ R+    VL  A+R A   + V VSA T EG+  L ++I 
Sbjct:    9 TVPLIRAVVIH--PDRRSDSPRLASE-RLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDALTPVQQRNLEKAWEVK-VIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVRTWT-HLERQRGGTGSTGGPGETQ--IELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEARET---VLGQAERLAKDGEAVAVSAWTGEGIEPLRQIIA 373          
BLAST of EWM25385.1 vs. NCBI_GenBank
Match: gi|796983655|ref|WP_045810777.1| (GTPase HflX [Brevundimonas sp. KM4] >gi|787927016|gb|KJV41619.1| GTPase HflX [Brevundimonas sp. KM4])

HSP 1 Score: 240.736 bits (613), Expect = 1.656e-70
Identity = 168/380 (44.21%), Postives = 229/380 (60.26%), Query Frame = 0
Query:   62 SAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQ---PTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIG 438
            + P+   +V+H  P R +   RL  E  L+EA  LA+ L   V   EI+RLR+  P T  G GKV EL  L+RA DA   I    LT +QQRNL++  + + V DR  +IL+IFG+RART E +LQVELA+  Y  S LVR  +   E+QRG +G+    G  +  +EL RR + ++   L+ +L+ V + R   RK R++   PT++L+GYTN GKS+L N LT S  V  +D  F TLDTT R + LP  G  A++ DTVGFI  LP ELV +FRATLEE   ADL+LHVRD   + +P  A Q   V+ +L+ + TPE     V+EVWNK+DLL ++ R+    VL  A+R A   + V VSA T EG+  L ++I 
Sbjct:    9 TVPLIRAVVIH--PDRRSDSPRLASE-RLEEAAGLARALDLNVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDALTPVQQRNLEKAWEVK-VIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVRTWT-HLERQRGGTGSTGGPGETQ--IELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEARET---VLGQAERLAKDGEAVAVSAWTGEGIEPLRQIIA 373          
BLAST of EWM25385.1 vs. NCBI_GenBank
Match: gi|1054788048|ref|WP_066551408.1| (GTPase HflX [Brevundimonas sp. GW460-12-10-14-LB2] >gi|1025713631|gb|ANC53042.1| GTPase HflX [Brevundimonas sp. GW460-12-10-14-LB2])

HSP 1 Score: 240.35 bits (612), Expect = 2.114e-70
Identity = 168/380 (44.21%), Postives = 229/380 (60.26%), Query Frame = 0
Query:   62 SAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQ---PTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIG 438
            + P+   +V+H  P R +   RL  E  L+EA  LA+ L   V   EI+RLR+  P T  G GKV EL  L+RA DA   I    LT +QQRNL++  + + V DR  +IL+IFG+RART E +LQVELA+  Y  S LVR  +   E+QRG +G+    G  +  +EL RR + ++   L+ +L+ V + R   RK R++   PT++L+GYTN GKS+L N LT S  V  +D  F TLDTT R + LP  G  A++ DTVGFI  LP ELV +FRATLEE   ADL+LHVRD   + +P  A Q   V+ +L+ + TPE     V+EVWNK+DLL ++ R+    VL  A+R A   + V VSA T EG+  L ++I 
Sbjct:    9 TVPLIRAVVIH--PDRRSDSPRLASE-RLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDALTPVQQRNLEKAWEVK-VIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVRTWT-HLERQRGGTGSTGGPGETQ--IELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKHIETPEGKTRRVLEVWNKIDLLDDEARET---VLGQAERLAKDGEAVAVSAWTGEGIEPLRQIIA 373          
BLAST of EWM25385.1 vs. NCBI_GenBank
Match: gi|1054862673|ref|WP_066624741.1| (GTPase HflX [Brevundimonas vesicularis] >gi|1210967076|gb|ASE40890.1| GTPase HflX [Brevundimonas vesicularis])

HSP 1 Score: 240.35 bits (612), Expect = 2.253e-70
Identity = 168/380 (44.21%), Postives = 229/380 (60.26%), Query Frame = 0
Query:   62 SAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQ---PTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIG 438
            + P+   +V+H  P R +   RL  E  L+EA  LA+ L   V   EI+RLR+  P T  G GKV EL  L+RA DA   I    LT +QQRNL++  + + V DR  +IL+IFG+RART E +LQVELA+  Y  S LVR  +   E+QRG +G+    G  +  +EL RR + ++   L+ +L+ V + R   RK R++   PT++L+GYTN GKS+L N LT S  V  +D  F TLDTT R + LP  G  A++ DTVGFI  LP ELV +FRATLEE   ADL+LHVRD   + +P  A Q   V+ +L+ + TPE     V+EVWNK+DLL ++ R+    VL  A+R A   + V VSA T EG+  L ++I 
Sbjct:    9 TVPLIRAVVIH--PDRRSDSPRLASER-LEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDALTPVQQRNLEKAWEVK-VIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVRTWT-HLERQRGGTGSTGGPGETQ--IELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEARET---VLGQAERLAKDGEAVAVSAWTGEGIEPLRQIIA 373          
BLAST of EWM25385.1 vs. NCBI_GenBank
Match: gi|946882160|ref|WP_055805040.1| (GTPase HflX [Brevundimonas sp. Leaf168] >gi|945099163|gb|KQR61663.1| GTPase HflX [Brevundimonas sp. Leaf168])

HSP 1 Score: 237.654 bits (605), Expect = 2.280e-69
Identity = 167/380 (43.95%), Postives = 228/380 (60.00%), Query Frame = 0
Query:   62 SAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQ---PTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIG 438
            + P+   +V+H  P R +   RL  E  L+EA  LA+ L   V   EI+RLR+  P T  G GKV EL  L+RA DA   I    LT +QQRNL++  + + V DR  +IL+IFG+RART E +LQVELA+  Y  S LVR  +   E+QRG +G+    G  +  +EL RR + ++   L+ +L+ V + R   RK R++   PT++L+GYTN GKS+L N LT S  V  +D  F TLDTT R + LP  G  A++ DTVGFI  LP ELV +FRATLEE   ADL+LHVRD   + +P  A Q   V+ +L+ + TPE     V+EVWNK+DLL ++  +    VL  A+R A   + V VSA T EG+  L ++I 
Sbjct:    9 TVPLIRAVVIH--PDRRSDSPRLASE-RLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDALTPVQQRNLEKAWEVK-VIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVRTWT-HLERQRGGTGSTGGPGETQ--IELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEAGET---VLGQAERLAKDGEAVAVSAWTGEGIEPLRQIIA 373          
BLAST of EWM25385.1 vs. NCBI_GenBank
Match: gi|516074245|ref|WP_017504828.1| (GTPase HflX [alpha proteobacterium L41A])

HSP 1 Score: 237.269 bits (604), Expect = 2.760e-69
Identity = 167/380 (43.95%), Postives = 228/380 (60.00%), Query Frame = 0
Query:   62 SAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQ---PTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIG 438
            + P+   +V+H  P R +   RL  E  L+EA  LA+ L   V   EI+RLR+  P T  G GKV EL  L+RA DA   I    LT +QQRNL++  + + V DR  +IL+IFG+RART E +LQVELA+  Y  S LVR  +   E+QRG +G+    G  +  +EL RR + ++   L+ +L+ V + R   RK R++   PT++L+GYTN GKS+L N LT S  V  +D  F TLDTT R + LP  G  A++ DTVGFI  LP ELV +FRATLEE   ADL+LHVRD   + +P  A Q   V+ +L+ + TP      V+EVWNK+DLL ++ R+    VL  A+R A   + V VSA T EG+  L ++I 
Sbjct:    9 TVPLIRAVVIH--PDRRSDSPRLASER-LEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDALTPVQQRNLEKAWEVK-VIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVRTWT-HLERQRGGTGSTGGPGETQ--IELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPVGKTRRVLEVWNKIDLLDDEARET---VLGQAERLAKDGEAVAVSAWTGEGIEPLRQIIA 373          
BLAST of EWM25385.1 vs. NCBI_GenBank
Match: gi|1084481458|gb|OGN46397.1| (GTPase HflX [Caulobacterales bacterium GWE1_67_11])

HSP 1 Score: 236.113 bits (601), Expect = 9.652e-69
Identity = 167/380 (43.95%), Postives = 227/380 (59.74%), Query Frame = 0
Query:   62 SAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDAILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQ---PTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAKREASSPDVVLVSAQTKEGMRELVRMIG 438
            + P+   +V+H  P R +   RL  E  L+EA  LA+ L   V   EI+RLR   P T  G GKV EL  L+RA DA   I    LT +QQRNL++  + + V DR  +IL+IFG+RART E +LQVELA+  Y  S LVR  +   E+QRG +G+    G  +  +EL RR + ++   L+ +L+ V + R   RK R++   PT++L+GYTN GKS+L N LT S  V  +D  F TLDTT R + LP  G  A++ DTVGFI  LP ELV +FRATLEEA  ADL+LHVRD ++  +     Q   V+ +L+ + TPE     V+EVWNK+DLL  + R+    VL  A+R A + + V VSA T EG+  L + I 
Sbjct:    9 AVPLIRAVVIH--PDRRSDSPRLASER-LEEAVGLARALDLDVRAEEIVRLRGTTPATLFGSGKVEELAALVRAADAEAVIIDDALTPVQQRNLEKAWEVK-VIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVRTWT-HLERQRGGTGSTGGPGETQ--IELDRRLIADRIVRLKAELEEVRRTRGLHRKQRQKVPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEAGEADLILHVRDIASADSD---AQAKDVETVLKQIETPEGKTRRVLEVWNKIDLLDEEAREA---VLGQAERLAKTGEAVAVSAWTGEGIEPLRQTIA 373          
The following BLAST results are available for this feature:
BLAST of EWM25385.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107146|gb|EWM25385.1|0.000e+0100.00gtp-binding protein [Nannochloropsis gaditana][more]
gi|1086224903|emb|SDQ17689.1|1.005e-7044.21GTP-binding protein HflX [Brevundimonas sp. 374][more]
gi|946727902|ref|WP_055753767.1|1.554e-7044.21GTPase HflX [Brevundimonas sp. Leaf280] >gi|944896... [more]
gi|746184897|ref|WP_039243657.1|1.604e-7044.21GTPase HflX [Brevundimonas nasdae] >gi|742750342|g... [more]
gi|796983655|ref|WP_045810777.1|1.656e-7044.21GTPase HflX [Brevundimonas sp. KM4] >gi|787927016|... [more]
gi|1054788048|ref|WP_066551408.1|2.114e-7044.21GTPase HflX [Brevundimonas sp. GW460-12-10-14-LB2]... [more]
gi|1054862673|ref|WP_066624741.1|2.253e-7044.21GTPase HflX [Brevundimonas vesicularis] >gi|121096... [more]
gi|946882160|ref|WP_055805040.1|2.280e-6943.95GTPase HflX [Brevundimonas sp. Leaf168] >gi|945099... [more]
gi|516074245|ref|WP_017504828.1|2.760e-6943.95GTPase HflX [alpha proteobacterium L41A][more]
gi|1084481458|gb|OGN46397.1|9.652e-6943.95GTPase HflX [Caulobacterales bacterium GWE1_67_11][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5336rna5336Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications