EWM25383.1, cds5322 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25383.1 vs. NCBI_GenBank
Match: gi|585107144|gb|EWM25383.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 511.146 bits (1315), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 Query: 1 MSIRRFSTFFVVIWVLILAAITQGFFLAPCTRSATTLMQAQASKQSQNRVDGGKLDRLAALQQGAFLSSAFLFLTASLSSPAQAKNSAPAASFEECISRLLLSRKVLEPVQKYIKIGQYDPARTNIKYVTNQFRLKKAMERVVLLAFEKDLPQSKLDDAAEVTAVIDNTLSQLDSSVYTQIFIPTDGEISPDALKYQKQAFEFYDTTLDSIDKVLSLASPEDLKEAQKLVDGTSLPPFLFKSFADGQTFRPPTP 254 MSIRRFSTFFVVIWVLILAAITQGFFLAPCTRSATTLMQAQASKQSQNRVDGGKLDRLAALQQGAFLSSAFLFLTASLSSPAQAKNSAPAASFEECISRLLLSRKVLEPVQKYIKIGQYDPARTNIKYVTNQFRLKKAMERVVLLAFEKDLPQSKLDDAAEVTAVIDNTLSQLDSSVYTQIFIPTDGEISPDALKYQKQAFEFYDTTLDSIDKVLSLASPEDLKEAQKLVDGTSLPPFLFKSFADGQTFRPPTP Sbjct: 1 MSIRRFSTFFVVIWVLILAAITQGFFLAPCTRSATTLMQAQASKQSQNRVDGGKLDRLAALQQGAFLSSAFLFLTASLSSPAQAKNSAPAASFEECISRLLLSRKVLEPVQKYIKIGQYDPARTNIKYVTNQFRLKKAMERVVLLAFEKDLPQSKLDDAAEVTAVIDNTLSQLDSSVYTQIFIPTDGEISPDALKYQKQAFEFYDTTLDSIDKVLSLASPEDLKEAQKLVDGTSLPPFLFKSFADGQTFRPPTP 254
BLAST of EWM25383.1 vs. NCBI_GenBank
Match: gi|545706601|ref|XP_005705617.1| (hypothetical protein Gasu_34880 [Galdieria sulphuraria] >gi|452822074|gb|EME29097.1| hypothetical protein Gasu_34880 [Galdieria sulphuraria]) HSP 1 Score: 99.3673 bits (246), Expect = 1.384e-21 Identity = 62/167 (37.13%), Postives = 87/167 (52.10%), Query Frame = 0 Query: 62 QQGAFLSSAFLFLTASLSSPAQAKNSAPAASFEECISRLLLSRKVLEPVQKYIKIGQYDPARTNIKYVTNQFRLKKAMERVVLLAFEKDLPQSKLDDAAEVTAVIDNTLSQLDSSVYTQIFIPTDGE-ISPDALKYQKQAFEFYDTTLDSIDKVLSLASPEDLKEAQ 227 Q +L+ L +SP A N A E + ++ R++L+PV+ Y+ G +D ART++ Y T RLK M+ V L E L D A E T IDN +SQLD+S YT FIP+D ++ KYQ QA +FY + +D L L+ E+LK AQ Sbjct: 71 HQRGYLALVTLIGVYCFASPVFAYN----ADMESALVPIIQCRQLLDPVEGYLNNGNWDKARTSVNYCTRVLRLKTNMKTVTNLLSEDTLK----DKAIEYTVDIDNAMSQLDASAYTPNFIPSDARGVTDQNQKYQMQAKDFYHKVIQELDAFLDLSPGEELKNAQ 229
BLAST of EWM25383.1 vs. NCBI_GenBank
Match: gi|298706673|emb|CBJ29602.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 101.679 bits (252), Expect = 7.224e-21 Identity = 68/171 (39.77%), Postives = 94/171 (54.97%), Query Frame = 0 Query: 80 SPAQAKNSAPAA-SFEECISRLLLSRKVLEPVQKYIKIGQYDPARTNIKYVTNQFRLKKAMERVVLLAFE----KDLPQSKLDDAAEVTAVIDNTLSQLDSSVYTQIFIP--TDGEISPDALKYQKQAFEFYDTTLDSIDKVLSLASPEDLKEAQKLVDG--TSLPPFLFK 241 SPA +K + AA S EE + +++ ++V +P +Y+K Q+D ARTN Y+T F LKK ++ ++ A + D + D A EV A+ N DSSVYT IFIP DG + P A KY KQA+ FYD +D + L PE A+KL+ LP FLFK Sbjct: 90 SPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVEDPDTMEKAFDMAQEVEALFTN----FDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPSFLFK 256
BLAST of EWM25383.1 vs. NCBI_GenBank
Match: gi|873226894|emb|CEM20016.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 87.4261 bits (215), Expect = 2.136e-17 Identity = 52/162 (32.10%), Postives = 85/162 (52.47%), Query Frame = 0 Query: 79 SSPAQAKNSAPAASFEECISRLLLSRKVLEPVQKYIKIGQYDPARTNIKYVTNQFRLKKAMERVVLLAFEKDLPQSKLDDAAEVTAVIDNTLSQLDSSVYTQIF-IPTDGEISPDALKYQKQAFEFYDTTLDSIDKVLSLASPEDLKEAQKLVDGTSLPPFL 239 PA +S+ + E I+ + + R+ ++PV+ YI GQ+D AR+N+ Y T RL +++V D+ + + E+ + NT+S LDSS+YT IF T KYQK+ + +YD ++ +D+ + L E L E+ +L D LP FL Sbjct: 39 GGPAWG-DSSGLGNTTEAIATVFVCRRAMDPVKGYIAEGQWDRARSNVNYCTRVLRLNSVLKKV-----SNDIDEV---EGLEIAGDLLNTMSDLDSSIYTPIFAFDTASGTQRSFAKYQKECYRYYDESVALLDRFIQLLPSELLAESSQLADARPLPKFL 191
BLAST of EWM25383.1 vs. NCBI_GenBank
Match: gi|544210019|ref|XP_005535411.1| (hypothetical protein CYME_CMD034C [Cyanidioschyzon merolae strain 10D] >gi|449015723|dbj|BAM79125.1| hypothetical protein CYME_CMD034C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 85.5001 bits (210), Expect = 2.450e-16 Identity = 59/184 (32.07%), Postives = 95/184 (51.63%), Query Frame = 0 Query: 49 RVDGGKLDRLAALQQGAFLSSAFLFLTAS---LSSPAQAKNSAPAAS------FEECISRLLLSRKVLEPVQKYIKIGQYDPARTNIKYVTNQFRLKKAMERVV--LLAFEKDLPQSKLDDAAEVTAVIDNTLSQLDSSVYTQIFIPTDGEISPDALKYQKQAFEFYDTTLDSIDKVLSLASPE 221 R+ G L AA Q + LS A L AS L+ P + S A+ + + +++ R++LEP+ +Y++ G +D AR+N+ Y T RL A+ V LL E DL K + A V++ + N ++QLD+++YT IF+ +D +SP KY +A + + +D LSL E Sbjct: 36 RLSGEGLGSGAARQAFSGLSRALAGLLASVWLLADPTVTQRSLAFAANPYDLGTDRGVQAVMVCRELLEPIPRYVESGSWDKARSNVNYCTRTLRLHTALRAVTDRLLTPEYDL--EKHESAMRVSSDLPNVMTQLDATLYTPIFMASDQGVSPAQRKYGDEALGYLEQAKQMLDHYLSLLPSE 217
BLAST of EWM25383.1 vs. NCBI_GenBank
Match: gi|1189381435|gb|OSX69233.1| (hypothetical protein BU14_1714s0002 [Porphyra umbilicalis]) HSP 1 Score: 81.6481 bits (200), Expect = 5.683e-15 Identity = 51/146 (34.93%), Postives = 77/146 (52.74%), Query Frame = 0 Query: 92 SFEECISRLLLSRKVLEPVQKYIKIGQYDPARTNIKYVTNQFRLKKAMERVVLLAFEKDLPQSKLDDAAEVTAVIDNTLSQLDSSVYTQIFIPTD-GEISPDALKYQKQAFEFYDTTLDSIDKVLSLASPEDLKEAQKLVDGTSLP 236 S +E ++ L+ R L P++ Y+K G++D ARTN+ Y T RL + R A D DA +V + + N +QLD+S YT FIP D GEI +A KY +Q F D +D++L+LA +++ + SLP Sbjct: 89 SLDEPLTSLVQCRAALPPIRGYLKAGKWDKARTNVNYCTRVLRLSTNI-RTYATALGGD----AYYDALDVLSDVMNLTTQLDASAYTAGFIPADEGEIPLEAKKYMEQGLAFLDEVEGLMDQLLALAG-SNVERVKPAAKAMSLP 228 The following BLAST results are available for this feature:
BLAST of EWM25383.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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