EWM25434.1, cds5305 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25434.1 vs. NCBI_GenBank
Match: gi|585107195|gb|EWM25434.1| (cell cycle related kinase [Nannochloropsis gaditana]) HSP 1 Score: 766.148 bits (1977), Expect = 0.000e+0 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
Query: 1 MPGVLMPADGLAGEFVGTKGETYQRPVISRGRPTSRFDQLGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSASEIEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEHPGNFAVVTRKLPLSVTSILGSRFENCWKERKGDNVFEDVMKSCRLGRE 375
MPGVLMPADGLAGEFVGTKGETYQRPVISRGRPTSRFDQLGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSASEIEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEHPGNFAVVTRKLPLSVTSILGSRFENCWKERKGDNVFEDVMKSCRLGRE
Sbjct: 1 MPGVLMPADGLAGEFVGTKGETYQRPVISRGRPTSRFDQLGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSASEIEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEHPGNFAVVTRKLPLSVTSILGSRFENCWKERKGDNVFEDVMKSCRLGRE 375
BLAST of EWM25434.1 vs. NCBI_GenBank
Match: gi|553191297|ref|XP_005855357.1| (cyclin-dependent kinase d1 2, partial [Nannochloropsis gaditana CCMP526] >gi|422293703|gb|EKU21003.1| cyclin-dependent kinase d1 2, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 351.673 bits (901), Expect = 3.737e-119 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
Query: 1 MPGVLMPADGLAGEFVGTKGETYQRPVISRGRPTSRFDQLGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGV 174
MPGVLMPADGLAGEFVGTKGETYQRPVISRGRPTSRFDQLGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGV
Sbjct: 8 MPGVLMPADGLAGEFVGTKGETYQRPVISRGRPTSRFDQLGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGV 181
BLAST of EWM25434.1 vs. NCBI_GenBank
Match: gi|291244072|ref|XP_002741922.1| (PREDICTED: cyclin-dependent kinase 20-like [Saccoglossus kowalevskii]) HSP 1 Score: 260.766 bits (665), Expect = 4.291e-81 Identity = 137/304 (45.07%), Postives = 184/304 (60.53%), Query Frame = 0
Query: 36 RFDQLGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSASE---IEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEHPGNFAVVTR 336
++ LGRIGEG G V+ TG+VVA+K+V L LE +G+P ALRE++ALQ ++ QHVV+L D FP G LV E+M SDL + R E+Q+KSYM MLL+G++Y H I+HRDLKP+N+L+S G +KI D G ARV N+ YSHQV T WYRAPELL GAR+Y +D+W G I G++ SPLFPG D++Q+ VL VLGTP+ ++ PDY+KI P L Q+ P P + L ++ + KR+SA AL + +F+ EP H TR
Sbjct: 3 QYTILGRIGEGAHGIVFKAKHIETGEVVAMKKVPLRRLE-DGIPNTALREIKALQEIDESQHVVKLRDVFPHGTGFVLVFEFMLSDLSEVIRNSAKPLTEAQVKSYMQMLLKGVTYCHKNSIMHRDLKPANLLISETGHLKIADFGLARVFNNNEGRQYSHQVATRWYRAPELLYGARKYDEGVDLWAVGCIFGDLLNNSPLFPGESDIEQLCCVLRVLGTPTEKTWPGMKDLPDYKKISFPENPPIPLEQIVPDASPEALDLLKKFLVYPSKKRISAAEALLHPYFFTEPLPAHHSELPRPTR 305
BLAST of EWM25434.1 vs. NCBI_GenBank
Match: gi|593772223|ref|XP_007124448.1| (PREDICTED: cyclin-dependent kinase 20-like isoform X2 [Physeter catodon]) HSP 1 Score: 259.225 bits (661), Expect = 1.595e-80 Identity = 133/297 (44.78%), Postives = 183/297 (61.62%), Query Frame = 0
Query: 40 LGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSASEIEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEHPGNFAVVTR 336
LGRIGEG G V+ TG++VA+K+V L LE +G+P ALRE++ALQ +E Q+VV+L FP G L E+M SDL + R + ++Q+KSY+ MLL+G+++ HA I+HRDLKP+N+L+SA G +KI D G ARV + Y+HQV T WYRAPELL GAR+Y +D+W G I+GE+ SPLFPG D++Q+ VL +LGTPS EI+ PDY KI A L +V P P + L + P +R++A AL +R+F+ P HP + R
Sbjct: 7 LGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLE-DGIPSQALREIKALQEIEDSQYVVQLKSVFPHGAGFVLAFEFMLSDLAEVVRHAQRPLAQAQVKSYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCILGELLNGSPLFPGENDIEQLCCVLRILGTPSPQEIKDLPDYNKISFKEQAPVPLEEVLPDASPQALDLLGHFLLYPPRQRIAASQALLHRYFFTAPLPAHPSELPIPQR 302
BLAST of EWM25434.1 vs. NCBI_GenBank
Match: gi|957950929|gb|ALQ34032.1| (cyclin-dependent kinase 20 isoform 3, partial [Homo sapiens]) HSP 1 Score: 257.684 bits (657), Expect = 1.750e-80 Identity = 133/300 (44.33%), Postives = 186/300 (62.00%), Query Frame = 0
Query: 40 LGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSAS---EIEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEHPGNFAVVTR 336
LGRIGEG G V+ TG++VA+K+V L LE +G P ALRE++ALQ +E +Q+VV+L FP GG L E+M SDL + R + ++Q+KSY+ MLL+G+++ HA I+HRDLKP+N+L+SA G +KI D G ARV + Y+HQV T WYRAPELL GAR+Y +D+W G IMGE+ SPLFPG+ D++Q+ VL +LGTP+ E+ + PDY KI L +V P V P + L Q + P +R++A AL +++F+ P HP + R
Sbjct: 7 LGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLE-DGFPNQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVKSYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVATRWYRAPELLYGARQYDQGVDLWSVGCIMGELLNGSPLFPGKNDIEQLCYVLRILGTPNPQVWPELTELPDYNKISFKEQVPMPLEEVLPDVSPQALDLLGQFLLYPPHQRIAASKALLHQYFFTAPLPAHPSELPIPQR 305
BLAST of EWM25434.1 vs. NCBI_GenBank
Match: gi|957828983|ref|XP_014664387.1| (PREDICTED: cyclin-dependent kinase 20-like [Priapulus caudatus] >gi|957828985|ref|XP_014664388.1| PREDICTED: cyclin-dependent kinase 20-like [Priapulus caudatus] >gi|957828987|ref|XP_014664390.1| PREDICTED: cyclin-dependent kinase 20-like [Priapulus caudatus] >gi|957828989|ref|XP_014664391.1| PREDICTED: cyclin-dependent kinase 20-like [Priapulus caudatus] >gi|957828991|ref|XP_014664392.1| PREDICTED: cyclin-dependent kinase 20-like [Priapulus caudatus]) HSP 1 Score: 258.07 bits (658), Expect = 4.493e-80 Identity = 129/296 (43.58%), Postives = 182/296 (61.49%), Query Frame = 0
Query: 35 SRFDQLGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSASE---IEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEH 327
++ LGRIGEG G V+ TGK VA+K+++L +E +G+P ALRE++ALQ +E H++V+ L + FP G L ++MPSDL + R + ESQ KSYM M+L+G+ Y+H I+HRDLKP+N+L+S G++KI D G ARV ++ YSHQV T WYRAPELL GAR+Y +D+W G I GE+ +SPLFPG D++Q+ VL V GTP+ + + PDY KI L +V P PA + L + + +R+SAE AL + +F+ EP H
Sbjct: 2 DQYTILGRIGEGAHGIVFKARHIETGKTVALKKIQLKKIE-DGIPNTALREIKALQQIEDHENVISLRELFPHGMGFVLAFDFMPSDLTTLIRDTQHPLMESQAKSYMIMILKGVGYMHNHGIMHRDLKPANLLVSYTGLLKIADFGLARVFSNDSDRNYSHQVATRWYRAPELLYGARKYDEGVDLWAIGCIFGELLNISPLFPGDNDIEQLCCVLRVFGTPNEDVWPGVTELPDYNKISFQEQVPIPLQEVVPNATPAAVLLLQSFLRYPSKQRISAEQALMHFYFFTEPLPAH 296
BLAST of EWM25434.1 vs. NCBI_GenBank
Match: gi|511919261|ref|XP_004778871.1| (PREDICTED: cyclin-dependent kinase 20 isoform X1 [Mustela putorius furo]) HSP 1 Score: 258.07 bits (658), Expect = 5.996e-80 Identity = 138/301 (45.85%), Postives = 188/301 (62.46%), Query Frame = 0
Query: 40 LGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDL-EVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSAS---EIEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEHPGNFAVVTR 336
LGRIGEG G V+ TG++VA+K+V L LE +G+P ALRE++ALQ +E HQHVV+L FP G L E+M SDL EV+ +R + P +Q+KSY+ MLL+G+++ HA I+HRDLKP+N+L+SA G +KI D G ARV + Y+HQV T WYRAPELL GAR+Y +D+W G I+GE+ SPLFPG D++Q+ VL +LGTPS EI + PDY KI A L +V P P + L Q + P +R++A AL +++F+ P HP + R
Sbjct: 7 LGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLE-DGIPNQALREIKALQEIEDHQHVVQLKAVFPHGAGFVLAFEFMLSDLAEVVRHAQRPLVP-AQVKSYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCILGELLNGSPLFPGENDIEQLCCVLRILGTPSPQVWPEIMELPDYNKISFKEQAPVPLEEVLPDASPQALDLLGQFLLYPPRQRIAASQALLHQYFFTAPLPAHPSELPIPQR 305
BLAST of EWM25434.1 vs. NCBI_GenBank
Match: gi|632991889|ref|XP_007884830.1| (PREDICTED: cyclin-dependent kinase 20, partial [Callorhinchus milii]) HSP 1 Score: 257.299 bits (656), Expect = 6.331e-80 Identity = 135/304 (44.41%), Postives = 182/304 (59.87%), Query Frame = 0
Query: 36 RFDQLGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSAS---EIEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEHPGNFAVVTR 336
R+ LGR+GEG G V+ D TG VA+K+V L L+ G+P ALRE++ALQ +E +QHVV+L + FP G LV EYM SDL + R ESQ+K YM MLL+GL++ HA I+HRDLKP+N+L+S+ G +KI D G ARV ++ YSHQV T WYR+PELL GARRY +D+W G I GE+ SPLFPG D++Q+ VL VLGTP+ + EI + PDY KI L + P P + L ++ + +R+ A AL + +F+ EP H + R
Sbjct: 3 RYSLLGRVGEGAHGIVFKAKDVETGDTVALKKVALRKLD-EGIPNQALREIKALQEIEDNQHVVKLREVFPHGTGFVLVFEYMLSDLSEVIRNSDRPLTESQVKGYMMMLLKGLAFCHANSIMHRDLKPANLLISSTGHLKIADFGLARVYSNEGDRLYSHQVATRWYRSPELLYGARRYDEGVDLWAVGCIFGELLNNSPLFPGENDIEQLCCVLRVLGTPNETIWPEITELPDYNKITFKENPPIPLRHIVPDAAPEAVDLLQRFLVYPSARRIRAAQALLHPYFFTEPLPAHHSELPIPHR 305
BLAST of EWM25434.1 vs. NCBI_GenBank
Match: gi|525342789|ref|NP_001267316.1| (cyclin-dependent kinase 20 [Pan troglodytes] >gi|343960759|dbj|BAK61969.1| cell cycle-related kinase [Pan troglodytes]) HSP 1 Score: 257.684 bits (657), Expect = 7.688e-80 Identity = 133/300 (44.33%), Postives = 186/300 (62.00%), Query Frame = 0
Query: 40 LGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSAS---EIEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEHPGNFAVVTR 336
LGRIGEG G V+ TG++VA+K+V L LE +G P ALRE++ALQ +E +Q+VV+L FP GG L E+M SDL + R + ++Q+KSY+ MLL+G+++ HA I+HRDLKP+N+L+SA G +KI D G ARV + Y+HQV T WYRAPELL GAR+Y +D+W G IMGE+ SPLFPG+ D++Q+ VL +LGTP+ E+ + PDY KI L +V P V P + L Q + P +R++A AL +++F+ P HP + R
Sbjct: 7 LGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLE-DGFPNQALREIKALQEMEDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQVKSYLQMLLKGIAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDSSRLYTHQVATRWYRAPELLYGARQYDQGVDLWSVGCIMGELLNGSPLFPGKNDIEQLCYVLRILGTPNPQVWPELTELPDYNKISFKEQVPMPLEEVLPDVSPQALDLLGQFLLYPPRQRIAASKALLHQYFFTAPLPAHPSELPIPQR 305
BLAST of EWM25434.1 vs. NCBI_GenBank
Match: gi|301768471|ref|XP_002919653.1| (PREDICTED: cyclin-dependent kinase 20 [Ailuropoda melanoleuca]) HSP 1 Score: 257.299 bits (656), Expect = 9.140e-80 Identity = 135/300 (45.00%), Postives = 185/300 (61.67%), Query Frame = 0
Query: 40 LGRIGEGRFGDVYIGADRSTGKVVAIKEVRLPNLERNGLPKAALRELRALQHLEGHQHVVRLLDAFPRGGSLALVLEYMPSDLEVMFRTRRSVFPESQIKSYMWMLLQGLSYLHARRILHRDLKPSNILLSARGVIKIGDLGSARVDNDPPLEPYSHQVGTAWYRAPELLLGARRYGPAIDMWGAGVIMGEMACLSPLFPGRGDLDQIFRVLEVLGTPSAS---EIEQFPDYRKIEPPCMAKKDLSQVFPRVPPAGMCLFEQLVELDPTKRVSAETALTNRFFYIEPAIEHPGNFAVVTR 336
LGRIGEG G V+ TG++VA+K+V L LE +G+P ALRE++ALQ +E +QHVV+L FP G L E+M SDL + R + ++Q+KSY+ MLL+G+++ HA I+HRDLKP+N+L+SA G +KI D G ARV + Y+HQV T WYRAPELL GAR+Y +D+W G I+GE+ SPLFPG D++Q+ VL +LGTPS EI + PDY KI A L +V P P + L Q + P +R+SA AL +++F+ P HP + R
Sbjct: 7 LGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLE-DGIPNQALREIKALQEIEDNQHVVQLKAVFPHGAGFVLAFEFMLSDLAEVVRHAQRPLAQAQVKSYLQMLLRGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCILGELLNGSPLFPGENDIEQLCCVLRILGTPSPQVWPEITELPDYNKISFKEQAPVPLEEVLPDASPQALDLLGQFLLYPPRQRISASQALLHQYFFTAPLPAHPSELPIPQR 305 The following BLAST results are available for this feature:
BLAST of EWM25434.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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