EWM25372.1, cds5301 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25372.1 vs. NCBI_GenBank
Match: gi|585107133|gb|EWM25372.1| (serine threonine-protein phosphatase 6 regulatory [Nannochloropsis gaditana]) HSP 1 Score: 858.981 bits (2218), Expect = 0.000e+0 Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 0 Query: 1 MFMSLVSGSSLINHLSPLHSGMFAFLSQGPLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQEGVYFNAPDAGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAEPEPAAGSLAAVHNPDVIRDYSNLPPPPTASSYSAPPPPASLHGMSSSGTHLPQASKPAPKVDRPIVADGFHCSVGNPELAAKYGHIKTDIPMAPPPSASGLPARTCAGTGEGGEEGQRGPPRPAANPTQYSAFAAYGGRPPPRYVTYNANDNTSAPFIHPAGPPPPVQQPPGPPHWQQMHHQQSGGLLTHTGRNASSPPQTASPFSNESFQQAPSPAVPSGSPPSSSATSSPVPPAGYRASPLPPPPPPPHPSRHCSLPNSRPP 431 MFMSLVSGSSLINHLSPLHSGMFAFLSQGPLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQEGVYFNAPDAGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAEPEPAAGSLAAVHNPDVIRDYSNLPPPPTASSYSAPPPPASLHGMSSSGTHLPQASKPAPKVDRPIVADGFHCSVGNPELAAKYGHIKTDIPMAPPPSASGLPARTCAGTGEGGEEGQRGPPRPAANPTQYSAFAAYGGRPPPRYVTYNANDNTSAPFIHPAGPPPPVQQPPGPPHWQQMHHQQSGGLLTHTGRNASSPPQTASPFSNESFQQAPSPAVPSGSPPSSSATSSPVPPAGYRASPLPPPPPPPHPSRHCSLPNSRPP Sbjct: 1 MFMSLVSGSSLINHLSPLHSGMFAFLSQGPLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQEGVYFNAPDAGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAEPEPAAGSLAAVHNPDVIRDYSNLPPPPTASSYSAPPPPASLHGMSSSGTHLPQASKPAPKVDRPIVADGFHCSVGNPELAAKYGHIKTDIPMAPPPSASGLPARTCAGTGEGGEEGQRGPPRPAANPTQYSAFAAYGGRPPPRYVTYNANDNTSAPFIHPAGPPPPVQQPPGPPHWQQMHHQQSGGLLTHTGRNASSPPQTASPFSNESFQQAPSPAVPSGSPPSSSATSSPVPPAGYRASPLPPPPPPPHPSRHCSLPNSRPP 431
BLAST of EWM25372.1 vs. NCBI_GenBank
Match: gi|325189089|emb|CCA23616.1| (conserved hypothetical protein [Albugo laibachii Nc14] >gi|325189666|emb|CCA24150.1| conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 146.747 bits (369), Expect = 1.195e-36 Identity = 102/259 (39.38%), Postives = 135/259 (52.12%), Query Frame = 0 Query: 22 MFAFLSQG----PLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQEGVYFNAPDAGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAEP-EPAAGSL--AAVHNPDVIRDYSNLPPPPTASSYS---------APPPPASLHGMSSSGTHLPQASKPAPKVDRPIVADGFHCSVGNPELAAKYGHIKTDIPMAPPPS 264 MF+FL++ LG++LAP P +QLH AIEE +K +LL E LPIHTA G MI+ L++ G D R GN TLH AA + ETVK+L+ G + + RN RQTAYDVA+ +RQFLLPLQ R E AA L D + +L PPPT Y+ P P +++ + S +P+ + + RPI ADGF SVGN +L AK+G++K APPPS Sbjct: 1 MFSFLAEKLNVKNLGDILAPSSTPEEQLHAAIEEGMDEKFMRLLDESQLDLKNTLNPAGYLPIHTAAYHGRIRMIECLLDRGVDVNVLGPR-GNTTLHVAAAQSREETVKYLINRGANPAIRNNTRQTAYDVAKGDQIRQFLLPLQFRHEDLNEAAAYLPPGITPTTDPMDRKPDLAPPPTDLEYNTNLAQMPNAVPMMPNNMYA-APSHCAIPRNTAKITRTQRPIQADGFGSSVGNEQLTAKFGNVKAVKVTAPPPS 257
BLAST of EWM25372.1 vs. NCBI_GenBank
Match: gi|635361313|emb|CCI49697.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 142.124 bits (357), Expect = 5.176e-35 Identity = 102/263 (38.78%), Postives = 141/263 (53.61%), Query Frame = 0 Query: 22 MFAFLSQG----PLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQEGVY--FNAPD-AGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAE-PEPAAGSL--AAVHNPDVIRDYSNLPPPPTASSYSAPP------PPASLHGMSSSGTH--LPQASKPAPKVDRPIVADGFHCSVGNPELAAKYGHIKTDIPMAPPPSAS 266 MF+FL+ LG++LAP +P +QLH +IEE +K +LL + NA + AG LP+HTA G MI+ L++ G D + R GN TLH AA E VK+L+ G + + RN RQTAY+VA+ +RQFLLPLQ R E P AA L + D + + PPPT Y+ PP + + ++ +H +P+ + + RPI ADGF SVGN L AK+G++K APPPS S Sbjct: 1 MFSFLADKLNVKNLGDILAPTSSPEEQLHASIEEGIDEKFMRLLDDSQLDLINALNPAGY---LPVHTAAYHGRIRMIECLLDRGVDVNAIGPR-GNTTLHLAASQSHEEAVKYLINRGANPAIRNNTRQTAYEVAKGDYIRQFLLPLQFRHEDPNEAAAYLPPGITPSSDPMERKPEIAPPPTDLGYNTNSGQVPNAPPMQSNNLYAAPSHCAIPRNTAKITRTQRPIQADGFGSSVGNEALTAKFGNVKAVKVTAPPPSNS 259
BLAST of EWM25372.1 vs. NCBI_GenBank
Match: gi|298707864|emb|CBJ30270.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 131.724 bits (330), Expect = 3.887e-33 Identity = 71/147 (48.30%), Postives = 98/147 (66.67%), Query Frame = 0 Query: 22 MFAFLSQGPLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQ-EGVYFN-APDAGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRA 166 MF FL QG +GE++APV++ QL AI+ + DK +LL+ +GV N A D G P+H ACQ GN ++ +L+E+GAD +A D+ GN LH A+KGG + VK L+ G V +RN++R TAYDVA H++RQFLLPLQL+ Sbjct: 1 MFNFLLQGKVGEMMAPVQSQEAQLLIAIQNRQQDKIRELLEVKGVGANTANDRG---VRPMHMACQTGNNHLVQRLLELGADIITA-DKAGNTPLHYASKGGHTDMVKMLVGQGAAVEQRNSHRLTAYDVATDHVIRQFLLPLQLKV 143
BLAST of EWM25372.1 vs. NCBI_GenBank
Match: gi|1173942413|gb|OQR91424.1| (hypothetical protein ACHHYP_04714 [Achlya hypogyna]) HSP 1 Score: 135.191 bits (339), Expect = 9.727e-32 Identity = 104/264 (39.39%), Postives = 136/264 (51.52%), Query Frame = 0 Query: 22 MFAFLSQ----GPLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQE-GVYFNA--PDAGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAEP--EPAAG-------SLAAVHNPDVIRDYSNLPPPPTASS-YSAPPPPASLHGMSSSGTHLPQASKPAP----------------KVDRPIVADGFHCSVGNPELAAKYGH 252 MF++LS+ LGEL+AP P QQLHQAI + +K +L + V NA P+ + PIH+A AG + + L+E GAD + R GN LH A G E K L++ G +V++RN +T+YDVA+ +RQFLLPLQ + E E AA L H+P + + + + PPPTA Y A PP AS H P A+ AP V RPI ADGF SVGNPEL AKYG+ Sbjct: 1 MFSYLSETLNIKSLGELIAPTLTPEQQLHQAISDGLVEKVRHMLDDVKVSVNARTPEG----SYPIHSAAYAGRIDIFNMLLERGADITTLGPR-GNTPLHLACAQGHYELAKLLISRGANVAQRNQSGRTSYDVAKGDSLRQFLLPLQFQHEDPSERAAAVQQAHQMGLTGFHDPTIPQ--AAIAPPPTAGMPYGAGPPTASSGYQEDPMAHNPHAALYAPPTHSAIPRGAAARRDPTVYRPIQADGFGTSVGNPELTAKYGN 257
BLAST of EWM25372.1 vs. NCBI_GenBank
Match: gi|669144480|ref|XP_008607802.1| (hypothetical protein SDRG_03931 [Saprolegnia diclina VS20] >gi|530740736|gb|EQC38978.1| hypothetical protein SDRG_03931 [Saprolegnia diclina VS20]) HSP 1 Score: 128.642 bits (322), Expect = 1.403e-29 Identity = 101/268 (37.69%), Postives = 132/268 (49.25%), Query Frame = 0 Query: 22 MFAFLSQ----GPLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQE-GVYFNA--PDAGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAE--PEPAAG-------SLAAVHNPDVIRDYSNLPPPPTASSYSAPPPPASLHGMSSSGTHLPQASKP---------------------APKVDRPIVADGFHCSVGNPELAAKYGH 252 MF++LS+ LGEL+AP P QQLHQAI + +K LL + V NA P+ + PIH+A AG + + L+E GAD + R GN LH A G E K L+ G +V++RN +T+YDVA+ +RQFLLPLQ + E E AA L H+P + + + + PPPT+ Y + PP M P AS P PKV RPI ADGF SVGN EL A YG+ Sbjct: 1 MFSYLSETLNIKNLGELIAPTLTPEQQLHQAISDGLPEKVRHLLDDVKVSVNARTPEG----SYPIHSAAYAGRVDIFNLLLERGADITTLGPR-GNTPLHLACAQGHFELAKLLVGRGANVAQRNQSGRTSYDVAKGDSLRQFLLPLQFQHEDPTERAAAVQQAHQMGLTGFHDPTMPQ--AAIAPPPTSIPYGSAPP------MGGGYQDAPMASDPHAALYAPPTHSAIPRGAAARRDPKVTRPIAADGFGSSVGNAELTAFYGN 255
BLAST of EWM25372.1 vs. NCBI_GenBank
Match: gi|1173949248|gb|OQR97308.1| (hypothetical protein THRCLA_21955 [Thraustotheca clavata]) HSP 1 Score: 129.028 bits (323), Expect = 1.675e-29 Identity = 98/256 (38.28%), Postives = 135/256 (52.73%), Query Frame = 0 Query: 22 MFAFLSQG----PLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQEGVYFNAPDAGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAE--PEPAAG-------SLAAVHNPDVIRDYSNLPP-------PPTASSYSAPPPPASLH-GMSSSGTH--LPQ--ASKPAPKVDRPIVADGFHCSVGNPELAAKYGH 252 MF++LS+ +GE++AP P QQLHQAI + DK LL + V + + PIHTA AG + L+E GAD + R GN LH A G LE K L+A G +V++RN +T+YDVA+ +RQ+LLPLQ + E E AA L H+P + + PP PPT ++Y P + H + + TH +P+ A++ P V RPI ADGF SVGN EL AK+G+ Sbjct: 1 MFSYLSEALNIKSIGEMIAPTLTPEQQLHQAISDGLIDKVRHLLDD-VKVSVTARTPEGSYPIHTAAYAGQIEIFMLLLERGADISTLGPR-GNTPLHLACAQGHLELAKLLIARGANVAQRNQSNRTSYDVAKGDTLRQYLLPLQFQHEDPTERAAAVQQAHQLGLTGFHDPTLPQAPIAPPPMAGVPYGPPTTATYQEDPLANNPHAALYAPPTHNAIPRGAAARRDPTVFRPIQADGFGSSVGNAELTAKFGN 254
BLAST of EWM25372.1 vs. NCBI_GenBank
Match: gi|813165000|ref|XP_012203560.1| (hypothetical protein SPRG_09050 [Saprolegnia parasitica CBS 223.65] >gi|641531691|gb|KDO25751.1| hypothetical protein SPRG_09050 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 128.257 bits (321), Expect = 1.699e-29 Identity = 103/259 (39.77%), Postives = 134/259 (51.74%), Query Frame = 0 Query: 22 MFAFLSQ----GPLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQE-GVYFNA--PDAGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAE--PEPAAG-------SLAAVHNPDVIRDYSNLPP---PPTASSYSAPP----PPASL-----HGMSSSGTHLPQASKPAPKVDRPIVADGFHCSVGNPELAAKYGH 252 MF++LS+ LGEL+AP P QQLHQAI + +K LL + V NA P+ + PIH+A AG + + L+E GAD + R GN LH A G E K L++ G +V++RN +T+YDVA+ +RQFLLPLQ + E E AA L H+P + + PP PP Y P P A+L H GT A++ PKV RPIVADGF SVGN EL A YG+ Sbjct: 1 MFSYLSETLNIKNLGELIAPTLTPEQQLHQAISDGLPEKVRHLLDDVKVSVNARTPEG----SYPIHSAAYAGRVDIFNLLLERGADITTLGPR-GNTPLHLACAQGHFELAKLLVSRGANVAQRNQSARTSYDVAKGDSLRQFLLPLQFQHEDPTERAAAVQQAHQMGLTGFHDPTMPQAAIAPPPTSMPPMGGGYQDAPMANDPHAALYAPPTHSAIPRGT----AARRDPKVTRPIVADGFGSSVGNAELTAFYGN 250
BLAST of EWM25372.1 vs. NCBI_GenBank
Match: gi|675165561|ref|XP_008891665.1| (hypothetical protein PPTG_02352 [Phytophthora parasitica INRA-310] >gi|567993262|gb|ETL43444.1| hypothetical protein L916_06040 [Phytophthora parasitica] >gi|568107780|gb|ETN22404.1| hypothetical protein PPTG_02352 [Phytophthora parasitica INRA-310]) HSP 1 Score: 128.257 bits (321), Expect = 1.984e-29 Identity = 99/255 (38.82%), Postives = 133/255 (52.16%), Query Frame = 0 Query: 22 MFAFLSQG----PLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQEGVYFNAPDAGRGDA--LPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAE-PEPAAGSLAAVHNPDV--IRDYSNLPPPPTASSYSAPP-PPASL-------HGMSSSGTH--LPQA--SKPA-PKVDRPIVADGFHCSVGNPELAAKYGHIK 254 MF + ++ LGELLAP P Q+ H AIE+ HDK ++L E N + DA LPIHTA G I+ L+ D + R N LH AA + E VKFL+ HG + + RN +T YDVA+ +RQ+LLPLQ R E P AA L P V + + PPP + Y+AP PP + + + ++ TH +P+ S+ A PK RPI ADGF SVGN EL AK+G+ + Sbjct: 1 MFGYFAEKLNVKNLGELLAPTLTPEQEFHAAIEQGLHDKFVRMLDE---LNIDPNAKNDAGNLPIHTAAYYGRVDFIELLLTRNVDVNALCSRE-NSPLHYAAAQSRDEAVKFLVNHGANPALRNRSGRTPYDVAKGDNIRQYLLPLQFRHEDPAQAATMLPPGITPSVDPMAPRPVIAPPPLSGDYAAPQGPPIGMPQQQTPQNNLYAAATHSAIPRGGPSRVARPKDYRPIQADGFGSSVGNEELTAKFGNKR 251
BLAST of EWM25372.1 vs. NCBI_GenBank
Match: gi|570989697|gb|ETP47856.1| (hypothetical protein F442_06267 [Phytophthora parasitica P10297]) HSP 1 Score: 128.257 bits (321), Expect = 2.004e-29 Identity = 99/255 (38.82%), Postives = 133/255 (52.16%), Query Frame = 0 Query: 22 MFAFLSQG----PLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQEGVYFNAPDAGRGDA--LPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAE-PEPAAGSLAAVHNPDV--IRDYSNLPPPPTASSYSAPP-PPASL-------HGMSSSGTH--LPQA--SKPA-PKVDRPIVADGFHCSVGNPELAAKYGHIK 254 MF + ++ LGELLAP P Q+ H AIE+ HDK ++L E N + DA LPIHTA G I+ L+ D + R N LH AA + E VKFL+ HG + + RN +T YDVA+ +RQ+LLPLQ R E P AA L P V + + PPP + Y+AP PP + + + ++ TH +P+ S+ A PK RPI ADGF SVGN EL AK+G+ + Sbjct: 1 MFGYFAEKLNVKNLGELLAPTLTPEQEFHAAIEQGLHDKFVRMLDE---LNIDPNAKNDAGNLPIHTAAYYGRVDFIELLLTRNVDVNALCSRE-NSPLHYAAAQSRDEAVKFLVNHGANPALRNRSGRTPYDVAKGDNIRQYLLPLQFRHEDPAQAATMLPPGITPSVDPMAPRPVIAPPPLSGDYAAPQGPPIGMPQQQTPQNNLYAAATHSAIPRGGPSRVARPKDYRPIQADGFGSSVGNEELTAKFGNKR 251 The following BLAST results are available for this feature:
BLAST of EWM25372.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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