EWM25467.1, cds5298 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25467.1 vs. NCBI_GenBank
Match: gi|585107228|gb|EWM25467.1| (hypothetical protein Naga_100005g106 [Nannochloropsis gaditana]) HSP 1 Score: 529.25 bits (1362), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 Query: 1 MRHFYRYRICGVMLNARNKSSLPSCHVRLTIVGFRCKCVVYGREVGKERKRIMNFGLFLFAILPFPACAFFTAPAVTQSRVGSTVLRAIHEVHDFSTRQQHLSSTFQSLVLAGLGTTAGIALSTAPANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL 254 MRHFYRYRICGVMLNARNKSSLPSCHVRLTIVGFRCKCVVYGREVGKERKRIMNFGLFLFAILPFPACAFFTAPAVTQSRVGSTVLRAIHEVHDFSTRQQHLSSTFQSLVLAGLGTTAGIALSTAPANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL Sbjct: 1 MRHFYRYRICGVMLNARNKSSLPSCHVRLTIVGFRCKCVVYGREVGKERKRIMNFGLFLFAILPFPACAFFTAPAVTQSRVGSTVLRAIHEVHDFSTRQQHLSSTFQSLVLAGLGTTAGIALSTAPANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL 254
BLAST of EWM25467.1 vs. NCBI_GenBank
Match: gi|553178646|ref|XP_005852586.1| (hypothetical protein NGA_0714200 [Nannochloropsis gaditana CCMP526] >gi|422295950|gb|EKU23249.1| hypothetical protein NGA_0714200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 272.322 bits (695), Expect = 1.663e-90 Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 122 LSTAPANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL 254 +STAPANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL Sbjct: 1 MSTAPANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL 133
BLAST of EWM25467.1 vs. NCBI_GenBank
Match: gi|219128929|ref|XP_002184653.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403762|gb|EEC43712.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 86.6557 bits (213), Expect = 5.608e-17 Identity = 50/142 (35.21%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 119 GIALSTAP---ANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWK---DKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL 254 G +T+P A + ++L+EPT +F+ +++A F+RAAL++K+ ++ D++ P +T L + LD L + V + GLP GI + V IR+ R + + W + EI+Y+ L+ I YQQSPNT RD+ NP+ Sbjct: 74 GNVEATSPQSYAAPGARPKWLEEPTEDFKRNEQKATEFKRAALQRKQEFQAILDRFQEEPNDETI--LASDLDDLRRRVKQNGGLPQGISKEDTVKQIRR--RKARKPRYWPTQVEIAYQDLVSEILYQQSPNTDRDMDNPM 211
BLAST of EWM25467.1 vs. NCBI_GenBank
Match: gi|224010319|ref|XP_002294117.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970134|gb|EED88472.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 84.7297 bits (208), Expect = 2.494e-16 Identity = 55/132 (41.67%), Postives = 76/132 (57.58%), Query Frame = 0 Query: 124 TAPANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVL-PQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL 254 ++PA+A YL EPT EF+E +++ M F + L K + A L ++ TE+ELV L L + V++ GLP+GIK + D+ KV R K W EI+Y+KL I YQQSPNT +DL NPL Sbjct: 78 SSPASALET--YLTEPTEEFKESERQRMEFRKKQLLLKGGFVKVLARLTSESNTEEELVRDLSELKELVIQTGGLPLGIKKE----DMYKVIRGKKAKGNWPTNVEIAYQKLKSEIAYQQSPNTEKDLENPL 203
BLAST of EWM25467.1 vs. NCBI_GenBank
Match: gi|1072228656|gb|OEU13391.1| (hypothetical protein FRACYDRAFT_269797 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.0333 bits (201), Expect = 2.101e-15 Identity = 70/203 (34.48%), Postives = 98/203 (48.28%), Query Frame = 0 Query: 59 LFAILPFPACAFFTAPAVTQSRVGSTVLRAIHEVHDFSTRQQHLSSTFQSLVLAGLGTTAGIA--LSTAP---ANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWK---DKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNP 253 L A++P + FTAP T S ST R+ V LS+ + ++ + + AGIA AP A A + YL EPT EF+E + + MAF+R L KK + D + L +A LV L L +++ GLP+GIK L IR K G W AE++Y+ LI I +QQSPN ++ NP Sbjct: 10 LLAVMP-SSVYSFTAPTNTNS-CQST--RSCSHVS--------LSANRREILETAVASAAGIASFFVLAPPQEAMAEARPMYLSEPTDEFKENEAKGMAFKREQLAVKKEFNAALDTF--LNEANDSDALVKDLKDLQNLIVKAAGLPLGIKKDDLFKQIRSKKGKG----FWPVPAEVAYQSLIGEIRFQQSPNLDKENGNP 194
BLAST of EWM25467.1 vs. NCBI_GenBank
Match: gi|397640667|gb|EJK74246.1| (hypothetical protein THAOC_04086 [Thalassiosira oceanica]) HSP 1 Score: 81.6481 bits (200), Expect = 2.286e-15 Identity = 65/204 (31.86%), Postives = 100/204 (49.02%), Query Frame = 0 Query: 52 IMNFGLFLFAILPFPACAFFTAPAVTQSRVGSTVLRAIHEVHDFSTRQQHLSSTFQSLVLAGLGTTAGIALSTAPANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLP-QAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL 254 +M L + +I P AF AP+ +T L A + R+ ++ST + ++ +AL T YL EPT EF+E +++ + F R L K + A L ++ TE++L+ L+ L V++ GLP+GIK + ++ KV R+ K W EI+Y+ L I YQQSPNT +DL NPL Sbjct: 1 MMKSTLVILSIAAAPCTAF--APSSPAPHRAATDLSATTD------RRAMIASTLTAAASVAASSSPALALET----------YLTEPTEEFKESERQRLEFRRKQLALKGEFVKVIARLTTESTTEEQLIGDLEELRGLVVKTGGLPIGIKKE----EMYKVIRSKKAKGFWPTNVEIAYQGLKSEIRYQQSPNTEKDLENPL 182
BLAST of EWM25467.1 vs. NCBI_GenBank
Match: gi|298708974|emb|CBJ30927.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 73.9442 bits (180), Expect = 1.715e-12 Identity = 47/144 (32.64%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 96 STRQQHLSSTFQSLVLAGLGTTAGIALSTAPANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAIN 239 +TR+ LS + AG+ G+ L+T A A K EYLKEPT EF+ M+ R F A K+ + K +T++E V+ L+ ++ V++ GLP +++ L+ R+ K A KD+ W+ +I+YE L+ N Sbjct: 48 ATRRAFLSDQLVGAIGAGV---LGLGLATERATAYEK-EYLKEPTAEFKAMEARQADFSAAQRAYKQEFVKKLDAFLAVETDEEAVSTLNAMSNTVIQRGGLPESVRINDLLKTCRRKKAAMKDSGKWSTPVQIAYETLVQTTN 187
BLAST of EWM25467.1 vs. NCBI_GenBank
Match: gi|1210521592|dbj|GAX19582.1| (hypothetical protein FisN_19Hh160 [Fistulifera solaris]) HSP 1 Score: 65.0846 bits (157), Expect = 3.559e-9 Identity = 46/124 (37.10%), Postives = 64/124 (51.61%), Query Frame = 0 Query: 129 AATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQ-----AKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTS 247 A + YL EPT EF + +K+A F+R E+ KV K ++ L Q E L LD L + V + GLP+GI + +V +R+ K K W EI+Y+ L+ I YQQSPNT Sbjct: 84 APKRPTYLAEPTEEFRQNEKKASDFKR---EQLKV-KGQFMALLQKLQDDPNDETTLANDLDELRRLVRKGGGLPLGITKEEVVKQVRRRKAR----KFWPVNVEIAYQDLLAEIAYQQSPNTD 199
BLAST of EWM25467.1 vs. NCBI_GenBank
Match: gi|1210531726|dbj|GAX09693.1| (hypothetical protein FisN_19Lh160 [Fistulifera solaris]) HSP 1 Score: 64.6994 bits (156), Expect = 6.057e-9 Identity = 46/124 (37.10%), Postives = 63/124 (50.81%), Query Frame = 0 Query: 129 AATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQ-----AKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTS 247 A + YL EPT EF + +K+A F+R E+ KV K ++ L Q E L LD L + V + GLP+GI +V +R+ K K W EI+Y+ L+ I YQQSPNT Sbjct: 85 APKRPTYLAEPTEEFRQNEKKASDFKR---EQLKV-KGQFTALLQKLQDDPNDETTLANDLDELRRLVRKGGGLPLGITKDEVVKQVRRRKAR----KFWPVNVEIAYQDLLAEIAYQQSPNTD 200 The following BLAST results are available for this feature:
BLAST of EWM25467.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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