EWM25395.1, cds5297 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25395.1 vs. NCBI_GenBank
Match: gi|585107156|gb|EWM25395.1| (GCK domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 714.146 bits (1842), Expect = 0.000e+0 Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0 Query: 1 MYAHQLRIASRVGLGLGVAALVRSNSNSNSTTISKPTRCETAQHQQQLRRPSSQQQTYFDHALDDREKDTAGFVGVFLDAASVKRVQNAVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAKGSWDGVLPGQLLDGIKYPPTRAVFQELDAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECIQNFGLFREHLQEEAEEAAEISDEGKA 345 MYAHQLRIASRVGLGLGVAALVRSNSNSNSTTISKPTRCETAQHQQQLRRPSSQQQTYFDHALDDREKDTAGFVGVFLDAASVKRVQNAVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAKGSWDGVLPGQLLDGIKYPPTRAVFQELDAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECIQNFGLFREHLQEEAEEAAEISDEGKA Sbjct: 1 MYAHQLRIASRVGLGLGVAALVRSNSNSNSTTISKPTRCETAQHQQQLRRPSSQQQTYFDHALDDREKDTAGFVGVFLDAASVKRVQNAVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAKGSWDGVLPGQLLDGIKYPPTRAVFQELDAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECIQNFGLFREHLQEEAEEAAEISDEGKA 345
BLAST of EWM25395.1 vs. NCBI_GenBank
Match: gi|553178639|ref|XP_005852585.1| (hypothetical protein NGA_0714000 [Nannochloropsis gaditana CCMP526] >gi|422295949|gb|EKU23248.1| hypothetical protein NGA_0714000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0 Identity = 344/345 (99.71%), Postives = 344/345 (99.71%), Query Frame = 0 Query: 1 MYAHQLRIASRVGLGLGVAALVRSNSNSNSTTISKPTRCETAQHQQQLRRPSSQQQTYFDHALDDREKDTAGFVGVFLDAASVKRVQNAVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAKGSWDGVLPGQLLDGIKYPPTRAVFQELDAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECIQNFGLFREHLQEEAEEAAEISDEGKA 345 MYAHQ RIASRVGLGLGVAALVRSNSNSNSTTISKPTRCETAQHQQQLRRPSSQQQTYFDHALDDREKDTAGFVGVFLDAASVKRVQNAVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAKGSWDGVLPGQLLDGIKYPPTRAVFQELDAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECIQNFGLFREHLQEEAEEAAEISDEGKA Sbjct: 1 MYAHQFRIASRVGLGLGVAALVRSNSNSNSTTISKPTRCETAQHQQQLRRPSSQQQTYFDHALDDREKDTAGFVGVFLDAASVKRVQNAVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAKGSWDGVLPGQLLDGIKYPPTRAVFQELDAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECIQNFGLFREHLQEEAEEAAEISDEGKA 345
BLAST of EWM25395.1 vs. NCBI_GenBank
Match: gi|669148280|ref|XP_008609702.1| (hypothetical protein SDRG_05748 [Saprolegnia diclina VS20] >gi|530738679|gb|EQC36921.1| hypothetical protein SDRG_05748 [Saprolegnia diclina VS20]) HSP 1 Score: 83.1889 bits (204), Expect = 1.978e-14 Identity = 72/289 (24.91%), Postives = 127/289 (43.94%), Query Frame = 0 Query: 73 FVGVFLDAASVKRVQN---AVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAKGSWDGV------LPGQL--LDG------IKYPPTRAVFQELDAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEG-ECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECIQNFGLFREHLQEEAEEAAEISDEG 343 FVGVFLDA S K+++ AV + + +++ +P +FAP+ G ++ V+ +A+D T+ V+ V G + Y H ++ S S ++ + L RL + G L + + +G+ G+L D +P T A LD P+ G +C+ST YD +++ CI A E++ EC C +M PC F +++C+D++ + E + L +C + +C+ + L E E A + +DE Sbjct: 43 FVGVFLDAKSRKQLEERFAAVHAKIPDQSTVVLKYNPTADELSTFAPIMGHNVKIEVKALAQDEHTQAAVVAVSTEHGAVQ-YAVECPHVTL------SYSGEEGYSQAYANVLFERLQKTGSLTLEETDEGINVGLGAFEGELTAFDSKLFPFYSPFPATSAKMTVLDEPLVLSGVVCSSTGYDAETESCI----------------ATEIKKPECGFCKFMKAGPCGKQFTAWEACLDESKANGE-DFLEKCGGVTLLLRDCVDANPEYYSVLNEPPESADDDTDEA 307
BLAST of EWM25395.1 vs. NCBI_GenBank
Match: gi|813125155|ref|XP_012196621.1| (hypothetical protein SPRG_02667 [Saprolegnia parasitica CBS 223.65] >gi|641539155|gb|KDO32976.1| hypothetical protein SPRG_02667 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 82.4185 bits (202), Expect = 3.441e-14 Identity = 71/282 (25.18%), Postives = 123/282 (43.62%), Query Frame = 0 Query: 73 FVGVFLDAASVKRVQN---AVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAK----------GSWDGVLPG---QLLDGIK-YPPTRAVFQELDAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEG-ECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECIQNFGLFREHLQEEAEEA 336 FVGVFLDA S K+++ AV + + +++ +P +FAP+ G ++ V+ +AED T+ V+ V G + Y H ++ S S ++ + L RL + G L + G++DG L +L +P T A LD P+ G +C+ST YD +++ C+ A E++ EC C +M PC F +++C+D++ + E + L +C + +C+ + L E E A Sbjct: 43 FVGVFLDAKSRKQLEERFAAVHAKIPDQSTVVLKYNPTADELSTFAPIMGHNVKIEVKALAEDEHTQTAVVAVSTEHGAVQ-YAVECPHVTL------SYSGEEGYSQAYANVLFERLQKTGSLTLEETDEGINVGLGAFDGELAAFDSKLFPFYSPFPATSAKMTVLDEPLVLSGVVCSSTGYDAETESCV----------------ATEIKKPECGFCKFMKAGPCGKQFTAWEACLDESKAKGE-DFLEKCGGVTLLLRDCVDANPEYYSVLNEPPESA 300
BLAST of EWM25395.1 vs. NCBI_GenBank
Match: gi|1173937219|gb|OQR88056.1| (hypothetical protein ACHHYP_07665 [Achlya hypogyna]) HSP 1 Score: 77.411 bits (189), Expect = 2.093e-12 Identity = 67/264 (25.38%), Postives = 113/264 (42.80%), Query Frame = 0 Query: 73 FVGVFLDAASVKRVQN---AVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAKGSWDGVLPGQ-LLDG-------------IKYPPTRAVFQELDAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECI 319 FVGVFLDA S + ++ AV L +++ +P +FAP+ G ++ V+ VAED T+ ++ V G + Y H +I S S ++ + L RL + G L + + DG+ G DG +P T A LD P+ G +C+S YD ++ C TA+ + + EC C +M PC F +++C+D++ + E + L +C + +C+ Sbjct: 42 FVGVFLDAKSRQALEARFAAVHAKLPEQGAVVLKYNPTAAELGTFAPIMGQNVKIEVKAVAEDDHTQAAIVAVSTEHGPVQ-YAVECPHVTI------SYSGEEGYSQAYANVLFERLQKTGSLTLEETDDGINVGLGAFDGELASFDSKLFPFYSPFPATTAKMSVLDEPLVLSGVVCSSASYDASTETC-----TATEIKKP----------ECGFCKFMKAGPCGAQFTAWEACLDESKAKGE-DFLEKCGGPTLLLRDCV 282
BLAST of EWM25395.1 vs. NCBI_GenBank
Match: gi|698775700|ref|XP_009820894.1| (hypothetical protein H257_00077 [Aphanomyces astaci] >gi|574123019|gb|ETV88494.1| hypothetical protein H257_00077 [Aphanomyces astaci]) HSP 1 Score: 76.2554 bits (186), Expect = 5.624e-12 Identity = 83/325 (25.54%), Postives = 130/325 (40.00%), Query Frame = 0 Query: 14 LGLGVAALVRSNSNSNSTTISKPTRCETAQHQQQLRRPSSQQQTYFDHALDDREKDTAGFVGVFLDAAS---VKRVQNAVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAK----------GSWDGVLPG---QLLDGIK-YPPTRAVFQEL-DAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDERED-LTRCEASAAFVHECI 319 LG+GVAAL ++ S +++ T + Q +R FVGVFLDA S +K A+ G + + +++ +P +FAP+ G V ++ VA+D + + V G Y H ++ S S +D L RL G L S+DG LP +L +PPT+A L D P+ G +C S+ YD+ S C G A+K+ EC C +M PC D F +++C+D+ S E D L++C + +C+ Sbjct: 15 LGVGVAALTGGSAWSMTSSCENKTVSDETPKQATPKR--------------------MEFVGVFLDAKSQDAIKARFQALHGDVSAQSSVVLKYNPSKEELDAFAPILGKNVTVKIQAVAQDEHAQAAIASVSTEHGDVH-YAVECPHVTV------SVSGEDGYTRGYSNVLLERLQAAGYLTIDDSPEGLNVGLSSFDGTLPSFASKLFPFYNPFPPTQASLTILADGPLTLSGVLCTSSSYDEASHSC--------GPAKKA---------ECGFCLFMKAGPCGDQFTSWEACLDE--SKKEGADFLSKCGPQTLALRDCV 293
BLAST of EWM25395.1 vs. NCBI_GenBank
Match: gi|1173942564|gb|OQR91540.1| (hypothetical protein THRCLA_08955 [Thraustotheca clavata]) HSP 1 Score: 75.8702 bits (185), Expect = 6.158e-12 Identity = 62/265 (23.40%), Postives = 115/265 (43.40%), Query Frame = 0 Query: 73 FVGVFLDAASVKRVQN---AVGGSLGRNAHALVQLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLYPSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAKGSWDGVLPGQL-----LDGIK---------YPPTRAVFQELDAPVACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEG-ECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECI 319 FVGVFLDA S K + ++ L + +++ +P +FAP+ G ++ V+ +D T+ ++ V G + Y H +I S S ++ + L RL + G L + + DG+ G LD + +PPT A + + P+ G +C S+ YD ++++C +A E++ EC C +M PC F +++C+D++ + E + L +C + +C+ Sbjct: 41 FVGVFLDAKSQKELHERFASLHAKLPEQSAVVLKFNPTKDELSTFAPIMGHNVKIEVKAYVQDEHTQAAIVSVSTEHGAVQ-YAVECPHVAI------SYSGEEGYSQAYANVLFERLQKEGTLTLEETEDGINIGISPYSGELDAFESKLFAFYNPFPPTSAKVELIKEPLVLSGVVCTSSGYDVETEQC----------------KATEIKKPECGFCKFMKAGPCGAQFTAWEACLDESKAKGE-DFLEKCGEPTLLLRDCV 281
BLAST of EWM25395.1 vs. NCBI_GenBank
Match: gi|570953284|gb|ETP18541.1| (hypothetical protein F441_07247 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 70.4774 bits (171), Expect = 5.485e-10 Identity = 62/262 (23.66%), Postives = 108/262 (41.22%), Query Frame = 0 Query: 73 FVGVFLDAASVKRVQNAVGGSLGRNAHALV---QLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLY--PSRNGHGSIPTIAMASESWDDDV--ADLLGVDLARRLLENGILHAKGSWDGVLPG----QLLDGIKYPPTRAVFQELDAP----VACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECI 319 FVGVF++ S R++ G LV + P + +FAP+ G A++ V+G+AED + ++ V G Y + H ++ T A + V L D R LL++ W G LP L +P A ++DA +A +GT+C S+ +D + KC + + EC C +M PC F +++C+D+ + + + + +C A + +C+ Sbjct: 48 FVGVFVEKESAARLRKQFPAKFGSADEPLVVVLRFQPTVEEQEAFAPILGRAAKLHVKGLAEDDHAQTVLVAVTTETGESLEYEGAAEPAHATLSTSAGGLSAGYSSVLLERLRASDKLRYLLDDE--EDTNEWTGELPAFESKHLPLFSPFPAVEAKIVKVDAKHSEQLALQGTVCLSSRFDVATGKC------------------QAPKAECGFCKFMKAGPCGKEFTAWEACLDRCKKSGD-DFIEKCGAQTLALRDCV 288
BLAST of EWM25395.1 vs. NCBI_GenBank
Match: gi|675189923|ref|XP_008903846.1| (hypothetical protein PPTG_09814 [Phytophthora parasitica INRA-310] >gi|568095965|gb|ETN10720.1| hypothetical protein PPTG_09814 [Phytophthora parasitica INRA-310]) HSP 1 Score: 70.0922 bits (170), Expect = 5.967e-10 Identity = 62/262 (23.66%), Postives = 108/262 (41.22%), Query Frame = 0 Query: 73 FVGVFLDAASVKRVQNAVGGSLGRNAHALV---QLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLY--PSRNGHGSIPTIAMASESWDDDV--ADLLGVDLARRLLENGILHAKGSWDGVLPG----QLLDGIKYPPTRAVFQELDAP----VACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECI 319 FVGVF++ S R++ G LV + P + +FAP+ G A++ V+G+AED + ++ V G Y + H ++ T A + V L D R LL++ W G LP L +P A ++DA +A +GT+C S+ +D + KC + + EC C +M PC F +++C+D+ + + + + +C A + +C+ Sbjct: 48 FVGVFVEKESAARLRKQFPAKFGSADEPLVVVLRFQPTVEEQEAFAPILGRAAKLHVKGLAEDDHAQTVLVAVTTETGESLEYEGAAEPAHATLSTSAGGLSAGYSSVLLERLRASDKLRYLLDDE--EDTNEWTGELPAFESKHLPLFSPFPAVEAKIVKVDAKHSEQLALQGTVCLSSRFDVATGKC------------------QAPKAECGFCKFMKAGPCGKEFTAWEACLDRCKKSGD-DFIEKCGAQTLALRDCV 288
BLAST of EWM25395.1 vs. NCBI_GenBank
Match: gi|301100290|ref|XP_002899235.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262104152|gb|EEY62204.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 70.4774 bits (171), Expect = 1.361e-9 Identity = 59/261 (22.61%), Postives = 107/261 (41.00%), Query Frame = 0 Query: 72 GFVGVFLDAASVKRVQNAVGGSLGRNAHALV---QLHPEPGVKRSFAPLFGSKAEVVVRGVAEDVSTRQKVIIVDVNVGGGRLY--PSRNGHGSIPTIAMASESWDDDVADLLGVDLARRLLENGILHAKGSWDGVLPG----QLLDGIKYPPTRAVFQELDAP----VACEGTICASTDYDKQSDKCIIRADTASGMAEKSQDEAEEVEGECPLCTYMMNSPCKDVFVVFKSCIDKAGSTDEREDLTRCEASAAFVHECI 319 FVGVF++ S R++ G LV + P + +FAP+FG A++ V+G+AED + ++ V G Y + H ++ + S + + + L R L +G W G LP L +P A ++DA +A +GT+C S+ +D + +C + + EC C +M PC F +++C+D + + + + +C A + +C+ Sbjct: 45 NFVGVFVEKESAARLRQQFPAKFGSADEPLVVVLRFQPTEEEQEAFAPIFGRAAKLHVKGLAEDDHAQTVLVAVTTETGESLEYEGAAEPAHVTLTSAGGLSAGYSSVLLERLRASDKLRYLLDGD-EEINEWTGELPAFESKHLPLFSPFPAVEAKIVKVDAKQSEQLALQGTVCLSSRFDVATGEC------------------QAPKAECGFCKFMKAGPCGKEFTAWETCLDNCKKSGD-DFIEKCGAQTLALRDCV 285 The following BLAST results are available for this feature:
BLAST of EWM25395.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|