EWM25450.1, cds5285 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25450.1 vs. NCBI_GenBank
Match: gi|585107211|gb|EWM25450.1| (trna guanosine-2 -o-methyltransferase trm11-like protein [Nannochloropsis gaditana]) HSP 1 Score: 867.455 bits (2240), Expect = 0.000e+0 Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0 Query: 1 MYHDDRREMYGLGRASVPYLFFSRLLLLLYPPGASSFLPSSHPPPTHLPVTVTLAVGDAAPVVGPLPSPGVACRAPPRSKFLLLFKGGAADSGDQGTSLACLREAEFRGLAYRELQDLDAVAALRFEDALKTDLSLSGGRRKADKNEGRGRGCSSSSLVYVHGLPDDGKVMQAIVQSAVLVHAAYAVWACAPAFSECADVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHFLRQVPGPVDLKAPDVRLVLLEDGDAEAGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGGGRPASSCPARSPGDGGSRRERQHRHRSRHRQLPRPGPETSRGLPFRARGRPQGPRTPPTLGPFRRPGRRSSLWKEGKGACSRGRCHTRSRLHAL 436 MYHDDRREMYGLGRASVPYLFFSRLLLLLYPPGASSFLPSSHPPPTHLPVTVTLAVGDAAPVVGPLPSPGVACRAPPRSKFLLLFKGGAADSGDQGTSLACLREAEFRGLAYRELQDLDAVAALRFEDALKTDLSLSGGRRKADKNEGRGRGCSSSSLVYVHGLPDDGKVMQAIVQSAVLVHAAYAVWACAPAFSECADVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHFLRQVPGPVDLKAPDVRLVLLEDGDAEAGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGGGRPASSCPARSPGDGGSRRERQHRHRSRHRQLPRPGPETSRGLPFRARGRPQGPRTPPTLGPFRRPGRRSSLWKEGKGACSRGRCHTRSRLHAL Sbjct: 1 MYHDDRREMYGLGRASVPYLFFSRLLLLLYPPGASSFLPSSHPPPTHLPVTVTLAVGDAAPVVGPLPSPGVACRAPPRSKFLLLFKGGAADSGDQGTSLACLREAEFRGLAYRELQDLDAVAALRFEDALKTDLSLSGGRRKADKNEGRGRGCSSSSLVYVHGLPDDGKVMQAIVQSAVLVHAAYAVWACAPAFSECADVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHFLRQVPGPVDLKAPDVRLVLLEDGDAEAGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGGGRPASSCPARSPGDGGSRRERQHRHRSRHRQLPRPGPETSRGLPFRARGRPQGPRTPPTLGPFRRPGRRSSLWKEGKGACSRGRCHTRSRLHAL 436
BLAST of EWM25450.1 vs. NCBI_GenBank
Match: gi|909131781|gb|KNE58381.1| (hypothetical protein AMAG_18236 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 80.8777 bits (198), Expect = 2.389e-13 Identity = 51/170 (30.00%), Postives = 86/170 (50.59%), Query Frame = 0 Query: 174 IVQSAVLVHAAYAVWACAPAFSECADVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHF-LRQVPGPVDLKAPDVRLVLLEDGDAEAGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGG 342 +V+ A+LV A YA+W + ++ +L ++ R R N + S+ F ++ L K+ + F GP+DLK PDV +LED D ++ P ++ + G+R ++ SL++R Y+ TTSM+P+ SL+M ++ +R G V DP G G Sbjct: 89 LVRRAILVKAIYALWEESSSYD--------VLFDEIRRKPER-NTPYMTCSFKFVVETFNNSRA--LDYKVAVINRFAFMAFTGPIDLKNPDVTFGVLEDYDYKSDV-PRHLYFGIHLGSGNRAAIDKFSLKKRTYLGTTSMDPQLSLIMGNLGLVRPGTLVYDPFVGTG 246
BLAST of EWM25450.1 vs. NCBI_GenBank
Match: gi|471208676|ref|XP_004260933.1| (hypothetical protein EIN_185590 [Entamoeba invadens IP1] >gi|440301776|gb|ELP94162.1| hypothetical protein EIN_185590 [Entamoeba invadens IP1]) HSP 1 Score: 81.6481 bits (200), Expect = 4.582e-13 Identity = 51/197 (25.89%), Postives = 91/197 (46.19%), Query Frame = 0 Query: 154 SSSSLVYVHGLPDDGKVMQAIVQSAVLVHAAYAVWACAPAFSECADVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHFLRQVPGPVDLKAPDVRLVLLEDGD--AEAGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGGGRPASS 348 S+ VY++ D + ++ + +VL+ Y +W A + E + + L + ++ + F K+ R + + K + + L G VDLK PD+ + ++E+ + P ++ E+ G+R L SL+ RPY+ TTSM+P+ +MS+ REG +CDP AG G +S Sbjct: 47 STICNVYLYADFDSLEDIKKVCSRSVLIETVYEIWGEAKTYEELVPIVYS---KADELIPIYKGKTFKLKVTCF-GKNYRIPEQVKIFDKFKDFK--LYDYLGAVDLKNPDLNISIMENIGHLKKTSDVPQNIYYGIELCYGNRKLMTHFSLKVRPYIGTTSMDPELCCLMSNFGCCREGSVMCDPFAGTGSTLVTS 237
BLAST of EWM25450.1 vs. NCBI_GenBank
Match: gi|780061141|ref|XP_011670421.1| (PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog, partial [Strongylocentrotus purpuratus]) HSP 1 Score: 80.8777 bits (198), Expect = 7.795e-13 Identity = 58/180 (32.22%), Postives = 92/180 (51.11%), Query Frame = 0 Query: 171 MQAIVQSAVLVHAAYAVWACAPAFSE-CA--DVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHFLRQVP--GPVDLKAPDVRLVLLEDGDAE---AGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGG 342 MQ ++ +VL +A VWA +SE CA D R +E + + S+ + + F G++ A KL M+ +P GPV ++ PD + ED + A +PH++++ R I+ G + L R S++ R ++ TSM+ SLVM++ AG+REGD V DP G G Sbjct: 44 MQKLMNRSVLSRSAIEVWAHGSTYSEVCAGLDAVPRDEME----KYCKEDVSFCFKVHTF----GKQLSSA---AKLDTMKRLQDHLPLKGPVKMRDPDQVFYIFEDYGVQPNQAPDKPHRIFVGRWISDGQKRLAHRYSVKTRHFIGNTSMDALLSLVMTNQAGVREGDLVLDPFVGTG 212
BLAST of EWM25450.1 vs. NCBI_GenBank
Match: gi|1133419286|ref|XP_019865191.1| (PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog [Aethina tumida]) HSP 1 Score: 78.9518 bits (193), Expect = 2.376e-12 Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 0 Query: 254 VPGPVDLKAPDVRLVLLEDGDAEAG---ARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGGG 343 V GPV+LK PDV +E +A P+QV+ R IA G R L ++ SL+ R ++ TSM+P+ SL+M++ A ++EGD V DP G G Sbjct: 134 VQGPVNLKNPDVLFQYIEYYGTKANNPPEYPYQVFFGRWIANGLRQLIKKFSLKTRKFIGNTSMDPQLSLLMANQAKIKEGDLVLDPFVGSGS 226
BLAST of EWM25450.1 vs. NCBI_GenBank
Match: gi|909150811|gb|KNE72886.1| (hypothetical protein AMAG_17123 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 79.7221 bits (195), Expect = 2.754e-12 Identity = 53/170 (31.18%), Postives = 90/170 (52.94%), Query Frame = 0 Query: 174 IVQSAVLVHAAYAVWACAPAFSECADVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHF-LRQVPGPVDLKAPDVRLVLLEDGDAEAGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGG 342 +V+ ++LV A YA+W + ++ LL+ R R NA + S+ F ++ + L K+ + F GP+DLK+PDV L +LED D ++ P ++ ++ G+R ++ SL++R Y+ TTSM+P+ SL+M ++ +R G V DP G G Sbjct: 116 LVRRSILVKAIYALWEESRSYE--------ALLDQIRRKPER-NAPYMTCSFKFVVET--FNNSRALDYKVAIINRFAFMAFTGPIDLKSPDVTLGVLEDYDYKSDV-PRYLYFGIQLGFGNRPAIDKFSLKKRTYLGTTSMDPQLSLIMGNLGLVRPGTLVYDPFVGTG 273
BLAST of EWM25450.1 vs. NCBI_GenBank
Match: gi|1069673232|ref|XP_018318156.1| (PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog isoform X2 [Trachymyrmex zeteki]) HSP 1 Score: 77.0258 bits (188), Expect = 1.106e-11 Identity = 51/187 (27.27%), Postives = 85/187 (45.45%), Query Frame = 0 Query: 160 YVHGLPDDGKVMQAIVQSAVLVHAAYAVWACAPAFSECADVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHFLRQVPGPVDLKAPDVRLVLLED---GDAEAGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGGG 343 ++ L D+ V Q I AV + +WA A E + +++ ++ S+ F +R+ + + Y + GPV LK PD+ L +E + PH+ + + IA G R L ++LSL+ R ++ TSM+P+ SL+M++ A +R GD V DP G G Sbjct: 15 WIVDLSDENLVHQ-IASRAVSLRFCLQLWAQAEQNKELHNSLKAYSIKNLETLTIDKKKSFKIVVETFCKHYSQREKINKIESFSY------LPLEGPVKLKNPDITLCYIEYYGLNPNDIPEEPHEYFFGKWIADGQRELIQKLSLKTRKFIGNTSMDPQLSLIMANQAQIRNGDLVFDPFVGTGS 194
BLAST of EWM25450.1 vs. NCBI_GenBank
Match: gi|1069673229|ref|XP_018318155.1| (PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog isoform X1 [Trachymyrmex zeteki]) HSP 1 Score: 77.0258 bits (188), Expect = 1.250e-11 Identity = 51/187 (27.27%), Postives = 85/187 (45.45%), Query Frame = 0 Query: 160 YVHGLPDDGKVMQAIVQSAVLVHAAYAVWACAPAFSECADVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHFLRQVPGPVDLKAPDVRLVLLED---GDAEAGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGGG 343 ++ L D+ V Q I AV + +WA A E + +++ ++ S+ F +R+ + + Y + GPV LK PD+ L +E + PH+ + + IA G R L ++LSL+ R ++ TSM+P+ SL+M++ A +R GD V DP G G Sbjct: 50 WIVDLSDENLVHQ-IASRAVSLRFCLQLWAQAEQNKELHNSLKAYSIKNLETLTIDKKKSFKIVVETFCKHYSQREKINKIESFSY------LPLEGPVKLKNPDITLCYIEYYGLNPNDIPEEPHEYFFGKWIADGQRELIQKLSLKTRKFIGNTSMDPQLSLIMANQAQIRNGDLVFDPFVGTGS 229
BLAST of EWM25450.1 vs. NCBI_GenBank
Match: gi|672809220|ref|XP_008859648.1| (RNA methylase family UPF0020 protein [Entamoeba nuttalli P19] >gi|407036126|gb|EKE38018.1| RNA methylase family UPF0020 protein [Entamoeba nuttalli P19]) HSP 1 Score: 76.6406 bits (187), Expect = 1.791e-11 Identity = 47/193 (24.35%), Postives = 89/193 (46.11%), Query Frame = 0 Query: 159 VYVHGLPDDGKVMQAIVQSAVLVHAAYAVWACAPAFSECADVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHF-LRQVPGPVDLKAPDVRLVLLEDGD--AEAGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGGGRPASS 348 VY++ + ++ I +VL+ Y +W A + E + E L + ++ + F GR ++ + + F L G V+LK P++ + ++E+ +A +P ++ + +G+R L SL+ RPY+ TTSM+P+ ++MS++ R G +CDP G G +S Sbjct: 40 VYMYATFESLDDIKKICSRSVLIKTVYEIWGEAKTYEELVPIVYSKADE---LIPIHKGKTFRLKVTCF----GRNYKQPEQIERFDKFKDFKLYDYLGSVNLKKPELSIAIMENIGHLKKATEQPKNIYFGYSLCKGNRKLVNHFSLKVRPYIGTTSMDPELCVIMSNMGCCRPGTVMCDPFTGTGSTLVTS 225
BLAST of EWM25450.1 vs. NCBI_GenBank
Match: gi|183230417|ref|XP_655659.2| (hypothetical protein [Entamoeba histolytica HM-1:IMSS] >gi|169802922|gb|EAL50235.2| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] >gi|449705862|gb|EMD45822.1| RNA methylase family UPF0020 protein [Entamoeba histolytica KU27] >gi|480522848|gb|ENY62202.1| RNA methylase family UPF0020 protein, putative [Entamoeba histolytica HM-1:IMSS-A] >gi|1033410525|dbj|GAT92324.1| hypothetical protein conserved [Entamoeba histolytica]) HSP 1 Score: 76.6406 bits (187), Expect = 1.841e-11 Identity = 47/193 (24.35%), Postives = 89/193 (46.11%), Query Frame = 0 Query: 159 VYVHGLPDDGKVMQAIVQSAVLVHAAYAVWACAPAFSECADVATRMLLEDARLSSLRANASWAAESYVFSAKSGRRKDVALLPQKLYEMRHF-LRQVPGPVDLKAPDVRLVLLEDGD--AEAGARPHQVWLTREIARGSRGLTERLSLRRRPYVTTTSMEPKASLVMSHVAGLREGDKVCDPMAGGGGRPASS 348 VY++ + ++ I +VL+ Y +W A + E + E L + ++ + F GR ++ + + F L G V+LK P++ + ++E+ +A +P ++ + +G+R L SL+ RPY+ TTSM+P+ ++MS++ R G +CDP G G +S Sbjct: 40 VYMYATFESLDDIKKICSRSVLIKTVYEIWGEAKTYEELVPIVYSKADE---LIPIHKGKTFRLKVTCF----GRNYKQPEQIERFDKFKDFKLYDYLGSVNLKKPELSIAIMENIGHLKKATEQPKNIYFGYSLCKGNRKLVNHFSLKVRPYIGTTSMDPELCVIMSNMGCCRPGTVMCDPFTGTGSTLVTS 225 The following BLAST results are available for this feature:
BLAST of EWM25450.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|