EWM25392.1, cds5279 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25392.1 vs. NCBI_GenBank
Match: gi|585107153|gb|EWM25392.1| (glutathione peroxidase [Nannochloropsis gaditana]) HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 Query: 1 MAKLLSFLLLTQSAVISYGFIGKPCYPTKSGGERHAATTLRMRMTSAGVAPDVLTFKNGSPLKLSRAAYLQKLAALTLGGVSLAGKSGSASAVPAAEGPDLNSILLQKAGKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVLQGKKLPSARKKSLNEY 274 MAKLLSFLLLTQSAVISYGFIGKPCYPTKSGGERHAATTLRMRMTSAGVAPDVLTFKNGSPLKLSRAAYLQKLAALTLGGVSLAGKSGSASAVPAAEGPDLNSILLQKAGKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVLQGKKLPSARKKSLNEY Sbjct: 1 MAKLLSFLLLTQSAVISYGFIGKPCYPTKSGGERHAATTLRMRMTSAGVAPDVLTFKNGSPLKLSRAAYLQKLAALTLGGVSLAGKSGSASAVPAAEGPDLNSILLQKAGKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVLQGKKLPSARKKSLNEY 274
BLAST of EWM25392.1 vs. NCBI_GenBank
Match: gi|825866530|ref|WP_047152339.1| (glutathione peroxidase [Aneurinibacillus tyrosinisolvens]) HSP 1 Score: 154.836 bits (390), Expect = 1.543e-43 Identity = 74/141 (52.48%), Postives = 100/141 (70.92%), Query Frame = 0 Query: 122 KATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVLQGKK 262 KA ++VN AS+C T Y GLQ+LYEKY +QG EILAFPSNQF QEP E+++N + +GV FP+++K+DVNG AHPL+A L + P L G + + WNFTKFL+N G PV+RY P V PEE++A+I+ +L+ K Sbjct: 24 KALLIVNTASKCGFTP-QYSGLQQLYEKYKEQGFEILAFPSNQFLNQEPGTNEEIQNFCQTAYGVMFPVFEKIDVNGADAHPLFAYLTESTPGLLG-TKAVKWNFTKFLVNKQGIPVKRYAPAVKPEELDAEIIRLLEEGK 162
BLAST of EWM25392.1 vs. NCBI_GenBank
Match: gi|922330211|ref|XP_003630523.2| (phospholipid hydroperoxide glutathione peroxidase [Medicago truncatula] >gi|657375833|gb|AET04999.2| phospholipid hydroperoxide glutathione peroxidase [Medicago truncatula]) HSP 1 Score: 156.762 bits (395), Expect = 1.848e-43 Identity = 78/151 (51.66%), Postives = 97/151 (64.24%), Query Frame = 0 Query: 110 GKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVLQG 260 G V GD KGK ++VNVASQC LT NY L +LYEKY +GLEILAFP NQFG QEP VE+++N + RF EFP++DKVDVNG A P+Y LK + L G K WNF+KFL++ +G V RY P P +E D+L +L Sbjct: 86 GNDVNLGDYKGK-VLIIVNVASQCGLTNSNYTELSQLYEKYKSKGLEILAFPCNQFGAQEPGSVEEIQNFVCTRFKAEFPVFDKVDVNGATAAPIYKYLKSSKGGLFGDGIK--WNFSKFLVDKNGNVVDRYAPTTSPLSIEKDLLKLLDA 233
BLAST of EWM25392.1 vs. NCBI_GenBank
Match: gi|922330213|ref|XP_003630521.2| (phospholipid hydroperoxide glutathione peroxidase [Medicago truncatula] >gi|657375834|gb|AET04997.2| phospholipid hydroperoxide glutathione peroxidase [Medicago truncatula]) HSP 1 Score: 154.451 bits (389), Expect = 2.290e-43 Identity = 77/149 (51.68%), Postives = 97/149 (65.10%), Query Frame = 0 Query: 110 GKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVL 258 G V GD KGK ++VNVASQC LT NY L +LYEKY +GLEILAFP NQFG QEP VE+++N + RF EFP++DKVDVNG A P+Y LK + L G + WNF+KFL++ +G V RY P P +E D+L +L Sbjct: 20 GNDVNLGDYKGK-VLIIVNVASQCGLTNSNYTELSQLYEKYKSKGLEILAFPCNQFGAQEPGSVEEIQNFVCTRFKAEFPVFDKVDVNGATAAPIYKYLKSSKGGLFG--DGIKWNFSKFLVDKNGNVVDRYAPTTSPLSIEKDLLKLL 165
BLAST of EWM25392.1 vs. NCBI_GenBank
Match: gi|401716808|gb|AFP99878.1| (glutathione peroxidase, partial [Medicago sativa]) HSP 1 Score: 155.992 bits (393), Expect = 3.213e-43 Identity = 78/151 (51.66%), Postives = 97/151 (64.24%), Query Frame = 0 Query: 110 GKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVLQG 260 G V GD KGK ++VNVASQC LT NY L +LYEKY +GLEILAFP NQFG QEP VE+++N + RF EFP++DKVDVNG A P+Y LK + L G K WNF+KFL++ +G V RY P P +E D+L +L Sbjct: 76 GNDVNLGDYKGK-VLIIVNVASQCGLTNSNYTELSQLYEKYKSKGLEILAFPCNQFGAQEPGSVEEIQNFVCTRFKAEFPVFDKVDVNGATAAPIYKYLKSSKGGLFGDGIK--WNFSKFLVDKNGNVVDRYAPTTSPLSIEKDLLKLLDA 223
BLAST of EWM25392.1 vs. NCBI_GenBank
Match: gi|388508640|gb|AFK42386.1| (unknown [Medicago truncatula]) HSP 1 Score: 155.221 bits (391), Expect = 6.940e-43 Identity = 77/151 (50.99%), Postives = 97/151 (64.24%), Query Frame = 0 Query: 110 GKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVLQG 260 G V GD KGK ++VNVASQC LT NY L +LYEKY +GLEILAFP NQFG QEP VE+++N ++ RF FP++DKVDVNG A P+Y LK + L G K WNF+KFL++ +G V RY P P +E D+L +L Sbjct: 86 GNDVNLGDYKGK-VLIIVNVASQCGLTNSNYTELSQLYEKYKSKGLEILAFPCNQFGAQEPGSVEEIQNFVRTRFKAGFPVFDKVDVNGATAAPIYKYLKSSKGGLFGDGIK--WNFSKFLVDKNGNVVDRYAPTTSPLSIEKDLLKLLDA 233
BLAST of EWM25392.1 vs. NCBI_GenBank
Match: gi|232190|sp|P30708.1|GPX4_NICSY (RecName: Full=Probable phospholipid hydroperoxide glutathione peroxidase; Short=PHGPx; AltName: Full=6P229 >gi|19739|emb|CAA42780.1| unnamed protein product [Nicotiana sylvestris]) HSP 1 Score: 151.754 bits (382), Expect = 2.328e-42 Identity = 78/149 (52.35%), Postives = 95/149 (63.76%), Query Frame = 0 Query: 110 GKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVL 258 G V KGK ++VNVASQC LT NY L E+Y+KY DQGLEILAFP NQFG QEP +E+++N + RF E+PI+DKVDVNG A PLY LK + G S K WNF+KFL++ +G V RY P P ME DI +L Sbjct: 21 GNDVDLSIYKGK-VLIIVNVASQCGLTNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIK--WNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLL 166
BLAST of EWM25392.1 vs. NCBI_GenBank
Match: gi|698451932|ref|XP_009778797.1| (PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase [Nicotiana sylvestris] >gi|1025012280|ref|XP_016441615.1| PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase [Nicotiana tabacum]) HSP 1 Score: 153.68 bits (387), Expect = 2.761e-42 Identity = 78/149 (52.35%), Postives = 95/149 (63.76%), Query Frame = 0 Query: 110 GKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVL 258 G V KGK ++VNVASQC LT NY L E+Y+KY DQGLEILAFP NQFG QEP +E+++N + RF E+PI+DKVDVNG A PLY LK + G S K WNF+KFL++ +G V RY P P ME DI +L Sbjct: 84 GNDVDLSIYKGK-VLIIVNVASQCGLTNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIK--WNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLL 229
BLAST of EWM25392.1 vs. NCBI_GenBank
Match: gi|20138338|sp|Q9FXS3.1|GPX4_TOBAC (RecName: Full=Probable phospholipid hydroperoxide glutathione peroxidase; Short=PHGPx; AltName: Full=Nt-SubC08 >gi|10798756|dbj|BAB16430.1| glutathione peroxidase NtEIG-C08 [Nicotiana tabacum]) HSP 1 Score: 151.369 bits (381), Expect = 3.826e-42 Identity = 77/149 (51.68%), Postives = 95/149 (63.76%), Query Frame = 0 Query: 110 GKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVL 258 G V KGK ++VNVASQC LT NY + E+Y+KY DQGLEILAFP NQFG QEP +E+++N + RF E+PI+DKVDVNG A PLY LK + G S K WNF+KFL++ +G V RY P P ME DI +L Sbjct: 21 GNDVDLSIYKGK-VLIIVNVASQCGLTNSNYTDMTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIK--WNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLL 166
BLAST of EWM25392.1 vs. NCBI_GenBank
Match: gi|593794029|ref|XP_007160053.1| (hypothetical protein PHAVU_002G288700g [Phaseolus vulgaris] >gi|561033468|gb|ESW32047.1| hypothetical protein PHAVU_002G288700g [Phaseolus vulgaris]) HSP 1 Score: 152.91 bits (385), Expect = 6.101e-42 Identity = 76/151 (50.33%), Postives = 95/151 (62.91%), Query Frame = 0 Query: 110 GKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKYHDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGGAHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEMEADILSVLQG 260 G + GD KGK ++VNVASQC LT NY L +LYEKY +GLEILAFP NQFG QEP E+++ + RF EFP++DKVDVNG A PLY LK + L G + WNF+KFL++ +G V RY P P ME D+L +L Sbjct: 83 GTEINLGDYKGK-VLIIVNVASQCGLTNSNYTELSQLYEKYKQKGLEILAFPCNQFGAQEPGSNEQIQEFVCTRFKAEFPVFDKVDVNGDKADPLYKYLKSSKGGLFG--DNIKWNFSKFLVDKEGKVVDRYAPTTSPLSMEKDLLKLLDA 230 The following BLAST results are available for this feature:
BLAST of EWM25392.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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