EWM25343.1, cds5274 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25343.1 vs. NCBI_GenBank
Match: gi|585107104|gb|EWM25343.1| (subfamily member 9 [Nannochloropsis gaditana]) HSP 1 Score: 743.421 bits (1918), Expect = 0.000e+0 Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0
Query: 1 MGALEAMTTPQAQVAKAFGKKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAEVRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQMSSFLQSLEEKYGKGKKPKDRGHRRCGFRAPAGLPLQKESGGATRLAPQIWRATHVLRRARRVDISVVGARGHFVARSVITTPWRSMGWPGVYTRWKTARGRSRVGCATVDELIGWNSLSVSLKHALIDD 362
MGALEAMTTPQAQVAKAFGKKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAEVRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQMSSFLQSLEEKYGKGKKPKDRGHRRCGFRAPAGLPLQKESGGATRLAPQIWRATHVLRRARRVDISVVGARGHFVARSVITTPWRSMGWPGVYTRWKTARGRSRVGCATVDELIGWNSLSVSLKHALIDD
Sbjct: 1 MGALEAMTTPQAQVAKAFGKKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAEVRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQMSSFLQSLEEKYGKGKKPKDRGHRRCGFRAPAGLPLQKESGGATRLAPQIWRATHVLRRARRVDISVVGARGHFVARSVITTPWRSMGWPGVYTRWKTARGRSRVGCATVDELIGWNSLSVSLKHALIDD 362
BLAST of EWM25343.1 vs. NCBI_GenBank
Match: gi|225708218|gb|ACO09955.1| (DnaJ homolog subfamily C member 9 [Osmerus mordax]) HSP 1 Score: 176.407 bits (446), Expect = 1.062e-49 Identity = 93/231 (40.26%), Postives = 148/231 (64.07%), Query Frame = 0
Query: 20 KKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAE-VRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQMSSF---LQSLEEKYGK 246
K LYE++ V KDA+ A +R+ Y+K++LT HPD+ PED +AT +FQAL V+A LSD D+R YDE G + E ++Q+ + W +YWR +FP +T++ I F++ Y+ ++EE +D+ + YEE+QG M+ +++SV+ AT EDEGRFR +++ AI + K F E K RK++A+KE KEAE++ + + +A + R +Q + F + +LE+KY K
Sbjct: 12 KTSNLYEVIGVTKDASEAEVRRGYYKISLTVHPDRAPEDEQATVKFQALGKVYAVLSDKDQRAIYDEQGIVDEESDSIDQN-RNWEEYWRTMFPKITLQDILDFEKSYKYTDEEKQDLKRVYEESQGDMNKIMESVLCATQEDEGRFRDILQGAIDAGELTAYKGFTHESATKKKSRKRKAQKEEKEAEQMQKEMGMTSESSLVAMIQRKQQANQTEFNYLIANLEDKYCK 241
BLAST of EWM25343.1 vs. NCBI_GenBank
Match: gi|1173958889|gb|OQS05185.1| (hypothetical protein THRCLA_02636 [Thraustotheca clavata]) HSP 1 Score: 168.703 bits (426), Expect = 1.650e-46 Identity = 108/239 (45.19%), Postives = 151/239 (63.18%), Query Frame = 0
Query: 7 MTTPQAQVAKAFGKKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAEVRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQMSSFLQSLEEKYG 245
MTT ++ + FG++ LY IL V K ++ ++ AY K AL HPDK P+DPEAT +FQ L +H++LS+ D R YDETGE+ E E S ++W +YWRALFP VTV+ I+ F+ YR+SEEEA+DVLKAYE+ +GKM ++D +ML+T+ D RF +I+ AI + V + + K + K+AE EAK AEEL+ I+ + ALA RQQ +S L +LE KY
Sbjct: 1 MTTTMEKIEQHFGERD-LYAILGVKKTCTASELKTAYRKTALKFHPDKNPDDPEATTKFQLLCTIHSSLSNPDLRAVYDETGELEVEATE-TASFKDWLEYWRALFPKVTVKDIENFETSYRDSEEEAQDVLKAYEKYKGKMQSILDVIMLSTENDIERFSDIIQRAIDAEEVP-MYPAFKKKPKAKRNNKKAEAEAKAAEELMAKIRGKADGGALAK----RQQGFASLLSNLEAKYA 232
BLAST of EWM25343.1 vs. NCBI_GenBank
Match: gi|742202697|ref|XP_010893939.1| (PREDICTED: dnaJ homolog subfamily C member 9 [Esox lucius] >gi|742202701|ref|XP_010893940.1| PREDICTED: dnaJ homolog subfamily C member 9 [Esox lucius]) HSP 1 Score: 164.466 bits (415), Expect = 4.567e-45 Identity = 92/234 (39.32%), Postives = 148/234 (63.25%), Query Frame = 0
Query: 20 KKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAE-VRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQ----MSSFLQSLEEKYGKGK 248
K LY+++ V KDA+ A IR+ Y+K++L HPD+ D +ATA+FQAL V+A LSDAD+R YDE G I E +++ ++ W +YWR +FP +T++ I F++ Y++SEEE D+++AYEE +G M ++++V+ AT EDE R R +++ A+ +K + + F E +K RK++A+KE KEAEE+ + + D+L M + Q+ ++ + LE KY K K
Sbjct: 12 KTSNLYDVIGVTKDASEAEIRRGYYKVSLQVHPDRATGDEQATAKFQALGKVYAVLSDADQRAIYDEQGVIDEESDSVDR-DRNWEEYWRTMFPKITLQDILDFEKSYKDSEEEKHDLMRAYEEHKGDMDKIMENVLCATQEDEPRIRAILQCALDSKELPPHRAFTNESAKKKSVRKRKADKERKEAEEMQKEM-GLDSEDSLVAMIKKNQKSKEAGFNNLMDDLEAKYCKKK 243
BLAST of EWM25343.1 vs. NCBI_GenBank
Match: gi|673023174|ref|XP_008865548.1| (hypothetical protein H310_03455 [Aphanomyces invadans] >gi|574478776|gb|ETW05771.1| hypothetical protein H310_03455 [Aphanomyces invadans]) HSP 1 Score: 164.466 bits (415), Expect = 9.394e-45 Identity = 97/242 (40.08%), Postives = 140/242 (57.85%), Query Frame = 0
Query: 7 MTTPQAQVAKAFGKKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAE---VRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQMSSFLQSLEEKYG 245
M++ ++ FG LY IL V K A + ++ AY K AL HPDK ++ +AT +FQ L +HA LS+AD R YDETGEI ++ + +S +W YWRALFP +T I F+ YR S EE++D+L+AY++ +GK ++D V+LA DED RF +I+ AI + V FK + +K +K+ + EAK AE+L+ I+ R G A+A R Q S L LE+KY
Sbjct: 1 MSSTLDRIRAHFGHT-DLYRILHVKKTATESELKTAYRKQALKHHPDKNLDNDDATEKFQLLCTIHAVLSNADSRAVYDETGEIEADSSTDTKSFNDWVAYWRALFPPLTENDITSFEATYRGSAEESKDLLEAYKKHKGKWQNILDVVILARDEDIDRFEDIIQAAIDDGSVPLFPAFKKKPVVAKKSASARKKQDAEAKAAEDLIAQIRGRNGRSAMAK----RSAQFDSLLSKLEDKYA 237
BLAST of EWM25343.1 vs. NCBI_GenBank
Match: gi|669141406|ref|XP_008606265.1| (hypothetical protein SDRG_02454 [Saprolegnia diclina VS20] >gi|530742324|gb|EQC40566.1| hypothetical protein SDRG_02454 [Saprolegnia diclina VS20]) HSP 1 Score: 164.081 bits (414), Expect = 1.213e-44 Identity = 99/224 (44.20%), Postives = 139/224 (62.05%), Query Frame = 0
Query: 14 VAKAFGKKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAEVRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQMSSFL 237
V +FG++ LY IL V A +A ++ AY K AL HPDK P+D EAT +FQ L +HA LS + R YDETGE+ +E E + S ++W DYWR LFP VT + I F++EYR S+EEARDVL AYE+ +GK + ++D VML++D+D RF K+I+EAI V F +K +K + +++K A EA+ E + RG A + + RQQ +S L
Sbjct: 9 VEASFGQRD-LYAILGVEASATTAQLKTAYRKKALKYHPDKNPDDDEATTKFQLLCTIHAALSSPELRAVYDETGELETEATETS-SFRDWVDYWRNLFPKVTTKDIQSFEQEYRGSDEEARDVLNAYEKYKGKWTSIMDVVMLSSDDDMDRFSKIIQEAIDANEVPLYPAF---TKKTIKTRSKSKKVAAEAKAAEELLAKIRGNQAGGALAK-RQQGFASLL 226
BLAST of EWM25343.1 vs. NCBI_GenBank
Match: gi|1158922585|ref|XP_020309085.1| (dnaJ homolog subfamily C member 9-like [Oncorhynchus kisutch] >gi|1158922587|ref|XP_020309086.1| dnaJ homolog subfamily C member 9-like [Oncorhynchus kisutch] >gi|1158922589|ref|XP_020309087.1| dnaJ homolog subfamily C member 9-like [Oncorhynchus kisutch]) HSP 1 Score: 162.155 bits (409), Expect = 3.544e-44 Identity = 94/243 (38.68%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 20 KKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAE-VRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQ----MSSFLQSLEEKYGKGKKPKDRGHRR 257
K LY+++ V DA+ A +R+ Y+K++L HPD+ P D +ATA+FQ L V+A LSD D+R YDE G + E L+Q ++ W +YWR +FP +T++ I F++ Y++SEEE D+++ YEE +G M +++++V+ AT EDE R R +++ AI +K + K F E +K RK++A+KE KEAEE+ + + D+L M + Q+ ++F+ +LE KY K K+P R+
Sbjct: 12 KTSNLYDVIGVTNDASEAEVRRGYYKVSLQVHPDRSPGDGQATAKFQTLGKVYAVLSDKDQRAIYDEQGIVDEESDSLDQ-DRNWEEYWRTMFPKITLQDILNFEKSYKDSEEEKHDLMRVYEEHKGDMDMIMENVLCATQEDEPRIRAVLQCAIDSKVLLAHKAFTNESAKKKSSRKRKADKERKEAEEMQKEM-GLNSEDSLVAMIKKNQKSKEAGFNNFMDNLEAKYCK-KRPSSSSGRK 251
BLAST of EWM25343.1 vs. NCBI_GenBank
Match: gi|1168912011|ref|XP_020498731.1| (dnaJ homolog subfamily C member 9 [Labrus bergylta]) HSP 1 Score: 161.77 bits (408), Expect = 4.656e-44 Identity = 98/242 (40.50%), Postives = 149/242 (61.57%), Query Frame = 0
Query: 20 KKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCF-KAEVRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQ----QMSSFLQSLEEKYGKGKKPKDRGHR 256
K + LYE+L V K+AA A IR++Y+K++L HPD+ PEDP AT +FQ L ++A LSDA++R YDE G + E L+Q ++ W DYWR LFP +TV+ I F+++Y+ S+EE +D+++ Y + QG M + S + + EDE R +I+ AI N+ V F + + +K R+KRA++E +EAEE+ + + D+L M + RQQ +SFL LE KY K + +G R
Sbjct: 12 KTQNLYEVLGVNKEAAEADIRRSYYKVSLRVHPDRAPEDPLATEKFQVLGKLYAVLSDAEQRAVYDEQGLVDEESDALSQ-DRCWEDYWRLLFPKITVQDILEFEKKYKGSDEERQDLIQLYVQHQGDMDAITASALCCSQEDEPRLCGIIQAAIQNEEVTAFPAFTQEKEKKKKARRKRADRERQEAEEMQKEMGLGDEDDSLVMMLKQRQQSREKNFNSFLSDLEAKYSKKGEKSQKGKR 252
BLAST of EWM25343.1 vs. NCBI_GenBank
Match: gi|1211273333|ref|XP_021420518.1| (dnaJ homolog subfamily C member 9-like [Oncorhynchus mykiss] >gi|642125623|emb|CDQ61431.1| unnamed protein product [Oncorhynchus mykiss]) HSP 1 Score: 161.77 bits (408), Expect = 4.775e-44 Identity = 93/243 (38.27%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 20 KKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAE-VRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQ----MSSFLQSLEEKYGKGKKPKDRGHRR 257
K LY+++ V DA+ A +R+ Y+K++L HPD+ P D +ATA+FQ L V+A LSD D+R YDE G + E L+Q ++ W +YWR +FP +T++ I F++ Y++SEEE D+++ YEE +G M +++++V+ AT EDE R R +++ AI +K + K F E +K RK++A+KE KEAEE+ + + D+L M + Q+ ++F+ ++E KY K K+P R+
Sbjct: 12 KTSNLYDVIGVTNDASEAEVRRGYYKVSLQVHPDRSPGDGQATAKFQTLGKVYAVLSDKDQRAIYDEQGIVDEESDSLDQ-DRNWEEYWRTMFPKITLQDILNFEKSYKDSEEEKHDLMRVYEEHKGDMDMIMENVLCATQEDEPRIRAVLQCAIDSKVLPAHKAFTNESAKKKSSRKRKADKERKEAEEMQKEM-GLNSEDSLVAMIKKNQKSKEAGFNNFMDNMEAKYCK-KRPSSSSGRK 251
BLAST of EWM25343.1 vs. NCBI_GenBank
Match: gi|929274236|ref|XP_014013821.1| (PREDICTED: dnaJ homolog subfamily C member 9 [Salmo salar] >gi|929274238|ref|XP_014013822.1| PREDICTED: dnaJ homolog subfamily C member 9 [Salmo salar]) HSP 1 Score: 161.384 bits (407), Expect = 7.389e-44 Identity = 93/243 (38.27%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 20 KKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRVKRLKCFKAE-VRKDLKRKKRAEKEAKEAEELLEAIQARRGPDALATMGRDRQQQ----MSSFLQSLEEKYGKGKKPKDRGHRR 257
K LY+++ V DA+ A +R+ Y+K++L HPD+ P D +ATA+FQ L V+A LS+ D+R YDE G + E L+Q ++ W +YWR +FP +T++ I F++ Y++SEEE D+++ YEE +G M +++++V+ AT EDE R R +++ AI +K + K F E +K RK++A+KE KEAEE+ + + D+L M + Q+ ++F+ +LE KY K K+P R+
Sbjct: 12 KTSNLYDVIGVTNDASEAEVRRGYYKVSLQVHPDRSPGDGQATAKFQTLGKVYAVLSNKDQRAIYDEQGIVDEESDSLDQ-DRNWEEYWRTMFPKITLQDILNFEKSYKDSEEEKHDLMRVYEEHKGDMDMIMENVLCATQEDEPRIRAILQCAIDSKELLAHKAFTNESAKKKSSRKRKADKERKEAEEMQKEM-GLNSEDSLVAMIKKNQKSKEAGFNNFMDNLEAKYCK-KRPSSSSGRK 251 The following BLAST results are available for this feature:
BLAST of EWM25343.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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