EWM25416.1, cds5260 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25416.1 vs. NCBI_GenBank
Match: gi|585107177|gb|EWM25416.1| (Prolyl 4-hydroxylase, alpha subunit [Nannochloropsis gaditana]) HSP 1 Score: 1087.79 bits (2812), Expect = 0.000e+0 Identity = 526/526 (100.00%), Postives = 526/526 (100.00%), Query Frame = 0
Query: 1 MKNSSQEIDSPRPQHLQPIPASGEASFSTALQRKYEDLFPPTAQVKLKEALHDNGVLDENLFSKHKAATRGRRSEAARSYSILPFQIKRLFFSRNAGDIRLNNRLLKLLHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYTDCTVDEQVRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAVEAVSPRRLVTFFVYLNSLPRGQGHTVFPKLNGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPIRKEGFMKFAINIWITDKNLQALAFSNSGVVLDPSKVISGKRTILASIDPPCCICRSHKQQNLFKTCDHCDLSYHRLCLSPEERPSAPNGPRRFWTCPRCPGKRPRPGDFCEVCGGGDREHLIVLCDSCERGFHTTCLGVRKVPKEAYFCDSCRAKEKVKARTIRSREEGACHMCGSIDRPHHILLCDGCDGGWHLQCVGLARVPRGSWFCRLCTKTASRRRKGPAKRSKKYEAKSNK 526
MKNSSQEIDSPRPQHLQPIPASGEASFSTALQRKYEDLFPPTAQVKLKEALHDNGVLDENLFSKHKAATRGRRSEAARSYSILPFQIKRLFFSRNAGDIRLNNRLLKLLHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYTDCTVDEQVRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAVEAVSPRRLVTFFVYLNSLPRGQGHTVFPKLNGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPIRKEGFMKFAINIWITDKNLQALAFSNSGVVLDPSKVISGKRTILASIDPPCCICRSHKQQNLFKTCDHCDLSYHRLCLSPEERPSAPNGPRRFWTCPRCPGKRPRPGDFCEVCGGGDREHLIVLCDSCERGFHTTCLGVRKVPKEAYFCDSCRAKEKVKARTIRSREEGACHMCGSIDRPHHILLCDGCDGGWHLQCVGLARVPRGSWFCRLCTKTASRRRKGPAKRSKKYEAKSNK
Sbjct: 1 MKNSSQEIDSPRPQHLQPIPASGEASFSTALQRKYEDLFPPTAQVKLKEALHDNGVLDENLFSKHKAATRGRRSEAARSYSILPFQIKRLFFSRNAGDIRLNNRLLKLLHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYTDCTVDEQVRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAVEAVSPRRLVTFFVYLNSLPRGQGHTVFPKLNGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPIRKEGFMKFAINIWITDKNLQALAFSNSGVVLDPSKVISGKRTILASIDPPCCICRSHKQQNLFKTCDHCDLSYHRLCLSPEERPSAPNGPRRFWTCPRCPGKRPRPGDFCEVCGGGDREHLIVLCDSCERGFHTTCLGVRKVPKEAYFCDSCRAKEKVKARTIRSREEGACHMCGSIDRPHHILLCDGCDGGWHLQCVGLARVPRGSWFCRLCTKTASRRRKGPAKRSKKYEAKSNK 526
BLAST of EWM25416.1 vs. NCBI_GenBank
Match: gi|873237554|emb|CEL97705.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 171.785 bits (434), Expect = 9.138e-45 Identity = 106/296 (35.81%), Postives = 152/296 (51.35%), Query Frame = 0
Query: 86 QIKRLFFSRNAGDI-RLNNRLLKLLHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYT-DCTVDEQVRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAVE-------------------------------AVSPRRLVTFFVYLNSLP-RGQGHTVFPKLNGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPIRKEGFMKFAINIWITDKNLQALAFSNSGVVLDPSKVISGKRTILASIDPPCCICRSHK 347
Q KRLF++ + R+ R L+L+HR P++YA D+FL+ +E + Q +F+ S+T D +E V + RTS++ L K G + +R +E RAA+ VGLP EN EPLQ++ Y +FD+HHD G D AV A PRR++T FVYL SLP G T FP +N RF P+R RAL W N+ DG+ DPR++H+ P +G K +N+WITD AL G V PS+ G T + + C + ++H+
Sbjct: 25 QFKRLFYTSKPQAVERICGRTLELVHRTPNIYACDEFLTESELSYIAQYYSQHHDEFQRSFTQDLENEELVYDECRTSTYTHLPKCGSTVIRNIERRAADCVGLPHENVEPLQLLSYAPGQYFDIHHDAGRLEGDVDAVGLKLPGAASGGRSREDFQDSPPDIRVVMPDAFAEEPRRILTAFVYLTSLPDSAGGETDFPLIN-QRF--HPRRGRALFWSNLFPDGTADPRVVHQARPT-LDGHRKMGMNVWITDTPQTALV----GTVSQPSRQEHGTHTTVRA----CSLSQAHR 308
BLAST of EWM25416.1 vs. NCBI_GenBank
Match: gi|1210521646|dbj|GAX19636.1| (hypothetical protein FisN_19Hh216 [Fistulifera solaris]) HSP 1 Score: 136.732 bits (343), Expect = 8.606e-33 Identity = 78/229 (34.06%), Postives = 125/229 (54.59%), Query Frame = 0
Query: 86 QIKRLFFSRNAGDIRLNN--RLLKLLHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYTDCTVD-EQVRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAVE-----AVSPRRLVTFFVYLNSLPRGQGHTVFPKLNGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPIRKEGFMKFAINIWITDK 306
++ LFFS D L++ + + +H P++Y +++FL+ E +L + + +F+ S+ D + + RTS+F+S K D + +E RAA+++G+ P E LQ+V Y FF +HHD+G Y+++ VE SPRRLVT F YLN G G T FPK + ++P A+L+ NVL DG PD R +H G+P +K+ +NIW ++
Sbjct: 72 RLNELFFSATP-DTALSSYKKPWRKVHAEPNIYVLENFLTTKEISHLMDFVATK--RFQRSFVDGENNTSSIDRWHRTSTFLSFAKQHDKTIATIEQRAADLLGIQPRALEALQLVRYEQGQFFGIHHDLGIYDEEEDTVELPPKTTWSPRRLVTLFCYLNDCSEG-GATYFPK---AQLRVQPVAGSAVLFSNVLSDGMPDVRTLHAGEPPTSTQCVKYGLNIWFCEE 293
BLAST of EWM25416.1 vs. NCBI_GenBank
Match: gi|1210531780|dbj|GAX09747.1| (hypothetical protein FisN_19Lh216 [Fistulifera solaris]) HSP 1 Score: 129.413 bits (324), Expect = 3.371e-30 Identity = 74/228 (32.46%), Postives = 121/228 (53.07%), Query Frame = 0
Query: 86 QIKRLFFSRNAG-DIRLNNRLLKLLHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYTDCTVD-EQVRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAV-----EAVSPRRLVTFFVYLNSLPRGQGHTVFPKLNGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPIRKEGFMKFAINIWITDK 306
++ +LFFS + + + +H P++Y +++FL+ E +L + + +F+ S+ D + + + RTS+F+S K D + +E RAA+++G E LQ+V Y FF VHHD+G Y+++ V SPRRLVT F YLN G G TVFPK + ++P A+L+ NV+ G PD R +H G+P +K+ +NIW ++
Sbjct: 72 RLDQLFFSSTPKRALSSYKKPWEKVHAEPNIYVLENFLTTKEISHLMEFVATK--RFQRSFVDGENNISSIDRSHRTSTFLSFAKQHDKTIATIEQRAADLLGTQTRALEGLQLVRYEQGQFFGVHHDLGIYDEEEDTVALPPKTTWSPRRLVTLFCYLNDCSEG-GATVFPK---AQLRVQPAAGNAVLFSNVMSGGMPDVRTLHAGEPPTSPQCVKYGLNIWFCEE 293
BLAST of EWM25416.1 vs. NCBI_GenBank
Match: gi|219129000|ref|XP_002184687.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403796|gb|EEC43746.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 125.561 bits (314), Expect = 9.918e-30 Identity = 83/207 (40.10%), Postives = 114/207 (55.07%), Query Frame = 0
Query: 109 LHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYTDCTV---DEQVRNASRTSSFISLRKGGDSKVRAVENRAAEIVG-LPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAV-----EAVSPRRLVTFFVYLNSLPRGQGHTVFPKLNGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPIRKEGFMKFAINIWITDK 306
+H +P++Y I+DFL+ TE + L I GKF+ SY D + V RTS+F+S K DSKV ++E +AA I+G EPLQ+V Y FF HHDMG +D G V S RRLVT F YLN + +G G T F + PK RA+++ NVL DG PD R +H G+P+ +K+ +NIWI ++
Sbjct: 2 VHSSPNIYIIEDFLTPTELDYLRSKICA--GKFQRSYVDAIESGGNSIVDKEHRTSTFLSFGKQQDSKVASIEAKAATILGCWSSRIVEPLQLVRYLPGQFFGEHHDMGDLQQD-GTVALPPKSLFSKRRLVTLFCYLNKVEKG-GATGFRYCE---LKVPPKPGRAVMFSNVLPDGMPDSRTVHSGEPVLDG--VKYGLNIWICEE 199
BLAST of EWM25416.1 vs. NCBI_GenBank
Match: gi|1072228670|gb|OEU13405.1| (hypothetical protein FRACYDRAFT_189308 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 120.939 bits (302), Expect = 3.125e-27 Identity = 79/224 (35.27%), Postives = 118/224 (52.68%), Query Frame = 0
Query: 94 RNAGDIRLNNRLLKLLHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYTD---CTVDEQ----VRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGT-YNKDTGAV---EAVSPRRLVTFFVYLNSLPRGQGH-TVFPKL-NGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPIRKE-GFMKFAINIWI 303
++ +I++ +K +Y ID+FL+ E I F S+ D C Q V ++ RTS+F S +K DSK+ A+E R A ++G E LQ+V Y+ +FF +HHD+G + DT + + S RRLVT F YLN+L +G T FP + + +KPKR RA+LW N+ G PDP+ IH G+ + E G K+ +NIW+
Sbjct: 57 QSKNEIKVRRATVKPYPEEASIYVIDNFLTEAELVYFDRKIATI--PFERSFVDNAECYDKRQPATLVDDSHRTSTFYSFKKSHDSKISALERRIATMLGCWVHQIEALQLVRYQPGEFFGIHHDLGNLLDDDTVQLPPKDHGSKRRLVTLFCYLNTLQDDEGGCTYFPNVGSDSHLRVKPKRGRAVLWSNIGIGGKPDPKTIHAGETVISEAGTKKYGLNIWV 278
BLAST of EWM25416.1 vs. NCBI_GenBank
Match: gi|873231776|emb|CEM07669.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 118.627 bits (296), Expect = 1.618e-24 Identity = 81/212 (38.21%), Postives = 108/212 (50.94%), Query Frame = 0
Query: 112 NPHVYAIDDFLSGTEFENLGHLID---QQFGKFRASYT--DCTVDEQVRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDM-----------GTYNKDTGAVEAVSPRRLVTFFVYLNSLPRGQGH-TVFPKLNGGRFSIKPKRLRALLWCNVLE-DGSPDPRLIHRGDPIRKEGFMKFAINIWITD 305
P +YAID+FL E +L I+ QQ G FR S T D V E++R R+SS + + K VR +E RAA GLP + EPLQIV Y+ + + VHHDM G Y E R+ T VYL+SL G G T FP GG P R A++W N+ + D +PD R H G I + G K+A+NIW+++
Sbjct: 141 QPPIYAIDNFLREEELAHLALFIELKEQQSGGFRRSLTEDDRGVPEEMRE--RSSSSVRIPKAATHLVRNIERRAAACFGLPASHVEPLQIVRYQRGEEYRVHHDMVELHKKGRGWGGVYLDSPSDEEKAKGVRVGTILVYLHSLDNGVGGCTHFPLPQGG-LDFTPVRGLAIMWSNIKDADLTPDLRTAHEGKKILRSGCNKYALNIWVSN 349
BLAST of EWM25416.1 vs. NCBI_GenBank
Match: gi|167516714|ref|XP_001742698.1| (hypothetical protein, partial [Monosiga brevicollis MX1] >gi|163779322|gb|EDQ92936.1| predicted protein, partial [Monosiga brevicollis MX1]) HSP 1 Score: 108.227 bits (269), Expect = 2.946e-24 Identity = 59/146 (40.41%), Postives = 85/146 (58.22%), Query Frame = 0
Query: 147 DCTVDEQVRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAVEAVSPRRLVTFFVYLNSLPRGQ---GHTVFPKLNGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPI 289
D + + V +A RTS F L K DS V +E RAA+++G EPLQ+V Y+ F +HHD GT + G VE V+P R T FVYLN++P + G+T FP+L ++PKR RA+++ N+ DG+ +P IH P+
Sbjct: 1 DNDLGQPVTSAYRTSKFTWLEKSADSLVAQIERRAADLLGTEALCIEPLQVVSYQQGQQFKLHHDAGTLLERDGGVELVTPLRTATIFVYLNTIPATRSCAGYTHFPRLG---LKVQPKRGRAVVFPNLRADGTVEPATIHAALPM 143
BLAST of EWM25416.1 vs. NCBI_GenBank
Match: gi|294889729|ref|XP_002772943.1| (prolyl 4-hydroxylase alpha subunit, putative [Perkinsus marinus ATCC 50983] >gi|239877523|gb|EER04759.1| prolyl 4-hydroxylase alpha subunit, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 106.301 bits (264), Expect = 2.639e-21 Identity = 91/290 (31.38%), Postives = 132/290 (45.52%), Query Frame = 0
Query: 40 PPTAQVKLKEALHDNGVLDENLFSKHKAATRGRRSEAARSYSILPFQIKRLFFSRNAGDIRLNNRLLKLLHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYT--------DCTVDEQV--RNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAVEAVSPRRLVTFFVYLNSLPRGQ-GHTVFPKLNGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPIRKEGFMKFAINIWITDKNLQALAFSNSGV 318
P TA+ ++ DEN+F A R S+ + + + + + G RL+ ++ R+P V + DFL+ E E ++I GK+R S D D+ V R+ RTSS L D V +E RAA +VG P ++ E L ++ Y +FF HHD G + R T F+ LN +PRG G T+FP L I+PK AL+W N LEDG D R++H P G K+AIN ++ +K + L S S V
Sbjct: 109 PQTARQMVERKEEQAKASDENIFE----ARLKRDSDGEKKPPVPVDENSKTVGNSEEGVTRLS---AYVICRSPKVRLVPDFLTPEECE---YMISLAEGKWRPSTVGRSSSSISDGKSDKYVNKRSKGRTSSSFMLLHSQDDVVAEIERRAASLVGFPADHVERLNMLRYESGEFFGQHHD-GAF-------------RPWTVFITLNDIPRGAGGETLFPALG---LKIRPKAGTALVWPNCLEDGQADDRVVHEALP--PTGVRKYAINCFVNEKPVAELVRSTSSV 369
BLAST of EWM25416.1 vs. NCBI_GenBank
Match: gi|1001616502|gb|KXS20245.1| (hypothetical protein M427DRAFT_52489 [Gonapodya prolifera JEL478]) HSP 1 Score: 98.9821 bits (245), Expect = 4.049e-19 Identity = 75/222 (33.78%), Postives = 105/222 (47.30%), Query Frame = 0
Query: 106 LKLLHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYTDCTVDEQ------VRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAVEAV-SPRRLVTFFVYLNSLPRGQGHTVFPKLN-----------------GGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRG-DPIRKEGFMKFAINIW 302
+ ++ R+P + ID+FL E E HL+ + S T D++ V + RTSS L + GD +R VE RAA G P NTE LQ V Y + VHHD A + +R+ TFFVYLN +P+G G T FP +N G ++ P++ RA W NV ++G+ D R +H G P+ E KF +NIW
Sbjct: 119 VHIISRDPLLMVIDNFLRTGEPE---HLVQTATPLYSRSTVVSTTDDEENKEFRVVSDYRTSSTAYLPRNGDPVIRCVEARAAAFSGYPVRNTESLQSVHYGVGQQYKVHHDWFPPEDPISAPHLLRGGQRVSTFFVYLNDVPKG-GRTWFPSVNVSALAPGAGGLGWGVDDEGGVAVWPRKGRAAFWINVDKEGNGDSRTLHAGMPPLDGE---KFGLNIW 333 The following BLAST results are available for this feature:
BLAST of EWM25416.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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