EWM25375.1, cds5248 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25375.1 vs. NCBI_GenBank
Match: gi|585107136|gb|EWM25375.1| (Uncharacterized protein family UPF0041 [Nannochloropsis gaditana]) HSP 1 Score: 311.997 bits (798), Expect = 1.238e-107 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 MTRPSRRSASLNRLPFTKASVGYINCNFSMALGVVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRKFTATPNSMSVASSS 154
MTRPSRRSASLNRLPFTKASVGYINCNFSMALGVVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRKFTATPNSMSVASSS
Sbjct: 1 MTRPSRRSASLNRLPFTKASVGYINCNFSMALGVVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRKFTATPNSMSVASSS 154
BLAST of EWM25375.1 vs. NCBI_GenBank
Match: gi|325183343|emb|CCA17801.1| (CSH putative [Albugo laibachii Nc14]) HSP 1 Score: 166.007 bits (419), Expect = 2.840e-50 Identity = 79/120 (65.83%), Postives = 94/120 (78.33%), Query Frame = 0
Query: 30 MALGVVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRKFTATPNSMS 149
M G+V L+A++LA + NNP V++ L HPAGPFTIHFWAP+FKWGISLANIAD R E IS+PQQ+A+TATG+IWSRYS VITP N+NLFSVN FMA TG QL+RK T T N+ S
Sbjct: 1 MFFGIVPRLQAKVLATDIVANNPSVRSFLQHPAGPFTIHFWAPAFKWGISLANIADMRRSPETISLPQQIAITATGVIWSRYSLVITPKNWNLFSVNVFMAGTGLSQLYRKATYTKNTES 120
BLAST of EWM25375.1 vs. NCBI_GenBank
Match: gi|635369437|emb|CCI42368.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 156.762 bits (395), Expect = 1.372e-46 Identity = 76/115 (66.09%), Postives = 88/115 (76.52%), Query Frame = 0
Query: 30 MALGVVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRKFTAT 144
M G V L+A++LA + NP ++ L HPAGPFTIHFWAP+FKWGISLANIAD R E IS+PQQ+A+TATGIIWSRYS VITP N+NLFSVN FMA TG QL+RK T T
Sbjct: 1 MFSGFVPRLQAKVLAADIVAKNPSFRSFLQHPAGPFTIHFWAPAFKWGISLANIADMRRSPETISLPQQIAITATGIIWSRYSLVITPKNWNLFSVNVFMAATGLTQLFRKATYT 115
BLAST of EWM25375.1 vs. NCBI_GenBank
Match: gi|675181149|ref|XP_008899459.1| (hypothetical protein PPTG_07053 [Phytophthora parasitica INRA-310] >gi|566032180|gb|ETI55091.1| hypothetical protein F443_02218 [Phytophthora parasitica P1569] >gi|567969842|gb|ETK94909.1| hypothetical protein L915_02128 [Phytophthora parasitica] >gi|567998225|gb|ETL48302.1| hypothetical protein L916_02092 [Phytophthora parasitica] >gi|568027442|gb|ETM01397.1| hypothetical protein L917_02028 [Phytophthora parasitica] >gi|568057944|gb|ETM54592.1| hypothetical protein L914_02110 [Phytophthora parasitica] >gi|568100082|gb|ETN14781.1| hypothetical protein PPTG_07053 [Phytophthora parasitica INRA-310] >gi|570335880|gb|ETO83828.1| hypothetical protein F444_02224 [Phytophthora parasitica P1976] >gi|570959893|gb|ETP24872.1| hypothetical protein F441_02191 [Phytophthora parasitica CJ01A1] >gi|570996239|gb|ETP52889.1| hypothetical protein F442_02176 [Phytophthora parasitica P10297] >gi|970637073|gb|KUF81266.1| hypothetical protein AM587_10014612 [Phytophthora nicotianae] >gi|970658375|gb|KUF96144.1| Kinesin protein [Phytophthora nicotianae]) HSP 1 Score: 154.451 bits (389), Expect = 1.129e-45 Identity = 72/125 (57.60%), Postives = 91/125 (72.80%), Query Frame = 0
Query: 30 MALGVVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRKFTATPNSMSVASSS 154
M +V ++ ++L + N+P++ A+L HPAGPFT+HFWAP+FKWGISLAN+AD R E ISV QQ AVTATG+IWSRYS VITP N+NLF+VN FMA TG Q +RKFT P + A+ S
Sbjct: 1 MLPSIVPRIQQKVLEQQIVANSPKLTAMLSHPAGPFTVHFWAPTFKWGISLANVADMKRSPETISVAQQTAVTATGLIWSRYSLVITPKNWNLFAVNVFMAGTGLVQFYRKFTYDPKKVEEAAKS 125
BLAST of EWM25375.1 vs. NCBI_GenBank
Match: gi|302846262|ref|XP_002954668.1| (hypothetical protein VOLCADRAFT_109934 [Volvox carteri f. nagariensis] >gi|300260087|gb|EFJ44309.1| hypothetical protein VOLCADRAFT_109934 [Volvox carteri f. nagariensis]) HSP 1 Score: 148.673 bits (374), Expect = 1.254e-43 Identity = 67/90 (74.44%), Postives = 80/90 (88.89%), Query Frame = 0
Query: 53 RVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRKFT 142
+++A +HPAGP TIHFWAP+FKWGISLANIAD NRPAE IS+PQQ A+TATG+IWSRYS ITPVNYNL +VNAFMA+TG+YQL+RK +
Sbjct: 6 KLQAFWNHPAGPKTIHFWAPTFKWGISLANIADINRPAEKISLPQQCAITATGVIWSRYSTQITPVNYNLLAVNAFMALTGAYQLFRKIS 95
BLAST of EWM25375.1 vs. NCBI_GenBank
Match: gi|833488480|ref|XP_012768525.1| (BRAIN PROTEIN 44/YHR162W(YEAST) like protein, putative [Babesia bigemina] >gi|656185941|emb|CDR96339.1| BRAIN PROTEIN 44/YHR162W(YEAST) like protein, putative [Babesia bigemina]) HSP 1 Score: 149.058 bits (375), Expect = 1.645e-43 Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 0
Query: 33 GVVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWR 139
GVV L+A++LA+ + + KAVL HPAGPFTIHF+AP+FKWGIS+AN+AD NRP + +S+PQQLAV+ TGIIWSRYS VITPVNYNL +VNA MAVTG YQ+ R
Sbjct: 12 GVVPVLQAKVLALPLPE---KAKAVLAHPAGPFTIHFYAPTFKWGISIANLADINRPTDKLSLPQQLAVSCTGIIWSRYSTVITPVNYNLLAVNAAMAVTGVYQISR 115
BLAST of EWM25375.1 vs. NCBI_GenBank
Match: gi|669151302|ref|XP_008611213.1| (hypothetical protein SDRG_07171 [Saprolegnia diclina VS20] >gi|530737221|gb|EQC35463.1| hypothetical protein SDRG_07171 [Saprolegnia diclina VS20]) HSP 1 Score: 148.288 bits (373), Expect = 3.175e-43 Identity = 71/107 (66.36%), Postives = 84/107 (78.50%), Query Frame = 0
Query: 34 VVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRK 140
VV LK +LA FI NP+V + L+HPAGPFTIHFWAP+FKW ISLAN+AD + +L+S PQQ+AVT TG+IWSRYS VITP N+NLFSVN FMA TG QL+RK
Sbjct: 7 VVPRLKQAVLAQDFIAKNPKVVSFLEHPAGPFTIHFWAPAFKWCISLANVADMKKNPDLLSTPQQVAVTLTGVIWSRYSLVITPKNWNLFSVNLFMAGTGLTQLYRK 113
BLAST of EWM25375.1 vs. NCBI_GenBank
Match: gi|953493275|emb|CEG44351.1| (mitochondrial pyruvate carrier 2-like [Plasmopara halstedii]) HSP 1 Score: 156.377 bits (394), Expect = 4.993e-43 Identity = 73/133 (54.89%), Postives = 96/133 (72.18%), Query Frame = 0
Query: 24 INCNFSMAL----GVVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRKFTATPNSMSVAS 152
I CNF ++L +V ++ ++L + N+P++ ++L HPAGPFT+HFWAP+FKW IS+ANIAD R E ISV QQ AVTATG+IWSRYS VITP N+NLF+VN FMA TG Q +RKFT P ++ A+
Sbjct: 287 IFCNFHLSLKMLPSIVPRIQQKILEHQIVTNSPKLTSILSHPAGPFTVHFWAPTFKWAISIANIADMRRSPEHISVAQQAAVTATGLIWSRYSLVITPKNWNLFAVNVFMAGTGLTQFYRKFTYNPKKVADAA 419
BLAST of EWM25375.1 vs. NCBI_GenBank
Match: gi|813149451|ref|XP_012200372.1| (hypothetical protein SPRG_05693 [Saprolegnia parasitica CBS 223.65] >gi|641534802|gb|KDO28732.1| hypothetical protein SPRG_05693 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 147.517 bits (371), Expect = 8.488e-43 Identity = 70/107 (65.42%), Postives = 83/107 (77.57%), Query Frame = 0
Query: 34 VVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRK 140
VV LK +LA F+ NP+V + L+HPAGPFTIHFWAP+FKW ISLAN+AD + +L+S PQQ AVT TG+IWSRYS VITP N+NLFSVN FMA TG QL+RK
Sbjct: 7 VVPRLKQAVLAQDFVAKNPKVVSFLEHPAGPFTIHFWAPAFKWCISLANVADMKKNPDLLSTPQQFAVTLTGVIWSRYSLVITPKNWNLFSVNLFMAGTGLTQLYRK 113
BLAST of EWM25375.1 vs. NCBI_GenBank
Match: gi|301102019|ref|XP_002900097.1| (CSH [Phytophthora infestans T30-4] >gi|262102249|gb|EEY60301.1| CSH [Phytophthora infestans T30-4]) HSP 1 Score: 147.902 bits (372), Expect = 8.546e-43 Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 0
Query: 30 MALGVVTALKARLLAVGFIKNNPRVKAVLDHPAGPFTIHFWAPSFKWGISLANIADFNRPAELISVPQQLAVTATGIIWSRYSFVITPVNYNLFSVNAFMAVTGSYQLWRKFTATPNSMSVASSS 154
M +V ++ ++L + N+P++ A++ HPAGPFT+HFWAP+ KW ISLAN+AD R E ISV QQ AVT TG+IWSRYS VITP N+NLF+VN FMA TG Q +RKFT P + A+ S
Sbjct: 26 MLPSIVPRIQQKVLEQQIVANSPKLTAMVSHPAGPFTVHFWAPTIKWAISLANVADMRRSPETISVAQQTAVTGTGVIWSRYSMVITPKNWNLFAVNVFMAGTGLVQFYRKFTYDPEKVEEAAKS 150 The following BLAST results are available for this feature:
BLAST of EWM25375.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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