EWM30151.1, cds524 (CDS) Nannochloropsis gaditana

Overview
NameEWM30151.1
Unique Namecds524
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1315883..1316524 -
Alignment locationCM002455.1:1315263..1315685 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30151.1
Productputative alpha-ketoglutarate-dependent dioxygenase abh6
Orig transcript idgnl|cribi|Naga_100115g12.6576.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1315883..1316524 -
CM002455.1supercontigCM002455.1:1315263..1315685 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR027450AlkB-like
Homology
BLAST of EWM30151.1 vs. NCBI_GenBank
Match: gi|585112807|gb|EWM30151.1| (putative alpha-ketoglutarate-dependent dioxygenase abh6 [Nannochloropsis gaditana])

HSP 1 Score: 734.947 bits (1896), Expect = 0.000e+0
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0
Query:    1 MPALDFQTLLRQERNRVRHEMDQTNNKTHSGSPRAEESEEGHQHHDDDKEDTTCFNFAARMDALLDSVMASHVQSAAPEDGDMDIMATAAAKVVEESEQVRHCLRARLNPEYLTRATTECDLSKHAIRGPPDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVKDQDDAN 354
            MPALDFQTLLRQERNRVRHEMDQTNNKTHSGSPRAEESEEGHQHHDDDKEDTTCFNFAARMDALLDSVMASHVQSAAPEDGDMDIMATAAAKVVEESEQVRHCLRARLNPEYLTRATTECDLSKHAIRGPPDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVKDQDDAN
Sbjct:    1 MPALDFQTLLRQERNRVRHEMDQTNNKTHSGSPRAEESEEGHQHHDDDKEDTTCFNFAARMDALLDSVMASHVQSAAPEDGDMDIMATAAAKVVEESEQVRHCLRARLNPEYLTRATTECDLSKHAIRGPPDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVKDQDDAN 354          
BLAST of EWM30151.1 vs. NCBI_GenBank
Match: gi|298707663|emb|CBJ25980.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 191.43 bits (485), Expect = 1.263e-54
Identity = 109/240 (45.42%), Postives = 142/240 (59.17%), Query Frame = 0
Query:  121 DLSKHAIRGPPDGVFYVPEYISKEMEQEIMEVAHSM-PVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVG--------------GTEGTTPVLNLASL---EGRINVGDRLKRALRLSLTCRRVK 342
            D+ K  +   P  +FYVP++IS   EQ+++E  H+    N+WV LR RRL+C+GG+P E   SF+ E LPPW+  +C +L++ GVF EE  PNHVLLNEY+PGQGIMAH DGPFY  R A +SLG  A+  F  R+    I     E+ P  ++VL   SL+VF  +AY   LH I AV EE VG              G  G  PV+N A+    EG I     L+R LR+SLT RRV+
Sbjct:   77 DMEKMRVGNTPS-IFYVPDFISGADEQQLLERIHAQASSNEWVTLRSRRLKCWGGQPGE---SFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCGGSSGDVGKRGGGGVGGGAPVINGAAAGAPEGTI-----LRRKLRVSLTFRRVR 307          
BLAST of EWM30151.1 vs. NCBI_GenBank
Match: gi|1000753264|ref|XP_015599535.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cephus cinctus])

HSP 1 Score: 159.458 bits (402), Expect = 1.712e-43
Identity = 81/228 (35.53%), Postives = 136/228 (59.65%), Query Frame = 0
Query:  121 DLSKHAIRGPPDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVK 348
            + SK+AIR  P   +Y+P +IS++ E+EI++  ++ P+ +W +L  RRLQ +GG P  + +   +E +P W+ +    +   GVFD   +PNHVL+NEY P QGIMAH+DGP +H  V  IS G   +  F +R+  + +  +++      +  LEPRSL++ + E Y +YLH IA  + +++  T+ +   ++L S + +   G  ++R  RLSLT R V +  ++K
Sbjct:   10 NYSKNAIRQVPPSAYYIPNFISEDEEKEIIKKVNAAPLPKWTQLSHRRLQNWGGIP--HPKGMIAEKIPDWLQKYVDKISNLGVFDVNTLPNHVLINEYLPNQGIMAHSDGPLFHPTVTTISCGSHTVLEFYKRINTDNVEKEAELEF---SFFLEPRSLLILQNELYSNYLHSIAERKSDII--TKCSIKNIDLCSNDYK--EGQAIERETRLSLTIRHVPKTSKLK 228          
BLAST of EWM30151.1 vs. NCBI_GenBank
Match: gi|645010479|ref|XP_008213508.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Nasonia vitripennis] >gi|645010481|ref|XP_008213509.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Nasonia vitripennis])

HSP 1 Score: 156.377 bits (394), Expect = 2.909e-42
Identity = 81/226 (35.84%), Postives = 131/226 (57.96%), Query Frame = 0
Query:  123 SKHAIRGPPDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVK 348
            SK+ ++  P  V Y+P +I+KE E +I +  +S P+ +W +L  RRLQ +GG P  + +   +E +P W+      +    +FD++  PNHVL+NEY PGQGIMAH+DGP +H  V  IS G   +  F +R   +++ +  +E     +++LEPRSL++ + + YHDYLH I     +++   +    + NL       N G+ L+R+ RLSLT R V +  ++K
Sbjct:   11 SKYTVQEVPPLVCYIPNFITKEEESDITQKVNSAPLPKWTQLSHRRLQNWGGIP--HPKGMIAEEIPKWLEVQIDKIAKLNIFDKDKRPNHVLINEYLPGQGIMAHSDGPLFHPIVTTISCGSHTLLEFYKRHETDKVESPKRE----FSLLLEPRSLLILQKDLYHDYLHSIDERSTDLITKCD----IKNLNMCSHNYNEGEILERSTRLSLTIRHVPKTSKLK 226          
BLAST of EWM30151.1 vs. NCBI_GenBank
Match: gi|817202406|ref|XP_012276991.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Orussus abietinus] >gi|817202408|ref|XP_012276992.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Orussus abietinus] >gi|817202410|ref|XP_012276993.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Orussus abietinus] >gi|817202412|ref|XP_012276994.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Orussus abietinus] >gi|817202414|ref|XP_012276996.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Orussus abietinus])

HSP 1 Score: 156.377 bits (394), Expect = 3.374e-42
Identity = 82/227 (36.12%), Postives = 129/227 (56.83%), Query Frame = 0
Query:  122 LSKHAIRGPPDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVK 348
            LS++ ++G      Y+P++IS+  E  I++  +S PV +W +L  RRLQ +GG P  + +   +E +P W+ +    +    VF++ ++PNHVL+NEY PGQGIMAH+DGP +H  V  IS G   +  F +RL  EEI   S+      + +LEPRSL++ + + YH+YLH IA    + +     T  + NL          + ++R  RLSLT R V +  ++K
Sbjct:   19 LSQNIVKGVSPLALYIPDFISEIDETYIVKQINSAPVPKWTQLSHRRLQNWGGIP--HAKGMIAEDMPSWLTKYIDKICDLNVFEQSVLPNHVLINEYLPGQGIMAHSDGPLFHPIVTTISCGSHTLLDFYKRLDTEEIDKTSKIEF---SFLLEPRSLLILQKDLYHNYLHSIAEKTSDTI-----TKEIKNLNLCSTNYTDEEVIQRGTRLSLTIRHVPKTSKLK 235          
BLAST of EWM30151.1 vs. NCBI_GenBank
Match: gi|350407709|ref|XP_003488168.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Bombus impatiens] >gi|815906500|ref|XP_012239053.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Bombus impatiens])

HSP 1 Score: 154.836 bits (390), Expect = 1.022e-41
Identity = 82/218 (37.61%), Postives = 126/218 (57.80%), Query Frame = 0
Query:  131 PDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVK 348
            PD   Y+P +I++E E EI +  ++ P+ +W +L  RRLQ +GG P  + R   +E +P W+ +    +    +F++  +PNHVLLNEY  GQGIMAH+DGP +H  V  IS G   +  F +RL + E    + E     + +LE RSL + +G+ YH+YLH IA  + +VV      + + NL+    + + G+ LKR  RLSLT R V +  ++K
Sbjct:   17 PDLAIYIPNFITQEEEDEITKYVNNTPLPKWTQLTHRRLQNWGGNP--HPRGMIAEEIPSWLQKYVNKVSSCDIFEKNKLPNHVLLNEYLSGQGIMAHSDGPLFHPIVTTISCGSHTLLDFYKRLDSTEQHQPNLEF----SFLLERRSLFILQGDLYHNYLHSIAERDTDVV----SKSVIKNLSICGDKFSEGEILKRGTRLSLTIRHVPKTSKLK 224          
BLAST of EWM30151.1 vs. NCBI_GenBank
Match: gi|915662948|gb|KOC65316.1| (putative alpha-ketoglutarate-dependent dioxygenase ABH6 [Habropoda laboriosa])

HSP 1 Score: 153.295 bits (386), Expect = 3.542e-41
Identity = 82/218 (37.61%), Postives = 127/218 (58.26%), Query Frame = 0
Query:  131 PDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVK 348
            PD   Y+P +I+++ E EI++  +  P+ +W +L  RRLQ +GG P  + +   +E +P W+ +    +    VF++E +PNHVL+NEY PGQGIMAH+DGP +H  V  IS G   +  F +R+     S +  +     + +LE RSL + +G+ YH+YLH IA  + +VV  T+     LN+     R + G  LKR +RLSLT R V +  ++K
Sbjct:   18 PDLAIYIPNFITQKEEDEIVKHVNKAPLPKWTQLSHRRLQNWGGIP--HPKGMIAEEIPGWLQKYINQVSSYNVFEKEKLPNHVLINEYLPGQGIMAHSDGPLFHPIVTTISCGSHTLLDFYKRV----NSTEQHQPDLKFSFLLERRSLFILQGDLYHNYLHSIAETDTDVV--TKSVIKNLNICG--ERFSEGQTLKRGIRLSLTIRHVPKTSKLK 225          
BLAST of EWM30151.1 vs. NCBI_GenBank
Match: gi|1059870524|ref|XP_017790107.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Habropoda laboriosa])

HSP 1 Score: 153.295 bits (386), Expect = 3.555e-41
Identity = 82/218 (37.61%), Postives = 127/218 (58.26%), Query Frame = 0
Query:  131 PDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVK 348
            PD   Y+P +I+++ E EI++  +  P+ +W +L  RRLQ +GG P  + +   +E +P W+ +    +    VF++E +PNHVL+NEY PGQGIMAH+DGP +H  V  IS G   +  F +R+     S +  +     + +LE RSL + +G+ YH+YLH IA  + +VV  T+     LN+     R + G  LKR +RLSLT R V +  ++K
Sbjct:   17 PDLAIYIPNFITQKEEDEIVKHVNKAPLPKWTQLSHRRLQNWGGIP--HPKGMIAEEIPGWLQKYINQVSSYNVFEKEKLPNHVLINEYLPGQGIMAHSDGPLFHPIVTTISCGSHTLLDFYKRV----NSTEQHQPDLKFSFLLERRSLFILQGDLYHNYLHSIAETDTDVV--TKSVIKNLNICG--ERFSEGQTLKRGIRLSLTIRHVPKTSKLK 224          
BLAST of EWM30151.1 vs. NCBI_GenBank
Match: gi|1153825582|ref|XP_020289096.1| (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Pseudomyrmex gracilis])

HSP 1 Score: 153.295 bits (386), Expect = 3.776e-41
Identity = 82/218 (37.61%), Postives = 129/218 (59.17%), Query Frame = 0
Query:  131 PDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVK 348
            PD   Y+P +I++E E++I++  +++P  +W +L  RRLQ +GG P  + +   +E +P W+ +    +     F+  ++PNHVL+NEY PGQGIMAH+DGP ++  V  IS G      F ++L     S + Q+S    +++LEPRSL+V + + YH+YLH IA  E +V   TE T  + NL     +   G  +KR +RLSLT R V +  ++K
Sbjct:   18 PDTACYIPNFITEEEEKQIIKHVNNVPQPKWTQLSHRRLQNWGGIP--HPKGMIAEEIPTWLQKYIDKVKALNAFETGVLPNHVLINEYLPGQGIMAHSDGPLFYPVVTTISCGSHTFLDFYKKL----DSTEQQQSKFEFSLLLEPRSLLVLQKDLYHNYLHSIA--ERDVDDVTEST--IKNLHMCANKFVEGQTIKRDVRLSLTIRHVPKTSKLK 225          
BLAST of EWM30151.1 vs. NCBI_GenBank
Match: gi|925678816|gb|KOX75815.1| (putative alpha-ketoglutarate-dependent dioxygenase ABH6 [Melipona quadrifasciata])

HSP 1 Score: 152.525 bits (384), Expect = 6.228e-41
Identity = 78/218 (35.78%), Postives = 125/218 (57.34%), Query Frame = 0
Query:  131 PDGVFYVPEYISKEMEQEIMEVAHSMPVNQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESVPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLASLEGRINVGDRLKRALRLSLTCRRVKEEGEVK 348
            PD   Y+P +I++E E EI++  +  PV +W +L  RRLQ +GG P  + +   +E +P W+ +    +    +F++  +PNHVL+NEY PGQGIMAH+DGP +H  V  IS G   +  F + L + E+   S       + +LE RSL + +G  YH+Y+H IA  + +V+  +     + NL+    + + G+ LKR  R+SLT R V +  ++K
Sbjct:   17 PDLAIYIPNFITQEEEDEIVKYVNDAPVPKWTQLSHRRLQNWGGIP--HSKGMIAEEIPGWLQKYINKVSSCDIFEKNKLPNHVLINEYLPGQGIMAHSDGPLFHPIVTTISCGSHTLLDFYKSLDSTEVQHQSNLEF---SFLLERRSLFILQGNLYHNYMHSIAEKDTDVISKSM----LKNLSICGEKFSEGETLKRGTRISLTIRHVPKTSKLK 225          
The following BLAST results are available for this feature:
BLAST of EWM30151.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112807|gb|EWM30151.1|0.000e+0100.00putative alpha-ketoglutarate-dependent dioxygenase... [more]
gi|298707663|emb|CBJ25980.1|1.263e-5445.42conserved unknown protein [Ectocarpus siliculosus][more]
gi|1000753264|ref|XP_015599535.1|1.712e-4335.53PREDICTED: alpha-ketoglutarate-dependent dioxygena... [more]
gi|645010479|ref|XP_008213508.1|2.909e-4235.84PREDICTED: alpha-ketoglutarate-dependent dioxygena... [more]
gi|817202406|ref|XP_012276991.1|3.374e-4236.12PREDICTED: alpha-ketoglutarate-dependent dioxygena... [more]
gi|350407709|ref|XP_003488168.1|1.022e-4137.61PREDICTED: alpha-ketoglutarate-dependent dioxygena... [more]
gi|915662948|gb|KOC65316.1|3.542e-4137.61putative alpha-ketoglutarate-dependent dioxygenase... [more]
gi|1059870524|ref|XP_017790107.1|3.555e-4137.61PREDICTED: alpha-ketoglutarate-dependent dioxygena... [more]
gi|1153825582|ref|XP_020289096.1|3.776e-4137.61alpha-ketoglutarate-dependent dioxygenase alkB hom... [more]
gi|925678816|gb|KOX75815.1|6.228e-4135.78putative alpha-ketoglutarate-dependent dioxygenase... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna524rna524Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications