EWM25453.1, cds5220 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25453.1 vs. NCBI_GenBank
Match: gi|585107214|gb|EWM25453.1| (hypothetical protein Naga_100005g20 [Nannochloropsis gaditana]) HSP 1 Score: 572.778 bits (1475), Expect = 0.000e+0 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0 Query: 1 MFRKMTLFMAVAAASLAFAGADASVSTEPETRTPKPMLKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQDAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVDFDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAEDRVWATSVWQQRRMLRASEADN 279 MFRKMTLFMAVAAASLAFAGADASVSTEPETRTPKPMLKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQDAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVDFDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAEDRVWATSVWQQRRMLRASEADN Sbjct: 1 MFRKMTLFMAVAAASLAFAGADASVSTEPETRTPKPMLKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQDAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVDFDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAEDRVWATSVWQQRRMLRASEADN 279
BLAST of EWM25453.1 vs. NCBI_GenBank
Match: gi|585107121|gb|EWM25360.1| (hypothetical protein Naga_100005g21 [Nannochloropsis gaditana]) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 278/279 (99.64%), Postives = 278/279 (99.64%), Query Frame = 0 Query: 1 MFRKMTLFMAVAAASLAFAGADASVSTEPETRTPKPMLKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQDAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVDFDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAEDRVWATSVWQQRRMLRASEADN 279 MFRKMTLFMAVAAASLAFAGADASVSTEPETRTPKPMLKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQDAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVDFDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAEDRVWATSVWQQRRMLRASEAD Sbjct: 1 MFRKMTLFMAVAAASLAFAGADASVSTEPETRTPKPMLKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQDAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVDFDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAEDRVWATSVWQQRRMLRASEADK 279
BLAST of EWM25453.1 vs. NCBI_GenBank
Match: gi|585112805|gb|EWM30149.1| (hypothetical protein Naga_100115g7 [Nannochloropsis gaditana]) HSP 1 Score: 136.732 bits (343), Expect = 8.695e-34 Identity = 80/260 (30.77%), Postives = 142/260 (54.62%), Query Frame = 0 Query: 38 LKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQ-DAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVD----FDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAED-------------RVWATSVWQQRRMLRASEADN 279 ++V+C P++VA+ PF VN++Y + RP+ +HVD+LNA T + AG + AG+V+ I +P + PF W ++ P+ E +PNMLA T F A L V CAP ++ P + + D+V ++ P+ G++ V+V+YNL+ ++ +S L+R NT+++S + A G++ +++ + VP DA E VY++ L P G ++ +R+AED +V + W +RR+ + ++ Sbjct: 157 IEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAI-LSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDA-PKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRLNSGAGGED 414
BLAST of EWM25453.1 vs. NCBI_GenBank
Match: gi|585106376|gb|EWM24789.1| (hypothetical protein Naga_100912g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 82.4185 bits (202), Expect = 2.540e-14 Identity = 58/198 (29.29%), Postives = 89/198 (44.95%), Query Frame = 0 Query: 8 FMAVAAASLAFAGADASVSTEPET-----RTPKPMLKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRI-VVPQDAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVDFDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATL 199 F+ A S A V+ PE RTP + VLC P++V PF VNL + RPM + L+ DT E+ G V V G V+ R + P P K+ A+++P+ E PN + T LG + + PC P + + + ++V + D P G K + + YNL+P+ +AT+ Sbjct: 117 FLTPAGGSF-----QARVANAPELEVGIDRTPVNAIGVLCQPRAVQPGQPFVVNLWFTQTHPRPMDLIAVALDGDTKEYYGGFQVPVKAQQGHVSGRFDLRPAPLTAPLKFKAWLSPRGEVAPNYVTYTMLNIPLGPETVQPCNPDPDNEWTETGIPPANWVELHDVPKVLTPGEKANIRLVYNLVPESQKAATNATV 309 The following BLAST results are available for this feature:
BLAST of EWM25453.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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