EWM25413.1, cds5216 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25413.1 vs. NCBI_GenBank
Match: gi|585107174|gb|EWM25413.1| (cyclophilin [Nannochloropsis gaditana]) HSP 1 Score: 402.519 bits (1033), Expect = 4.686e-142 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 Query: 1 MAFAKSLAFMLGMATFALSQADDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGELK 197 MAFAKSLAFMLGMATFALSQADDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGELK Sbjct: 1 MAFAKSLAFMLGMATFALSQADDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGELK 197
BLAST of EWM25413.1 vs. NCBI_GenBank
Match: gi|210063564|gb|ACJ06541.1| (cyclophilin [Camellia oleifera]) HSP 1 Score: 289.656 bits (740), Expect = 3.328e-97 Identity = 144/200 (72.00%), Postives = 164/200 (82.00%), Query Frame = 0 Query: 2 AFAKSLAFMLGM-ATFALSQA----DDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGEL 196 +F+ +L + L + AT AL+QA +DL +VTHKV+FD+ +A KPAGRIV GL+G VP+T ENFRALCTGEKG+G +G+PLHYKGSKFHR+IPSFMLQGGDFT +G GGESIYGG FADENFKLKHT PGLLSMANAG DTNGSQFFITTV TSWLDGRHVVFG+VL GMDVV IE G+ GT K V IADSGEL Sbjct: 6 SFSLALVWTLVLFATLALTQAKKSKEDLKEVTHKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMLQGGDFTLGDGRGGESIYGGEFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGNQSGTPKSNVQIADSGEL 205
BLAST of EWM25413.1 vs. NCBI_GenBank
Match: gi|703130515|ref|XP_010104628.1| (Peptidyl-prolyl cis-trans isomerase CYP19-4 [Morus notabilis] >gi|587913631|gb|EXC01434.1| Peptidyl-prolyl cis-trans isomerase CYP19-4 [Morus notabilis]) HSP 1 Score: 289.656 bits (740), Expect = 3.617e-97 Identity = 143/199 (71.86%), Postives = 162/199 (81.41%), Query Frame = 0 Query: 2 AFAKSLAFMLGMATFALSQA----DDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGEL 196 +F F+LG T AL+QA +DL +VTHKV+FD+ + KPAGRIV GL+G TVP+T ENFRALCTGEKGIG +G+PLHYKGS+FHR+IPSFMLQGGDFT +G GGESIYG +FADENFKLKHT PGLLSMANAG+DTNGSQFFITTV TSWLDGRHVVFG+VL GMDVV IE G GT K V+IADSGEL Sbjct: 6 SFLVCTLFLLG--TLALTQAKKSKEDLKEVTHKVYFDVEIDGKPAGRIVMGLFGKTVPKTAENFRALCTGEKGIGKSGKPLHYKGSQFHRIIPSFMLQGGDFTLGDGRGGESIYGEKFADENFKLKHTGPGLLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGRQSGTPKSKVVIADSGEL 202
BLAST of EWM25413.1 vs. NCBI_GenBank
Match: gi|1040841020|ref|XP_017233879.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Daucus carota subsp. sativus] >gi|1021048761|gb|KZN06541.1| hypothetical protein DCAR_007378 [Daucus carota subsp. sativus]) HSP 1 Score: 287.345 bits (734), Expect = 3.046e-96 Identity = 143/200 (71.50%), Postives = 161/200 (80.50%), Query Frame = 0 Query: 3 FAKSLAFMLGM-ATFALSQAD-----DLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGEL 196 A +L F L + T ALSQA DL +VT+KV+FD+ +A KPAGRIV GL+G TVP+T ENFRALCTGEKGIG +G+PLHYKGS FHR+IPSFMLQGGDFT +G GGESIYG +FADENFK+KHT PGLLSMANAG+DTNGSQFFITTV TSWLDGRHVVFG+VL GMDVV +E G GT K VIIADSGEL Sbjct: 7 IATTLLFSLVLLGTLALSQAKKKSGADLKEVTNKVYFDVEIAGKPAGRIVMGLFGKTVPKTAENFRALCTGEKGIGKSGKPLHYKGSAFHRIIPSFMLQGGDFTLGDGRGGESIYGEKFADENFKIKHTGPGLLSMANAGKDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGQQSGTPKSKVIIADSGEL 206
BLAST of EWM25413.1 vs. NCBI_GenBank
Match: gi|502129296|ref|XP_004500254.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Cicer arietinum]) HSP 1 Score: 286.574 bits (732), Expect = 4.445e-96 Identity = 139/186 (74.73%), Postives = 153/186 (82.26%), Query Frame = 0 Query: 15 TFALSQA----DDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGEL 196 T AL QA +DL +VTHKV+FD+ + K AGR+V GLYG TVP+T ENFRALCTGEKG G G+PLHYKGS FHR+IPSFM+QGGDFTH NGMGGESIYG +FADENFKLKHT PGLLSMANAG DTNGSQFFITTV TSWLDGRHVVFG+VL GMDVV IE G+ GT K V+IADSGEL Sbjct: 17 TLALIQAKKSKEDLKEVTHKVYFDVEIDGKAAGRVVIGLYGKTVPKTAENFRALCTGEKGTGKNGKPLHYKGSSFHRIIPSFMIQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGNQSGTPKSKVVIADSGEL 202
BLAST of EWM25413.1 vs. NCBI_GenBank
Match: gi|567210292|ref|XP_006410046.1| (hypothetical protein EUTSA_v10016970mg [Eutrema salsugineum] >gi|557111215|gb|ESQ51499.1| hypothetical protein EUTSA_v10016970mg [Eutrema salsugineum]) HSP 1 Score: 290.812 bits (743), Expect = 4.749e-96 Identity = 141/199 (70.85%), Postives = 162/199 (81.41%), Query Frame = 0 Query: 1 MAFAKS--LAFMLGMATFALSQA-DDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGEL 196 MA A S L +L A A QA +DL ++THKV+FD+ + K AGR+V GL+G TVP+T ENFRALCTGEKG+G +G+PLHYKGSKFHR+IPSFM+QGGDFTH NGMGGESIYG +FADENFKLKHT PGLLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG+V++GMDVV IE G GT K V+IADSGEL Sbjct: 113 MAKASSILLGTLLLFAALAFIQAKEDLKEITHKVYFDVEIEGKDAGRVVIGLFGKTVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGLLSMANSGEDTNGSQFFITTVKTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 311
BLAST of EWM25413.1 vs. NCBI_GenBank
Match: gi|595829673|ref|XP_007205916.1| (peptidyl-prolyl cis-trans isomerase CYP19-4 [Prunus persica] >gi|1139765150|gb|ONH99912.1| hypothetical protein PRUPE_6G057200 [Prunus persica]) HSP 1 Score: 286.189 bits (731), Expect = 6.040e-96 Identity = 141/201 (70.15%), Postives = 164/201 (81.59%), Query Frame = 0 Query: 4 AKSLAFMLG----MATFALSQA----DDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGEL 196 A++ +F+L T AL QA +DL +VTHKVFFD+ +A KPAGR+V GL+G TVP+T ENFRALCTGEKGIG +G+PLH+KGSKFHR+IPSFM+QGGDFT +G GGESIYG +FADENFKLKHT PGLLSMANAG DTNGSQFFITTV T+WLDGRHVVFG+VL GMDVV IE G+ +GT K V+IADSGEL Sbjct: 2 ARTTSFLLCTLVLFGTLALIQAKKSKEDLKEVTHKVFFDVEIAGKPAGRVVIGLFGKTVPKTAENFRALCTGEKGIGKSGKPLHFKGSKFHRIIPSFMIQGGDFTLGDGRGGESIYGEKFADENFKLKHTGPGLLSMANAGSDTNGSQFFITTVTTNWLDGRHVVFGKVLSGMDVVYKIEAEGNQNGTPKSKVVIADSGEL 202
BLAST of EWM25413.1 vs. NCBI_GenBank
Match: gi|388501820|gb|AFK38976.1| (unknown [Lotus japonicus]) HSP 1 Score: 285.804 bits (730), Expect = 8.960e-96 Identity = 141/194 (72.68%), Postives = 156/194 (80.41%), Query Frame = 0 Query: 7 LAFMLGMATFALSQA----DDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGEL 196 L +L AT AL QA +DL +VTHKVFFD+ + K AGRIV GLYG TVP T ENFRALCTGEKGIG +G+PLH+KGS FHR+IPSFM+QGGDFT NGMGGESIYG +F DENFKLKHT PGLLSMANAG DTNGSQFFITTV TSWLDGRHVVFG+VL GMDVV +E G+ GT K V+IADSGEL Sbjct: 9 LCTVLLFATLALIQAKKSKEDLKEVTHKVFFDVEIDGKAAGRIVMGLYGKTVPETAENFRALCTGEKGIGKSGKPLHFKGSSFHRIIPSFMIQGGDFTQGNGMGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGEL 202
BLAST of EWM25413.1 vs. NCBI_GenBank
Match: gi|1117535137|ref|XP_019447015.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Lupinus angustifolius] >gi|1102710733|gb|OIW09540.1| hypothetical protein TanjilG_30859 [Lupinus angustifolius]) HSP 1 Score: 285.804 bits (730), Expect = 9.569e-96 Identity = 140/194 (72.16%), Postives = 156/194 (80.41%), Query Frame = 0 Query: 7 LAFMLGMATFALSQA----DDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGEL 196 L +L + T AL QA +DL +VT+KV+FD+ + K AGRIV GLYG TVP+T ENFRALCTGEKG G +G+PLHYKGS FHR+IPSFMLQGGDFTH NGMGGESIYG +F DENFKLKHT PGLLSMANAG DTNGSQFFITTV TSWLDGRHVVFG+VL GMDVV IE G+ GT K V+I DSGEL Sbjct: 9 LCAILLIGTLALVQAKKSKEDLKEVTNKVYFDVEINGKSAGRIVIGLYGKTVPKTAENFRALCTGEKGTGKSGKPLHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFPDENFKLKHTGPGLLSMANAGSDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGNQSGTPKSKVVIVDSGEL 202
BLAST of EWM25413.1 vs. NCBI_GenBank
Match: gi|727457037|ref|XP_010510426.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Camelina sativa]) HSP 1 Score: 286.96 bits (733), Expect = 1.024e-95 Identity = 137/199 (68.84%), Postives = 160/199 (80.40%), Query Frame = 0 Query: 1 MAFAKSLAF---MLGMATFALSQADDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGEL 196 MA A S+ F +L A ++ +DL ++THKV+FD+ + K AGR+V GL+G VP+T ENFRALCTGEKG+G +G+PLHYKGSKFHR+IPSFM+QGGDFTH NGMGGESIYG +FADENFKLKHT PGLLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG+V +GMDVV IE G GT K V+IADSGEL Sbjct: 32 MARASSILFGTLLLLGAVASIEAKEDLKEITHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGLLSMANSGEDTNGSQFFITTVKTSWLDGRHVVFGKVEQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 230 The following BLAST results are available for this feature:
BLAST of EWM25413.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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