EWM30149.1, cds520 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30149.1 vs. NCBI_GenBank
Match: gi|585112805|gb|EWM30149.1| (hypothetical protein Naga_100115g7 [Nannochloropsis gaditana]) HSP 1 Score: 892.493 bits (2305), Expect = 0.000e+0 Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0 Query: 1 MIIFFFAITCRTFRLKHRPKRKGPSCPNTARQHSAQYILLSPRGIPPPAILMSYMLCAFFLFHLPTESSTTRIKNEKTLSMQLHRTLIGLAALVPFLALTSAEVEQFEIFPGQATWDSSIELPGMSSKAATRGRTDGEPTTAEGHCCGMKGLGGATIEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAILSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDAPKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRLNSGAGGEDGRTRVALHVFYCFH 428 MIIFFFAITCRTFRLKHRPKRKGPSCPNTARQHSAQYILLSPRGIPPPAILMSYMLCAFFLFHLPTESSTTRIKNEKTLSMQLHRTLIGLAALVPFLALTSAEVEQFEIFPGQATWDSSIELPGMSSKAATRGRTDGEPTTAEGHCCGMKGLGGATIEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAILSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDAPKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRLNSGAGGEDGRTRVALHVFYCFH Sbjct: 1 MIIFFFAITCRTFRLKHRPKRKGPSCPNTARQHSAQYILLSPRGIPPPAILMSYMLCAFFLFHLPTESSTTRIKNEKTLSMQLHRTLIGLAALVPFLALTSAEVEQFEIFPGQATWDSSIELPGMSSKAATRGRTDGEPTTAEGHCCGMKGLGGATIEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAILSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDAPKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRLNSGAGGEDGRTRVALHVFYCFH 428
BLAST of EWM30149.1 vs. NCBI_GenBank
Match: gi|585107214|gb|EWM25453.1| (hypothetical protein Naga_100005g20 [Nannochloropsis gaditana]) HSP 1 Score: 136.732 bits (343), Expect = 1.390e-33 Identity = 80/260 (30.77%), Postives = 142/260 (54.62%), Query Frame = 0 Query: 157 IEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAI-LSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDA-PKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRLNSGAGGED 414 ++V+C P++VA+ PF VN++Y + RP+ +HVD+LNA T + AG + AG+V+ I +P + PF W ++ P+ E +PNMLA T F A L V CAP ++ P + + D+V ++ P+ G++ V+V+YNL+ ++ +S L+R NT+++S + A G++ +++ + VP DA E VY++ L P G ++ +R+AED +V + W +RR+ + ++ Sbjct: 38 LKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQ-DAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVD----FDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAED-------------RVWATSVWQQRRMLRASEADN 279
BLAST of EWM30149.1 vs. NCBI_GenBank
Match: gi|585107121|gb|EWM25360.1| (hypothetical protein Naga_100005g21 [Nannochloropsis gaditana]) HSP 1 Score: 136.346 bits (342), Expect = 1.607e-33 Identity = 80/252 (31.75%), Postives = 139/252 (55.16%), Query Frame = 0 Query: 157 IEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAI-LSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDA-PKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRL 406 ++V+C P++VA+ PF VN++Y + RP+ +HVD+LNA T + AG + AG+V+ I +P + PF W ++ P+ E +PNMLA T F A L V CAP ++ P + + D+V ++ P+ G++ V+V+YNL+ ++ +S L+R NT+++S + A G++ +++ + VP DA E VY++ L P G ++ +R+AED +V + W +RR+ Sbjct: 38 LKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQ-DAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVD----FDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAED-------------RVWATSVWQQRRM 271
BLAST of EWM30149.1 vs. NCBI_GenBank
Match: gi|585106376|gb|EWM24789.1| (hypothetical protein Naga_100912g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 79.7221 bits (195), Expect = 1.010e-12 Identity = 59/189 (31.22%), Postives = 85/189 (44.97%), Query Frame = 0 Query: 157 IEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPE--LANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLV-----GAAKAILSVAL----MRKGPNTIISSF 334 I V+C P V G+PF VN+ +T RP+D+ L+ TK +Y G Q G VS + + P +K +L+PRGE PN + T L C P DP + ++V L VP VLTPG +A + + YNLV A A +S+ + +R P+ +S F Sbjct: 147 IGVLCQPRAVQPGQPFVVNLWFTQTHPRPMDLIAVALDGDTKEYYGGFQVPVKAQQGHVSGRFDLRPAPLTAPLKFKAWLSPRGEVAPNYVTYTMLNIPLGPETVQPCNP------DPDNEWTETGIPPANWVELHDVPKVLTPGEKANIRLVYNLVPESQKAATNATVSLMMWDWKVRLPPSFFLSVF 329 The following BLAST results are available for this feature:
BLAST of EWM30149.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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