EWM30149.1, cds520 (CDS) Nannochloropsis gaditana

Overview
NameEWM30149.1
Unique Namecds520
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1308017..1308779 +
Alignment locationCM002455.1:1308982..1309359 +
Alignment locationCM002455.1:1309409..1309554 +

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Properties
Property NameValue
Protein idEWM30149.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100115g7.6574.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1308017..1308779 +
CM002455.1supercontigCM002455.1:1308982..1309359 +
CM002455.1supercontigCM002455.1:1309409..1309554 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM30149.1 vs. NCBI_GenBank
Match: gi|585112805|gb|EWM30149.1| (hypothetical protein Naga_100115g7 [Nannochloropsis gaditana])

HSP 1 Score: 892.493 bits (2305), Expect = 0.000e+0
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0
Query:    1 MIIFFFAITCRTFRLKHRPKRKGPSCPNTARQHSAQYILLSPRGIPPPAILMSYMLCAFFLFHLPTESSTTRIKNEKTLSMQLHRTLIGLAALVPFLALTSAEVEQFEIFPGQATWDSSIELPGMSSKAATRGRTDGEPTTAEGHCCGMKGLGGATIEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAILSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDAPKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRLNSGAGGEDGRTRVALHVFYCFH 428
            MIIFFFAITCRTFRLKHRPKRKGPSCPNTARQHSAQYILLSPRGIPPPAILMSYMLCAFFLFHLPTESSTTRIKNEKTLSMQLHRTLIGLAALVPFLALTSAEVEQFEIFPGQATWDSSIELPGMSSKAATRGRTDGEPTTAEGHCCGMKGLGGATIEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAILSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDAPKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRLNSGAGGEDGRTRVALHVFYCFH
Sbjct:    1 MIIFFFAITCRTFRLKHRPKRKGPSCPNTARQHSAQYILLSPRGIPPPAILMSYMLCAFFLFHLPTESSTTRIKNEKTLSMQLHRTLIGLAALVPFLALTSAEVEQFEIFPGQATWDSSIELPGMSSKAATRGRTDGEPTTAEGHCCGMKGLGGATIEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAILSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDAPKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRLNSGAGGEDGRTRVALHVFYCFH 428          
BLAST of EWM30149.1 vs. NCBI_GenBank
Match: gi|585107214|gb|EWM25453.1| (hypothetical protein Naga_100005g20 [Nannochloropsis gaditana])

HSP 1 Score: 136.732 bits (343), Expect = 1.390e-33
Identity = 80/260 (30.77%), Postives = 142/260 (54.62%), Query Frame = 0
Query:  157 IEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAI-LSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDA-PKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRLNSGAGGED 414
            ++V+C P++VA+  PF VN++Y +   RP+ +HVD+LNA T  + AG   +    AG+V+  I +P    + PF W  ++ P+ E +PNMLA T F A L   V   CAP ++    P +  +     D+V ++  P+    G++  V+V+YNL+    ++ +S  L+R   NT+++S  + A  G++ +++ + VP DA   E VY++  L P G ++ +R+AED             +V   + W +RR+   +  ++
Sbjct:   38 LKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQ-DAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVD----FDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAED-------------RVWATSVWQQRRMLRASEADN 279          
BLAST of EWM30149.1 vs. NCBI_GenBank
Match: gi|585107121|gb|EWM25360.1| (hypothetical protein Naga_100005g21 [Nannochloropsis gaditana])

HSP 1 Score: 136.346 bits (342), Expect = 1.607e-33
Identity = 80/252 (31.75%), Postives = 139/252 (55.16%), Query Frame = 0
Query:  157 IEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAI-LSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDA-PKEAVYIVVTLTPDGASWEDRLAEDQLLGANQGESVQAKVRCENCWVRRRL 406
            ++V+C P++VA+  PF VN++Y +   RP+ +HVD+LNA T  + AG   +    AG+V+  I +P    + PF W  ++ P+ E +PNMLA T F A L   V   CAP ++    P +  +     D+V ++  P+    G++  V+V+YNL+    ++ +S  L+R   NT+++S  + A  G++ +++ + VP DA   E VY++  L P G ++ +R+AED             +V   + W +RR+
Sbjct:   38 LKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQ-DAKTPFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVD----FDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAED-------------RVWATSVWQQRRM 271          
BLAST of EWM30149.1 vs. NCBI_GenBank
Match: gi|585106376|gb|EWM24789.1| (hypothetical protein Naga_100912g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 79.7221 bits (195), Expect = 1.010e-12
Identity = 59/189 (31.22%), Postives = 85/189 (44.97%), Query Frame = 0
Query:  157 IEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPE--LANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLV-----GAAKAILSVAL----MRKGPNTIISSF 334
            I V+C P  V  G+PF VN+ +T    RP+D+    L+  TK +Y G       Q G VS    +    +  P  +K +L+PRGE  PN +  T     L       C P      DP        +   ++V L  VP VLTPG +A + + YNLV      A  A +S+ +    +R  P+  +S F
Sbjct:  147 IGVLCQPRAVQPGQPFVVNLWFTQTHPRPMDLIAVALDGDTKEYYGGFQVPVKAQQGHVSGRFDLRPAPLTAPLKFKAWLSPRGEVAPNYVTYTMLNIPLGPETVQPCNP------DPDNEWTETGIPPANWVELHDVPKVLTPGEKANIRLVYNLVPESQKAATNATVSLMMWDWKVRLPPSFFLSVF 329          
The following BLAST results are available for this feature:
BLAST of EWM30149.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 4
Match NameE-valueIdentityDescription
gi|585112805|gb|EWM30149.1|0.000e+0100.00hypothetical protein Naga_100115g7 [Nannochloropsi... [more]
gi|585107214|gb|EWM25453.1|1.390e-3330.77hypothetical protein Naga_100005g20 [Nannochlorops... [more]
gi|585107121|gb|EWM25360.1|1.607e-3331.75hypothetical protein Naga_100005g21 [Nannochlorops... [more]
gi|585106376|gb|EWM24789.1|1.010e-1231.22hypothetical protein Naga_100912g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna520rna520Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications