EWM30619.1, cds52 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30619.1 vs. NCBI_GenBank
Match: gi|585113295|gb|EWM30619.1| (pyridoxamine 5 -phosphate oxidase- fmn-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 639.802 bits (1649), Expect = 0.000e+0 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
Query: 1 MPVHFLRNPLLCSVSHTATTLLCALPVLRATFVAPVRNIAFLHSPFNRFPSSLTPMATMKAAEIGEGGLADIGQARSSSPTASNADDASHGARGEKKPKWVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLASAPPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP 309
MPVHFLRNPLLCSVSHTATTLLCALPVLRATFVAPVRNIAFLHSPFNRFPSSLTPMATMKAAEIGEGGLADIGQARSSSPTASNADDASHGARGEKKPKWVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLASAPPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP
Sbjct: 1 MPVHFLRNPLLCSVSHTATTLLCALPVLRATFVAPVRNIAFLHSPFNRFPSSLTPMATMKAAEIGEGGLADIGQARSSSPTASNADDASHGARGEKKPKWVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLASAPPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP 309
BLAST of EWM30619.1 vs. NCBI_GenBank
Match: gi|585102819|gb|EWM22322.1| (pyridoxamine 5 -phosphate oxidase- fmn-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 157.532 bits (397), Expect = 2.784e-42 Identity = 120/346 (34.68%), Postives = 166/346 (47.98%), Query Frame = 0
Query: 1 MPVHFL--RNPLLCSVSHTATTLLCALPVLRATFVAPVRNIAFLHSPFNRFPS-SLTPMATMKAAEIGEGGLADIGQARSSSPTASNADDASHGARGEKKPKWVLDLGISMARNNRDAHSRYIQLATVG---FGSDDSS----------VIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLAS--------APPETFCLLLVRVSEVDHLDLKASPQRRTVHA-------------RRKGQKEGEEGDWEVTKVNP 309
MP+H + R+P+ S LC +L AT ++ F PF + S SL MA GL DIG + + ++ D +P WV L ++ N D HSR++QLAT+ F +++ +++P VR VVFRGF N ++ K+ITD+RSEKI ++ +P EI+WYF++TREQ+RL GR ++VT D L AR QW LS++AR QF WP P L+QD S D L + PPETF LLL VDHL L+ +PQ RTVH +G+ E W +VNP
Sbjct: 1 MPIHLIYSRHPVRGSG-------LCKFFLLVATLISGT-TAGF---PFCCWSSKSLILMAAATPTAGSNEGLRDIGG--TCVVSKNDQSDPRETVASASQPPWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLN----ENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPG----LNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQWSINKQPDGIEIRGEGVDESDAWAARRVNP 325
BLAST of EWM30619.1 vs. NCBI_GenBank
Match: gi|662038185|ref|WP_030006568.1| (pyridoxamine 5'-phosphate oxidase [Synechococcus sp. NKBG042902]) HSP 1 Score: 151.754 bits (382), Expect = 2.029e-41 Identity = 92/212 (43.40%), Postives = 118/212 (55.66%), Query Frame = 0
Query: 100 WVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLAS--APPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP 309
W L ++ RN H R+ QLATV + KP RTVVFRGF G + LKIITD RSEKI L PDAEIAWYF KTREQ+R G++++VT S L AR+Q W LS++ARAQFLWP P D+ + D PT + P F LLL +V++VDHL+L+ +PQ R ++ +G W+ VNP
Sbjct: 10 WRSPLARALHRNKSQPHHRFFQLATV------TPTGKPRNRTVVFRGFLEGSND-----LKIITDQRSEKINHLATCPDAEIAWYFTKTREQFRFSGQIKLVTAASSSSRLNRARQQTWQALSDAARAQFLWPQPG-----DRRSENLA-DFQPTAVNDQEPVSNFVLLLFQVTKVDHLELRGNPQNRFLY------DLTADGTWQQKTVNP 198
BLAST of EWM30619.1 vs. NCBI_GenBank
Match: gi|738535102|ref|WP_036483508.1| (pyridoxamine 5'-phosphate oxidase [Myxosarcina sp. GI1]) HSP 1 Score: 150.599 bits (379), Expect = 3.885e-41 Identity = 87/213 (40.85%), Postives = 119/213 (55.87%), Query Frame = 0
Query: 100 WVLDLGISMARNNRDAHSRYIQLATV---GFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLASAPPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP 309
W L ++ RN H RY+QLAT+ G+ P RTVVFRGF + + LKI+ D+RS+KI + P +E WYF KTREQ+RL G + +VT S D+ LQ AR+ W+NLSE+AR+QF WP HP D F+ D+P + P FCLLL+ ++VDHL+L+ PQ RT++ +G W + VNP
Sbjct: 6 WRSLLARALHRNRSQPHCRYLQLATITPEGY---------PANRTVVFRGFLDNTND-----LKIVVDSRSKKIRDIQHLPHSEGCWYFTKTREQFRLTGSLNLVTAESTDKELQTARQTTWHNLSEAARSQFSWP---HPEKQRADKEAFTVDVPD--ENIPLNNFCLLLLIPTKVDHLELRGEPQSRTLYYL-------HDGSWSIRAVNP 192
BLAST of EWM30619.1 vs. NCBI_GenBank
Match: gi|1047319089|ref|WP_065715256.1| (pyridoxamine 5'-phosphate oxidase [Synechococcus sp. PCC 7003] >gi|1046567143|gb|ANV85582.1| pyridoxamine 5'-phosphate oxidase [Synechococcus sp. PCC 7003]) HSP 1 Score: 150.214 bits (378), Expect = 6.935e-41 Identity = 90/210 (42.86%), Postives = 119/210 (56.67%), Query Frame = 0
Query: 100 WVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLASAPPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP 309
W L ++ RN H R+ QLATV + V P RTVVFRGF + + + LKIITD RSEKI L+ PDAEIAWYF KTREQ+R G++ +VT S L+ AR+Q W LS++ARAQF WP P ++ + F PD P F LLL +V++VDHL+L+ +PQ R ++ R +G W+ VNP
Sbjct: 8 WRSPLARALHRNKSQPHHRFFQLATV------TPVGTPSNRTVVFRGFLD-----ESNDLKIITDQRSEKINHLSACPDAEIAWYFTKTREQFRFSGQITMVTAQSSSSRLKPARQQTWQALSDAARAQFFWPQPG--DRRSENLADFHPDA--VNDQEPVSNFVLLLFQVTKVDHLELRGNPQNRFLYHR------TADGTWQQNFVNP 196
BLAST of EWM30619.1 vs. NCBI_GenBank
Match: gi|550277730|ref|WP_022604232.1| (FMN-dependent protein [Rubidibacter lacunae] >gi|549083654|gb|ERN42883.1| PPOX class probable FMN-dependent enzyme, alr4036 family [Rubidibacter lacunae KORDI 51-2]) HSP 1 Score: 150.214 bits (378), Expect = 7.182e-41 Identity = 86/210 (40.95%), Postives = 120/210 (57.14%), Query Frame = 0
Query: 100 WVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLASAPPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP 309
W + ++ RN DAH+R+ QLATV +P RTVVFRGF+ D L+++TDARSEK+ Q+ P E+ WYF KTREQ+R+ GR++ V+ + D LQ R+++W +LS+SAR QF+WP PK + D D + F P + P TF LLLV VD L+L+ PQ RT+ + ++G W V VNP
Sbjct: 6 WRSPIARALHRNRSDAHARFFQLATVMPDG------RPANRTVVFRGFFPNTD-----TLEVVTDARSEKVAQIDRQPWGEVCWYFTKTREQFRIAGRLKFVSADATDADLQRERQERWYDLSDSARLQFIWPQPK--ASRDSDRNAFFVKAPAA-NTKPASTFNLLLVEPVAVDWLELRGDPQNRTLFL------QTDDGKWSVRSVNP 195
BLAST of EWM30619.1 vs. NCBI_GenBank
Match: gi|1047320375|ref|WP_065716365.1| (pyridoxamine 5'-phosphate oxidase [Synechococcus sp. PCC 8807] >gi|1046571951|gb|ANV90381.1| pyridoxamine 5'-phosphate oxidase [Synechococcus sp. PCC 8807]) HSP 1 Score: 149.828 bits (377), Expect = 1.117e-40 Identity = 92/212 (43.40%), Postives = 119/212 (56.13%), Query Frame = 0
Query: 100 WVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLAS--APPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP 309
W L ++ RN H R+ QLATV + KP RTVVFRGF G + LKIITD RSEKI LT PDAEIAWYF KTREQ+R G++++VT S L AR+Q W LS++ARAQFLWP P D+ + D PT + P F LLL +V+++DHL+L+ +PQ R ++ +G W+ VNP
Sbjct: 10 WRSPLARALHRNKSQPHHRFFQLATV------TPTGKPRNRTVVFRGFLEGSND-----LKIITDQRSEKISHLTTCPDAEIAWYFTKTREQFRFSGQIKLVTAASPPSPLNRARQQTWQALSDAARAQFLWPQPG-----DRRGENLA-DFQPTAVNDQEPISNFVLLLFQVTKIDHLELRGNPQNRFLY------DLTADGTWQQKTVNP 198
BLAST of EWM30619.1 vs. NCBI_GenBank
Match: gi|1071032267|ref|WP_069790352.1| (pyridoxamine 5'-phosphate oxidase [Cyanobacterium sp. IPPAS B-1200] >gi|1070624002|gb|OEJ79102.1| pyridoxamine 5'-phosphate oxidase [Cyanobacterium sp. IPPAS B-1200]) HSP 1 Score: 149.443 bits (376), Expect = 1.331e-40 Identity = 85/210 (40.48%), Postives = 119/210 (56.67%), Query Frame = 0
Query: 100 WVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLASAPPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP 309
W L ++ N +SRY QLAT+ S+ P RTVVFRGFY +D + L+IITD RSEK L P +EI WYF KTREQ+R+ G ++I+T KD+ + ARKQ W+ LS++A+ QF W +P D S+ +PD P +TFCLL+ + +VDHL LK +PQ R ++ E+ WE++ +NP
Sbjct: 8 WRSPLAKALHINRAKPYSRYFQLATI------SAEGYPTNRTVVFRGFY-----EDTNWLQIITDIRSEKYQHLQKRPQSEICWYFTKTREQFRINGHIDIITHQEKDQKMLNARKQVWDKLSDNAKIQFTWA---NPGETLNDESIITPDN----LDNPLDTFCLLIFKPQKVDHLQLKGNPQNRYLYQLE------EQNHWEMSPINP 193
BLAST of EWM30619.1 vs. NCBI_GenBank
Match: gi|1210166280|dbj|BAY85361.1| (pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Calothrix parasitica NIES-267]) HSP 1 Score: 149.443 bits (376), Expect = 1.345e-40 Identity = 87/210 (41.43%), Postives = 115/210 (54.76%), Query Frame = 0
Query: 100 WVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLASAPPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP 309
W L ++ +N AHSRY QLATV +D + P RTVVFRGF +D + KIITD RSEKI ++ EI WYF +REQ+R+ G + I+ +D LQ R+ W +LS++AR QF WP HP + FSP P + P + FCLLL +VDHL L+ PQ RT++ R E G W+V +VNP
Sbjct: 6 WRSFLANALKKNRSQAHSRYFQLATV---RNDGT---PANRTVVFRGFL-----EDTNKFKIITDTRSEKITEIQNRSWGEICWYFTNSREQFRIAGNIIIIDVNYQDSELQTVRESTWQDLSDNARIQFAWP---HPGASRDNQEAFSPQQPD--ENKPLDNFCLLLFEPVKVDHLRLRGEPQNRTIYER------DEMGVWDVKEVNP 193
BLAST of EWM30619.1 vs. NCBI_GenBank
Match: gi|1011541067|ref|WP_062433814.1| (pyridoxamine 5'-phosphate oxidase [Synechococcus sp. PCC 73109] >gi|975877146|gb|AMA09089.1| pyridoxamine 5'-phosphate oxidase [Synechococcus sp. PCC 73109]) HSP 1 Score: 149.443 bits (376), Expect = 1.477e-40 Identity = 91/212 (42.92%), Postives = 119/212 (56.13%), Query Frame = 0
Query: 100 WVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLAS--APPETFCLLLVRVSEVDHLDLKASPQRRTVHARRKGQKEGEEGDWEVTKVNP 309
W L ++ RN H R+ QLAT+ + KP RTVVFRGF G + LKIITD RSEKI LT PDAEIAWYF KTREQ+R G++++VT S L AR+Q W LS++ARAQFLWP P D+ + D PT + P F LLL +V+++DHL+L+ +PQ R ++ +G W+ VNP
Sbjct: 10 WRSPLARALHRNKSQPHHRFFQLATI------TPTGKPRNRTVVFRGFLEGSND-----LKIITDQRSEKISHLTTCPDAEIAWYFTKTREQFRFSGQIKLVTAASPPSPLNRARQQTWQALSDAARAQFLWPQPG-----DRRGENLA-DFQPTAVNDQEPVSNFVLLLFQVTKIDHLELRGNPQNRFLY------DLTADGTWQQKTVNP 198 The following BLAST results are available for this feature:
BLAST of EWM30619.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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