EWM25482.1, cds5192 (CDS) Nannochloropsis gaditana

Overview
NameEWM25482.1
Unique Namecds5192
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:415194..415298 +
Alignment locationCM002465.1:415424..416221 +
Alignment locationCM002465.1:416339..416452 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25482.1
Productswib mdm2 domain containing protein
Orig transcript idgnl|cribi|Naga_100583g1.5692.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:415194..415298 +
CM002465.1supercontigCM002465.1:415424..416221 +
CM002465.1supercontigCM002465.1:416339..416452 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR014876DEK_C
IPR003121SWIB_MDM2_domain
IPR009057Homeodomain-like
IPR019835SWIB_domain
Homology
BLAST of EWM25482.1 vs. NCBI_GenBank
Match: gi|585107246|gb|EWM25482.1| (swib mdm2 domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
Query:    1 MAASPPSASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKELTIQVLSERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGADEGREKQEGGEVGKKERASTKPRNPKRKKTGEAGTPAKRGGFPPEKISVQLQGLMGKATASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGRA 338
            MAASPPSASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKELTIQVLSERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGADEGREKQEGGEVGKKERASTKPRNPKRKKTGEAGTPAKRGGFPPEKISVQLQGLMGKATASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGRA
Sbjct:    1 MAASPPSASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKELTIQVLSERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGADEGREKQEGGEVGKKERASTKPRNPKRKKTGEAGTPAKRGGFPPEKISVQLQGLMGKATASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGRA 338          
BLAST of EWM25482.1 vs. NCBI_GenBank
Match: gi|698568599|ref|XP_009774095.1| (PREDICTED: upstream activation factor subunit spp27-like isoform X1 [Nicotiana sylvestris] >gi|1025035994|ref|XP_016443901.1| PREDICTED: upstream activation factor subunit spp27-like isoform X1 [Nicotiana tabacum])

HSP 1 Score: 178.333 bits (451), Expect = 9.207e-50
Identity = 113/342 (33.04%), Postives = 178/342 (52.05%), Query Frame = 0
Query:    7 SASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKELTIQVLSERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGADEGREKQEGGEVGKKERASTKPRNPKRKKTGEAGTPAKR---------GGFPPEKISVQLQGL--MGKATASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGR 337
            S S L D +R IL+ + LE  T  ++R +L  +FG DL D KA I++     L  R   EE      P  D +   + +    +     E  +D S S + E E     K   R+ EK  GE KKKGG FNK  A S ++   +GE  + RP+V K++W YI+ + LQ P+++R ILCDE L  +F   +++MF++  +++KH+   D E+G+              + ++S K R PK+ +      P ++         G   P ++S  L     +G+   +R +V+K IW ++K + LQDP+++  I CD  LK +  VD+ HGF ++KLLT HF+ R
Sbjct:    3 SDSVLVDRLREILKVSDLETTTAGSVRRKLEEEFGVDLNDRKAFIRDQIDLFL--RTHVEET-----PNDDVQEVEQEQETENV----KEEENDDSCSQEEENETDTGAKEKARRSEKMNGEAKKKGG-FNKPCALSPQLQKLVGESELGRPEVVKKIWAYIREKNLQNPQNKRKILCDEVLSEIFRAKTIDMFQMNKVLSKHIWPIDEEDGS------FPLTHAASQVKSSVKKRLPKQGREEALDEPKQKEKRHKGGGSGFLAPVRLSDALVKFFGIGENALTRADVIKRIWQYIKENELQDPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 326          
BLAST of EWM25482.1 vs. NCBI_GenBank
Match: gi|698568607|ref|XP_009774097.1| (PREDICTED: upstream activation factor subunit spp27-like isoform X3 [Nicotiana sylvestris] >gi|1025036000|ref|XP_016443903.1| PREDICTED: upstream activation factor subunit spp27-like isoform X3 [Nicotiana tabacum])

HSP 1 Score: 177.948 bits (450), Expect = 1.038e-49
Identity = 114/334 (34.13%), Postives = 179/334 (53.59%), Query Frame = 0
Query:    7 SASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKELTIQVLSERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGAD-EGREKQEGGEVGKKERASTKPRNPKRKKTGEAGTPAKRGGFPPEKISVQLQGL--MGKATASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGR 337
            S S L D +R IL+ + LE  T  ++R +L  +FG DL D KA I++     L  R   EE      P  D +   + +    +     E  +D S S + E E     K   R+ EK  GE KKKGG FNK  A S ++   +GE  + RP+V K++W YI+ + LQ P+++R ILCDE L  +F   +++MF++  +++KH+   D E+ +  +   K+   + G++E      +  KR K G +G  A      P ++S  L     +G+   +R +V+K IW ++K + LQDP+++  I CD  LK +  VD+ HGF ++KLLT HF+ R
Sbjct:    3 SDSVLVDRLREILKVSDLETTTAGSVRRKLEEEFGVDLNDRKAFIRDQIDLFL--RTHVEET-----PNDDVQEVEQEQETENV----KEEENDDSCSQEEENETDTGAKEKARRSEKMNGEAKKKGG-FNKPCALSPQLQKLVGESELGRPEVVKKIWAYIREKNLQNPQNKRKILCDEVLSEIFRAKTIDMFQMNKVLSKHIWPIDEEDASQVKSSVKKRLPKQGREEALDEPKQKEKRHKGGGSGFLA------PVRLSDALVKFFGIGENALTRADVIKRIWQYIKENELQDPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 318          
BLAST of EWM25482.1 vs. NCBI_GenBank
Match: gi|1111074188|ref|XP_019254556.1| (PREDICTED: upstream activation factor subunit spp27 isoform X1 [Nicotiana attenuata])

HSP 1 Score: 177.563 bits (449), Expect = 1.414e-49
Identity = 111/337 (32.94%), Postives = 181/337 (53.71%), Query Frame = 0
Query:    7 SASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKE---LTIQVLSERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGAD-EGREKQEGGEVGKKERASTKPRNPKRKKTGEAGTPAKRGGFPPEKISVQLQGL--MGKATASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGR 337
            S S L D +R IL+ + LE  T  ++R +L  +FG DL D KA I++   L ++   E    ++ +   +       +VK            E  +D S S + E E     K   R+ EK  GE KKKGG FNK  A S ++   +G+  + RP+V K++W YI+ + LQ P+++R ILCDE L  +F   +++MF++  +++KH+   D E+ +  +   K+   + G++E      +  KR+K G +G  A      P ++S  L     +G+   +R +V+K IW ++K + LQDP+++  I CD  LK +  VD+ HGF ++KLLT HF+ R
Sbjct:    3 SDSVLVDRLREILKVSDLETTTAGSVRRKLEEEFGVDLNDRKAFIRDQIDLFLRTHVEETPNDDVQEVEEEEEQETENVK------------EEENDDSCSQEEENESDTGAKEKARRSEKMNGEAKKKGG-FNKPCALSPQLQKLVGQSELGRPEVVKKIWAYIREKNLQNPQNKRKILCDEVLSEIFRAKTVDMFQMNKVLSKHIWPIDEEDASQVKSSVKKRLPKQGREEALDEPKQKEKRQKGGGSGFLA------PVRLSDALVKFFGIGENALTRADVIKRIWQYIKENELQDPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 320          
BLAST of EWM25482.1 vs. NCBI_GenBank
Match: gi|969996239|ref|XP_015062145.1| (PREDICTED: upstream activation factor subunit spp27 isoform X1 [Solanum pennellii])

HSP 1 Score: 177.948 bits (450), Expect = 1.515e-49
Identity = 120/340 (35.29%), Postives = 182/340 (53.53%), Query Frame = 0
Query:    7 SASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKE-----LTIQVL-SERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGADEGREKQEGGEVGKKERASTKPRNP-KRKKTGEAGTPAKRGGFPPEKISVQLQGLMG--KATASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGR 337
            S S L D +R IL  + L+  T  T+R +L  +FG DL D KA I++     L IQV  + + +  EAE  ++   D   S + E       + D    +     D   +R  KK    R+ EK  GE KKKGG FNK  A S ++   +GE  + RP+V K++W YI+ + LQ PE++R ILCDE L  +F V S++MF++  +++KH+   + E G       +       +E AS +P+   KR+K G +G  A      P ++S  L   +G  +    R +V+K IW ++K + LQDP+++  I CD  LK +  VD+ HGF ++KLLT HF+ R
Sbjct:    3 SDSVLVDRLREILRVSDLDIATAGTVRRRLEEEFGVDLLDRKAFIRDQIDLFLRIQVEETSKNDVHEAENEKEGENDDSCSQEEEQESKEDENGDSCSQEEEEGEDDSAKRAKKKP---RRSEKMNGEAKKKGG-FNKPCALSPQLQKLVGEPELGRPEVVKKIWAYIREKNLQNPENKRKILCDEVLSGIFQVKSIDMFQMNKVLSKHIWPLNEENGTQVKTSVKRRLPKKGREEASDEPKQKEKRQKGGGSGFLA------PVQLSDALVKFLGIDENALPRADVIKRIWQYIKENELQDPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 332          
BLAST of EWM25482.1 vs. NCBI_GenBank
Match: gi|697151461|ref|XP_009629951.1| (PREDICTED: upstream activation factor subunit spp27-like isoform X1 [Nicotiana tomentosiformis] >gi|1025248060|ref|XP_016488352.1| PREDICTED: upstream activation factor subunit spp27-like isoform X1 [Nicotiana tabacum] >gi|1083909066|ref|XP_018634486.1| PREDICTED: upstream activation factor subunit spp27-like isoform X1 [Nicotiana tomentosiformis])

HSP 1 Score: 176.407 bits (446), Expect = 5.375e-49
Identity = 117/342 (34.21%), Postives = 175/342 (51.17%), Query Frame = 0
Query:    7 SASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKELTIQVLSERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGADEGREKQEGGEVGKKERASTKPRNPKRKKTGEAGTP------AKRGG---FPPEKISVQLQGLMGKA--TASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGR 337
            S S L D +R IL+ + LE  T  ++R  L  +FG DL D KA I++     L  R   EE      P  D +   + E     V    E  +D S S + E E     K    + EK  GE KKKGG FNK  A S ++   +GE  + RP+V K++W YI+ + LQ P+++R ILCDE L  +F   +++MF++  +++KH+   D E+G+              + ++S K R PK+ +      P       KRGG     P ++S  L    G      +R +V+K IW ++K + LQDP+++  I CD  LK +  VD+ HGF ++KLLT HF+ R
Sbjct:    3 SDSVLVDRLREILKVSDLETTTAGSVRRNLEEEFGVDLNDRKAFIRDQIDLFL--RIHVEET-----PNDDVQEVEEEEQETENVK---EEENDDSCSQEEENESDTGTKEKSHRSEKMNGEAKKKGG-FNKPCALSPQLQKLVGESELGRPEVVKKIWAYIREKNLQNPQNKRKILCDEVLSEIFRAKTIDMFQMNKVLSKHIWPIDEEDGS------FSLTHPASQVKSSVKKRLPKQGREEALDEPKQKEKRQKRGGSGFLAPVRLSDALVKFFGNGEKALTRADVIKRIWQYIKENELQDPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 327          
BLAST of EWM25482.1 vs. NCBI_GenBank
Match: gi|697151465|ref|XP_009629953.1| (PREDICTED: upstream activation factor subunit spp27-like isoform X3 [Nicotiana tomentosiformis])

HSP 1 Score: 176.022 bits (445), Expect = 6.199e-49
Identity = 116/342 (33.92%), Postives = 174/342 (50.88%), Query Frame = 0
Query:    7 SASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKELTIQVLSERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGADEGREKQEGGEVGKKERASTKPRNPKRKKTGEAGTP------AKRGG---FPPEKISVQLQGLMGKA--TASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGR 337
            S S L D +R IL+ + LE  T  ++R  L  +FG DL D KA I++     L  R   EE      P  D +   + E     V    E  +D S S + E E     K    + EK  GE KKKGG FNK  A S ++   +GE  + RP+V K++W YI+ + LQ P+++R ILCDE L  +F   +++MF++  +++KH+   D E+ +              + ++S K R PK+ +      P       KRGG     P ++S  L    G      +R +V+K IW ++K + LQDP+++  I CD  LK +  VD+ HGF ++KLLT HF+ R
Sbjct:    3 SDSVLVDRLREILKVSDLETTTAGSVRRNLEEEFGVDLNDRKAFIRDQIDLFL--RIHVEET-----PNDDVQEVEEEEQETENVK---EEENDDSCSQEEENESDTGTKEKSHRSEKMNGEAKKKGG-FNKPCALSPQLQKLVGESELGRPEVVKKIWAYIREKNLQNPQNKRKILCDEVLSEIFRAKTIDMFQMNKVLSKHIWPIDEEDAS--------------QVKSSVKKRLPKQGREEALDEPKQKEKRQKRGGSGFLAPVRLSDALVKFFGNGEKALTRADVIKRIWQYIKENELQDPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 319          
BLAST of EWM25482.1 vs. NCBI_GenBank
Match: gi|969996241|ref|XP_015062152.1| (PREDICTED: upstream activation factor subunit spp27 isoform X2 [Solanum pennellii])

HSP 1 Score: 175.252 bits (443), Expect = 1.270e-48
Identity = 119/340 (35.00%), Postives = 181/340 (53.24%), Query Frame = 0
Query:    7 SASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKE-----LTIQVL-SERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGADEGREKQEGGEVGKKERASTKPRNP-KRKKTGEAGTPAKRGGFPPEKISVQLQGLMG--KATASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGR 337
            S S L D +R IL  + L+  T  T+R +L  +FG DL D KA I++     L IQV  + + +  EAE  ++   D   S + E       + D    +     D   +R  KK     + EK  GE KKKGG FNK  A S ++   +GE  + RP+V K++W YI+ + LQ PE++R ILCDE L  +F V S++MF++  +++KH+   + E G       +       +E AS +P+   KR+K G +G  A      P ++S  L   +G  +    R +V+K IW ++K + LQDP+++  I CD  LK +  VD+ HGF ++KLLT HF+ R
Sbjct:    3 SDSVLVDRLREILRVSDLDIATAGTVRRRLEEEFGVDLLDRKAFIRDQIDLFLRIQVEETSKNDVHEAENEKEGENDDSCSQEEEQESKEDENGDSCSQEEEEGEDDSAKRAKKKP----RSEKMNGEAKKKGG-FNKPCALSPQLQKLVGEPELGRPEVVKKIWAYIREKNLQNPENKRKILCDEVLSGIFQVKSIDMFQMNKVLSKHIWPLNEENGTQVKTSVKRRLPKKGREEASDEPKQKEKRQKGGGSGFLA------PVQLSDALVKFLGIDENALPRADVIKRIWQYIKENELQDPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 331          
BLAST of EWM25482.1 vs. NCBI_GenBank
Match: gi|1026080790|ref|XP_016539639.1| (PREDICTED: upstream activation factor subunit spp27-like isoform X1 [Capsicum annuum])

HSP 1 Score: 174.481 bits (441), Expect = 1.665e-48
Identity = 114/331 (34.44%), Postives = 177/331 (53.47%), Query Frame = 0
Query:    7 SASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKELTIQVLSERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGADEGREKQEGGEVGKKERASTKPRNPKRKKTGEAGTPAKRGGFPPEKISVQLQGLMGKATAS--RNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFL 335
            S S L + +R IL  + LE  T  T+R  L  +FG DL D KA I++  I V      +E      Q   D    VK E         +E   ++ +S+D+  ++K       R+ EK  GEEK+KGG FNK  A S ++   +GE  + RP+V K++W YI+ + LQ P+++R ILCD+ L  +F   +++MF++  +++KH+   D ++ A+     +   + G++E      +  KR+K G +G  A      P ++S  L    G    S  R EV+K IW ++K + LQDP+N+  I CD  LK +  VD+ HGF +SKLLT HF+
Sbjct:    3 SDSVLIERLRQILTVSDLETATAGTVRRMLEEEFGVDLLDRKAFIRD-QIDVFLRIHVQETPNDDAQEVED----VKEEENGDSCSEGEEELVENDNSNDTGSKKK------ARRSEKVNGEEKRKGG-FNKPCALSPQLQKLVGEPELGRPEVVKKIWAYIREKKLQNPQNKRKILCDDVLSGIFRAKAIDMFQMNKVLSKHIWPIDEKDAAEVKSSVKRTQKQGREEALDEPKQKEKRQKGGGSGFLA------PVRLSDALGKFFGNGENSLPRAEVIKRIWQYIKENELQDPSNKKTIICDERLKELFQVDSFHGFTVSKLLTAHFI 315          
BLAST of EWM25482.1 vs. NCBI_GenBank
Match: gi|1025036004|ref|XP_016443904.1| (PREDICTED: upstream activation factor subunit spp27-like isoform X4 [Nicotiana tabacum])

HSP 1 Score: 172.94 bits (437), Expect = 8.278e-48
Identity = 114/334 (34.13%), Postives = 178/334 (53.29%), Query Frame = 0
Query:    7 SASALEDAIRSILETAKLEEVTQRTLREQLAGQFGCDLTDEKALIKELTIQVLSERQEREEAEASRQPAGDGEASVKVEGALGLVPSDDESRDDSSSSSDSEEERKVKKKIAGRKKEKSRGEEKKKGGGFNKEYAWSEEMAAFLGEGYMSRPQVTKRMWEYIKTQGLQKPEDRRVILCDERLQRLFSVPSLNMFKLPVMINKHMRQDDREEGAD-EGREKQEGGEVGKKERASTKPRNPKRKKTGEAGTPAKRGGFPPEKISVQLQGL--MGKATASRNEVVKEIWTHVKSHNLQDPANRMMISCDATLKGILGVDACHGFGISKLLTPHFLGR 337
            S S L D +R IL+ + LE  T  ++R +L  +FG DL D KA I++     L  R   EE      P  D +   + +    +     E  +D S S + E E     K   R  EK  GE KKKGG FNK  A S ++   +GE  + RP+V K++W YI+ + LQ P+++R ILCDE L  +F   +++MF++  +++KH+   D E+ +  +   K+   + G++E      +  KR K G +G  A      P ++S  L     +G+   +R +V+K IW ++K + LQDP+++  I CD  LK +  VD+ HGF ++KLLT HF+ R
Sbjct:    3 SDSVLVDRLREILKVSDLETTTAGSVRRKLEEEFGVDLNDRKAFIRDQIDLFL--RTHVEET-----PNDDVQEVEQEQETENV----KEEENDDSCSQEEENETDTGAKEKARS-EKMNGEAKKKGG-FNKPCALSPQLQKLVGESELGRPEVVKKIWAYIREKNLQNPQNKRKILCDEVLSEIFRAKTIDMFQMNKVLSKHIWPIDEEDASQVKSSVKKRLPKQGREEALDEPKQKEKRHKGGGSGFLA------PVRLSDALVKFFGIGENALTRADVIKRIWQYIKENELQDPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 317          
The following BLAST results are available for this feature:
BLAST of EWM25482.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107246|gb|EWM25482.1|0.000e+0100.00swib mdm2 domain containing protein [Nannochlorops... [more]
gi|698568599|ref|XP_009774095.1|9.207e-5033.04PREDICTED: upstream activation factor subunit spp2... [more]
gi|698568607|ref|XP_009774097.1|1.038e-4934.13PREDICTED: upstream activation factor subunit spp2... [more]
gi|1111074188|ref|XP_019254556.1|1.414e-4932.94PREDICTED: upstream activation factor subunit spp2... [more]
gi|969996239|ref|XP_015062145.1|1.515e-4935.29PREDICTED: upstream activation factor subunit spp2... [more]
gi|697151461|ref|XP_009629951.1|5.375e-4934.21PREDICTED: upstream activation factor subunit spp2... [more]
gi|697151465|ref|XP_009629953.1|6.199e-4933.92PREDICTED: upstream activation factor subunit spp2... [more]
gi|969996241|ref|XP_015062152.1|1.270e-4835.00PREDICTED: upstream activation factor subunit spp2... [more]
gi|1026080790|ref|XP_016539639.1|1.665e-4834.44PREDICTED: upstream activation factor subunit spp2... [more]
gi|1025036004|ref|XP_016443904.1|8.278e-4834.13PREDICTED: upstream activation factor subunit spp2... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5204rna5204Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications