EWM25489.1, cds5186 (CDS) Nannochloropsis gaditana

Overview
NameEWM25489.1
Unique Namecds5186
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:395595..395606 -
Alignment locationCM002465.1:395309..395503 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25489.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100236g5.4065.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:395595..395606 -
CM002465.1supercontigCM002465.1:395309..395503 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25489.1 vs. NCBI_GenBank
Match: gi|585107254|gb|EWM25489.1| (hypothetical protein Naga_100236g5 [Nannochloropsis gaditana])

HSP 1 Score: 143.28 bits (360), Expect = 1.984e-43
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 
Query:    1 MAMTVFKSHSPDPSLKSGPGGASQGETQFAAQCLKKRFRRIMHAFKAFSTNRCHTFIKGELSETYIRG 68
            MAMTVFKSHSPDPSLKSGPGGASQGETQFAAQCLKKRFRRIMHAFKAFSTNRCHTFIKGELSETYIRG
Sbjct:    1 MAMTVFKSHSPDPSLKSGPGGASQGETQFAAQCLKKRFRRIMHAFKAFSTNRCHTFIKGELSETYIRG 68
The following BLAST results are available for this feature:
BLAST of EWM25489.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107254|gb|EWM25489.1|1.984e-43100.00hypothetical protein Naga_100236g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5198rna5198Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications