EWM25486.1, cds5184 (CDS) Nannochloropsis gaditana

Overview
NameEWM25486.1
Unique Namecds5184
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:390612..391367 -
Alignment locationCM002465.1:390055..390435 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25486.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100236g3.4062.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:390612..391367 -
CM002465.1supercontigCM002465.1:390055..390435 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25486.1 vs. NCBI_GenBank
Match: gi|585107251|gb|EWM25486.1| (hypothetical protein Naga_100236g3 [Nannochloropsis gaditana])

HSP 1 Score: 757.673 bits (1955), Expect = 0.000e+0
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0 
Query:    1 MSIYVVLATLLPQTTVPKSKLIMAATGSGVLRGEEHKNSHAYQYDLNDKLAENTSSVDEFDVFSKTELDLAKAKRVYQALKSRLDKERNTFQDKTSALEDRVFELESRLHQSKIERLAKEEEARVRQSTLEAEGKRERTRNGLLEEELRETKDIWTQRLTEERKTWQKKLSDKVASLQSQIEEAKTLHAEELKETKDIWAQRLSGERKAWQQKVSEKVELLQGQIDDARHHYTSQIQTLQEDLRDALAGRCQTQEELDVTKTLLREEASQRRSLQTEVEELKAKYRRCMELAAELISIKDTGVTSRSGTGNSSSMPLATVPTRTASTSTSTSRFNSSSVRLSTENDVLKKQLKLTQVLLDEELRKNHSLRQSLARLNV 378
            MSIYVVLATLLPQTTVPKSKLIMAATGSGVLRGEEHKNSHAYQYDLNDKLAENTSSVDEFDVFSKTELDLAKAKRVYQALKSRLDKERNTFQDKTSALEDRVFELESRLHQSKIERLAKEEEARVRQSTLEAEGKRERTRNGLLEEELRETKDIWTQRLTEERKTWQKKLSDKVASLQSQIEEAKTLHAEELKETKDIWAQRLSGERKAWQQKVSEKVELLQGQIDDARHHYTSQIQTLQEDLRDALAGRCQTQEELDVTKTLLREEASQRRSLQTEVEELKAKYRRCMELAAELISIKDTGVTSRSGTGNSSSMPLATVPTRTASTSTSTSRFNSSSVRLSTENDVLKKQLKLTQVLLDEELRKNHSLRQSLARLNV
Sbjct:    1 MSIYVVLATLLPQTTVPKSKLIMAATGSGVLRGEEHKNSHAYQYDLNDKLAENTSSVDEFDVFSKTELDLAKAKRVYQALKSRLDKERNTFQDKTSALEDRVFELESRLHQSKIERLAKEEEARVRQSTLEAEGKRERTRNGLLEEELRETKDIWTQRLTEERKTWQKKLSDKVASLQSQIEEAKTLHAEELKETKDIWAQRLSGERKAWQQKVSEKVELLQGQIDDARHHYTSQIQTLQEDLRDALAGRCQTQEELDVTKTLLREEASQRRSLQTEVEELKAKYRRCMELAAELISIKDTGVTSRSGTGNSSSMPLATVPTRTASTSTSTSRFNSSSVRLSTENDVLKKQLKLTQVLLDEELRKNHSLRQSLARLNV 378
The following BLAST results are available for this feature:
BLAST of EWM25486.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107251|gb|EWM25486.1|0.000e+0100.00hypothetical protein Naga_100236g3 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5196rna5196Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications