EWM25527.1, cds5177 (CDS) Nannochloropsis gaditana

Overview
NameEWM25527.1
Unique Namecds5177
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:375069..378062 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25527.1
Productputative cleavage and polyadenylation specificity factor subunit 2
Orig transcript idgnl|cribi|Naga_100032g44.270.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:375069..378062 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
GO:0005847mRNA cleavage and polyadenylation specificity factor complex
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006378mRNA polyadenylation
GO:0006379mRNA cleavage
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR027075CPSF2
IPR025069Cpsf2_C
IPR001279Beta-lactamas-like
IPR022712Beta_Casp
Homology
BLAST of EWM25527.1 vs. NCBI_GenBank
Match: gi|585107293|gb|EWM25527.1| (putative cleavage and polyadenylation specificity factor subunit 2 [Nannochloropsis gaditana])

HSP 1 Score: 2024.21 bits (5243), Expect = 0.000e+0
Identity = 997/997 (100.00%), Postives = 997/997 (100.00%), Query Frame = 0
Query:    1 MPDGAGRAAAAKNEGNSDVKDLDVEPTAENIAMSPGDAARGTPDAPGEETGSTASAPSPEMSSAVEAEFPAPMEVDEAVLPSESQGSANGGVPDSVQAEAGAGPDASRPAPLLPAVSAQVPPPPPAASDTGEGLTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRLLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSAKRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGALKFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPSTRLWTPPGPGKGGQEEQLGELVGVLDGLVGGSAAEGAMAASVAAAAAAAATEAARTVGIRFDSKVTDVSLEEDEGEEEWREEAAPLVLKEMGNYRLALVQAVASEDRVDANGKPLLRCQPVVATKGGTVLQDKGSEEVSDGAETAFSVLSQTRAPLWLADGDVFLTESSQRQSLRQKLREAGVNPDFHVGPEGASLICDGTTVVRVKDNKVMLEGPLSETYFKVRQAIYSRFVAL 997
            MPDGAGRAAAAKNEGNSDVKDLDVEPTAENIAMSPGDAARGTPDAPGEETGSTASAPSPEMSSAVEAEFPAPMEVDEAVLPSESQGSANGGVPDSVQAEAGAGPDASRPAPLLPAVSAQVPPPPPAASDTGEGLTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRLLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSAKRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGALKFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPSTRLWTPPGPGKGGQEEQLGELVGVLDGLVGGSAAEGAMAASVAAAAAAAATEAARTVGIRFDSKVTDVSLEEDEGEEEWREEAAPLVLKEMGNYRLALVQAVASEDRVDANGKPLLRCQPVVATKGGTVLQDKGSEEVSDGAETAFSVLSQTRAPLWLADGDVFLTESSQRQSLRQKLREAGVNPDFHVGPEGASLICDGTTVVRVKDNKVMLEGPLSETYFKVRQAIYSRFVAL
Sbjct:    1 MPDGAGRAAAAKNEGNSDVKDLDVEPTAENIAMSPGDAARGTPDAPGEETGSTASAPSPEMSSAVEAEFPAPMEVDEAVLPSESQGSANGGVPDSVQAEAGAGPDASRPAPLLPAVSAQVPPPPPAASDTGEGLTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRLLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSAKRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGALKFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPSTRLWTPPGPGKGGQEEQLGELVGVLDGLVGGSAAEGAMAASVAAAAAAAATEAARTVGIRFDSKVTDVSLEEDEGEEEWREEAAPLVLKEMGNYRLALVQAVASEDRVDANGKPLLRCQPVVATKGGTVLQDKGSEEVSDGAETAFSVLSQTRAPLWLADGDVFLTESSQRQSLRQKLREAGVNPDFHVGPEGASLICDGTTVVRVKDNKVMLEGPLSETYFKVRQAIYSRFVAL 997          
BLAST of EWM25527.1 vs. NCBI_GenBank
Match: gi|553190419|ref|XP_005855187.1| (cleavage and polyadenylation specificity factor subunit 2 [Nannochloropsis gaditana CCMP526] >gi|422293869|gb|EKU21169.1| cleavage and polyadenylation specificity factor subunit 2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1876.29 bits (4859), Expect = 0.000e+0
Identity = 923/925 (99.78%), Postives = 924/925 (99.89%), Query Frame = 0
Query:   73 MEVDEAVLPSESQGSANGGVPDSVQAEAGAGPDASRPAPLLPAVSAQVPPPPPAASDTGEGLTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRLLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSAKRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGALKFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPSTRLWTPPGPGKGGQEEQLGELVGVLDGLVGGSAAEGAMAASVAAAAAAAATEAARTVGIRFDSKVTDVSLEEDEGEEEWREEAAPLVLKEMGNYRLALVQAVASEDRVDANGKPLLRCQPVVATKGGTVLQDKGSEEVSDGAETAFSVLSQTRAPLWLADGDVFLTESSQRQSLRQKLREAGVNPDFHVGPEGASLICDGTTVVRVKDNKVMLEGPLSETYFKVRQAIYSRFVAL 997
            MEVDEAVLPSESQGSANGGVPDSVQAEAGAGPDASRPAPLLPAVSAQVPPPPPAASDTGEGLTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRLLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSAKRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGALKFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLG STRLWTPPGPGKGGQEEQLGELVGVLDGLVGGSAAEGAMAASVAAAAAAAATEAARTVGIRFDSKVTDVSLEEDEGEEEWREEAAPLVLK+MGNYRLALVQAVASEDRVDANGKPLLRCQPVVATKGGTVLQDKGSEEVSDGAETAFSVLSQTRAPLWLADGDVFLTESSQRQSLRQKLREAGVNPDFHVGPEGASLICDGTTVVRVKDNKVMLEGPLSETYFKVRQAIYSRFVAL
Sbjct:    1 MEVDEAVLPSESQGSANGGVPDSVQAEAGAGPDASRPAPLLPAVSAQVPPPPPAASDTGEGLTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRLLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSAKRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGALKFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGSSTRLWTPPGPGKGGQEEQLGELVGVLDGLVGGSAAEGAMAASVAAAAAAAATEAARTVGIRFDSKVTDVSLEEDEGEEEWREEAAPLVLKDMGNYRLALVQAVASEDRVDANGKPLLRCQPVVATKGGTVLQDKGSEEVSDGAETAFSVLSQTRAPLWLADGDVFLTESSQRQSLRQKLREAGVNPDFHVGPEGASLICDGTTVVRVKDNKVMLEGPLSETYFKVRQAIYSRFVAL 925          
BLAST of EWM25527.1 vs. NCBI_GenBank
Match: gi|553189337|ref|XP_005854981.1| (cleavage and polyadenylation specificity factor subunit 2, partial [Nannochloropsis gaditana CCMP526] >gi|422294077|gb|EKU21377.1| cleavage and polyadenylation specificity factor subunit 2, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 889.797 bits (2298), Expect = 0.000e+0
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query:  116 VSAQVPPPPPAASDTGEGLTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRLLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLRE 544
            VSAQVPPPPPAASDTGEGLTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRLLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLRE
Sbjct:    1 VSAQVPPPPPAASDTGEGLTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRLLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLRE 429          
BLAST of EWM25527.1 vs. NCBI_GenBank
Match: gi|1069795222|ref|XP_018322472.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Agrilus planipennis])

HSP 1 Score: 302.753 bits (774), Expect = 3.492e-86
Identity = 217/724 (29.97%), Postives = 335/724 (46.27%), Query Frame = 0
Query:  134 LTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRL-LWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVP-VIERIVGEELAGLREKEDRERRKA----------------LEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSAKRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGAL--KFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPSTRLWTPP-GPGKGGQEEQLGELVGVLDGLVGGSAAEGAMAASVAAAAAAAATEAARTVGIRFDSKVTDVSLEEDE 836
            +  + L G L+  P CYLL+V E  +LLDCGWD + D  +++ L   +  +  VLLS+PD++H+GALP++   L    PIY+T PV+KM QM +YDLY      +         FTLD+VDAA  +   LK++Q + ++ +G + L+VTP PAG ++GG  W++     E+I+YA DFN K ERHL G          +K QRP L ITDA  +       R  + + +     TLR  G+VL+ V+T+GR  EL   L+  WR+    L  Y + LL++++ NV+ F KS +E+M  +++R F+ +  NPF  KH+    SM EL     +  +P VVLAS   ++ GFSR L  +W S P N+++L      G+LA      R L +   + ++  +I+R V  E A L E E  E+ K                 +E     R  H+++    G + S   G         P+ P +                              ++ D YGE +R     D   A   P+    +                      +++++ + E         L  K ++    V+V  +V+    EGRSDG++L  IL+ L PR +I VRG+PE    +  H  + +G   R++ P  G       E     V + D LV     +    A VA   A       +T   R  +    + ++EDE
Sbjct:    5 IKLQALSGALDESPPCYLLQVDEVRILLDCGWDEKFDFNVIKELKRHVHSIDAVLLSYPDITHLGALPYLVGKLGLNCPIYSTIPVYKMGQMFMYDLY-----QSHYNMENFELFTLDDVDAAFDKIIQLKYNQSISLKGKG-YGLTVTPLPAGHMIGGTIWKIMKVGEEDIIYANDFNHKKERHLNGC-------ELEKLQRPSLLITDAFNATYQQARRRARDEKLMTNILQTLRNNGNVLVAVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMQEL----SKVPSPKVVLASMPDLECGFSRELFLQWCSYPNNSVILTSRTSPGTLA------RDLIENGGNRTIDLIIKRRVKLEGAELEEFEKNEKSKKETVDKEDNSSSDSDDDIEVSVISRGRHDIVIKQEGKISS---GFFKATKKQAPMFPFKEE---------------------------KIKCDDYGEIIRPE---DYKMADIAPEGEENK----------------------ENIVLKKEEEDFITDVTELPTKCIVLNRTVQVNAQVQFIDFEGRSDGESLLKILSQLRPRRVIVVRGSPEDTATIQNHCRENVG--ARVFCPIRGETVDATSETHIYQVRLTDALVSQLRFQKGKDAEVAWVDAQVVVREGQTDAKRMSADDEPMEVDEDE 648          
BLAST of EWM25527.1 vs. NCBI_GenBank
Match: gi|443725188|gb|ELU12868.1| (hypothetical protein CAPTEDRAFT_155355 [Capitella teleta])

HSP 1 Score: 295.819 bits (756), Expect = 9.907e-84
Identity = 222/717 (30.96%), Postives = 338/717 (47.14%), Query Frame = 0
Query:  141 GVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAV-EAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRL-LWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSAKRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLR-EGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGA-LKFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPST-RLWTPPGPGKGGQEEQLGELVGVLDGLVGGSAAEGAMAASVAAAAAAAATEAARTVGIRFDSKVTDVSLEE--DEGEEEWREEAAPLVL 850
            GV    P CY+L+V E   LLDCGWD + D   +E L   LPQ+  VLLS+PD  H+GALP++        PIY+T PV+KM QM +YDLY      +   +     F+LD+VDAA  R Q LK+SQ + ++ +G   L +TP PAG ++GG  W++     EEI+YAVD+N K ERHL G V E  N        RP L ITDA  +       R  + + +     TLR  G+ L+ ++T+GR  EL   L+  WR+    L  Y + LL+++A NV+ F KS VE+M  +++R F+    NPF  KH+    SM EL     +   P VVLAS   + TGFSR L  +W S P+N ++L       +L      + +  + ++   V    R+ G  L      E RER+  +E E+  ++  E  EG   +  S ++ +  G   +  +   +     K+++K+ AM+           +   ++ D YGE +R E   + E                                   D+ +  E ++ V   T    K +     +E+R  +     EGRSDG ++R I++ + PR +I VRG+ ES   L         P   +++TP          +L ELV   D        +  +  SV +A   +    AR   I +   + D++  E  ++GE    EEA P+V+
Sbjct:   12 GVDGESPPCYMLQVDEFHFLLDCGWDEEFDPVFMENLKKHLPQIDAVLLSYPDPQHLGALPYLVGKCGMTCPIYSTLPVYKMGQMFMYDLY-----QSHHNSEEFNLFSLDDVDAAFDRIQQLKYSQTINLKGKGH-GLQITPLPAGHMIGGTIWKIVKDGEEEIIYAVDYNHKRERHLNGCVLETIN--------RPHLLITDAYNADFNQARRRLRDEQLMTTILQTLRNDGNCLVALDTAGRILELAHLLDQMWRNQESGLMAYSLALLNNVAYNVVEFAKSQVEWMSDKIMRSFEERRNNPFQFKHLQLCHSMAEL----AKVPEPKVVLASTPDLQTGFSRELFVQWCSNPKNCIILTNRTAPPTLCRQL--IDYPNRGSVRLEVKRRVRLEGRALEDFLRAE-RERKAEVEREKAEKERRE-REGLESSDDSADEEVGDGGRHDLMVKMEKGKGFFKQVKKSQAMFP---------FEEEKLKWDEYGEIIRIEDYIIKEATTME------------------------------DEPMHNELKSFVTEKTEVPTKCISSSETLELRANILYIDFEGRSDGDSMRKIISQVRPRQLILVRGSRESTESLAAFCRD--APDIGKVYTP----------RLNELV---DATTESKIFQVRLKDSVVSALNFS---KARDAEIAWIDAMLDLNQAEAMEDGENPEDEEAVPVVI 649          
BLAST of EWM25527.1 vs. NCBI_GenBank
Match: gi|766937081|ref|XP_011500980.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Ceratosolen solmsi marchali])

HSP 1 Score: 290.812 bits (743), Expect = 8.770e-82
Identity = 211/695 (30.36%), Postives = 334/695 (48.06%), Query Frame = 0
Query:  134 LTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRL-LWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSA--KRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGAL--KFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPSTRLWTPP-GPGKGGQEEQLGELVGVLDGLVGG---SAAEGAMAASVAAAAAAAATEAARTV 819
            +    + G L+  P CY+L+V E  +LLDCGW+   D+  ++ L   + Q+  VLLS+PD SH+GALP++        PIY T PV+KM QM +YD+Y ++             FTLD+VDAA  +   LK++Q + ++ +G + +++TP PAG ++GG  W++     E+I+YAVDFN K ERHL G          ++ QRP L ITD+  +       R  + + +     TLR GG+VL+ V+T+GR  EL   L+  WR+    L  Y + LL++++ NV+ F KS +E+M  ++++ F+ +  NPF  KH+    SM EL     +  +P VVLAS   M+ GFSR L  +W S P+N++++      G+LA     + +     ++  +    R+ G EL      E+ ++R+ L+ E+ ++   E ME    +  SE++  + G      L   Q       K+ +K   M+    +L         ++VD YGE +R  +               A  L    P        ++        + TE + Q    T  +  K +     + V   V     EGRSDG++L+ IL  L PR I+ VRG+P+   D  L A +      R++ P  G       E     V + D LV G   S  +G    +   A   A  +  R V
Sbjct:    5 IKLHAISGALDESPPCYILQVDELHILLDCGWNENFDQDFIKELKRHVNQIDAVLLSYPDPSHLGALPYLVGKCGLSCPIYATIPVYKMGQMFMYDIYQSR-----HNMEDFTLFTLDDVDAAFDKIVQLKYNQSISMKGKG-YGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGC-------ELERLQRPSLLITDSFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVGVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMKSFEGARNNPFQFKHLQLCHSMAEL----NQVPSPKVVLASTPDMECGFSRDLFLQWCSNPQNSIIITCRTSPGTLARDL--VENGGNRNITLEIKKKVRLEGTEL------EEYQKREKLKQEQIKQ---EKMETADISSESEDEIEVGGTRGKHDLLVKQEHKPGFFKQSKKQHPMF---PFL------EDKIKVDEYGEIIRSED------------YKIAEVL----PETEDNKENIE--------VKTEEQIQHPENTSDVPTKCIQSTRTIAVNASVTYIDFEGRSDGESLQKILAQLRPRRIVLVRGSPK---DTELLAQQAQNVGARVFIPARGETLDATTETHIYQVRLTDALVTGLNFSRGKGDSEVAWVDALVTAREQVCRDV 635          
BLAST of EWM25527.1 vs. NCBI_GenBank
Match: gi|1176060847|ref|XP_020624491.1| (cleavage and polyadenylation specificity factor subunit 2-like isoform X2 [Orbicella faveolata])

HSP 1 Score: 290.426 bits (742), Expect = 2.300e-81
Identity = 243/876 (27.74%), Postives = 394/876 (44.98%), Query Frame = 0
Query:  134 LTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRS-DRLLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELA-GLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSAKRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGAL-----KFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPS-TRLWTP-PGPGKGGQEEQLGELVGVLDGLVGGSAAEGAMAASVAAAAAAAATEAART-VGIRF-DSKVTDVSLEEDEGEEEWREEAAPLVLKEMGNYRLALVQAVASEDRVDANGKPLLRCQPVVATKGGTVLQDKGSEEVSDGAETAFSVLSQTRAPLWLADGDVFLTESSQRQSLRQKLREAGVNPDFHVGPEGASLICDGTTVVRVKDN-KVMLEGPLSETYFKVRQAIYSRFVAL 997
            +   VL G  +  PLCYLL+V E   LLDCGW+      ++EP+   + Q+  VL++FPD+ HMGALP++        PIY T PV+KM QM +YDLY      +         F+LD+VDA   +   LK+SQ + ++ +G   L++TPY AG ++GG  W++     E+I+YAVD+N K ERHL GAV     LS     RP L ITD+  + N+    R+ +T+ +     T R+ G+VLI V+T+GR  EL   L+  WR+ D  L  Y + +L++++ NV+ F KS VE+M  +V++ F+    NP+  +H     S+    A +     P +VLAS   +  GFSR L  +WA  P+N ++       G+LA +   + +L +  +   V    R+ GEEL   L +++++E+ + +     RR +H L+        S+    L G   +  +      +  K  RK++   +   Y +F C +   V+ D YGE ++             P+    R L              +             + +  AG G L     K +  +  + +R  +     EGRSDG++++ IL+ + PRN+I V G  E+   L  +  +       +++TP  G       E+    V + D LV       A  A +A         A+ + VG+   D ++ D    EDEG+E+   + +                                                 G EE  D       VL Q           V++ E  +    +Q L +AG+  +F     G  LIC+    VR  +  +V LEG + + Y+K+R+ +Y ++  +
Sbjct:    5 IKLTVLSGAYDEGPLCYLLQVDEFRFLLDCGWNESFSAEIMEPIKKHIHQIDAVLITFPDIYHMGALPYLVGKCGLHCPIYATIPVYKMGQMFMYDLY-----QSHQNYEDFDVFSLDDVDAVFDKIIQLKYSQNVSLKGKGHG-LTITPYAAGHMIGGTMWKIVKDGEEDIIYAVDYNHKKERHLNGAV--LETLS-----RPSLLITDSFNALNVQARRRERDTQLMNEMLQTARRDGNVLIVVDTAGRVLELSQLLDQLWRNPDSGLSAYSLAMLNNVSYNVVEFAKSQVEWMSDKVMKSFEVGRMNPYQFRHCSLCHSL----ADLARVPEPKIVLASVADLTCGFSRELFIKWAEDPKNTVVFTCRPSPGALARTL--IDNLQQKTIDIEVKTRVRLEGEELERYLEKEKEKEKSRPVTDATDRRYSHRLV---AEESDSDSDEDLEGGVRHDLMM-----ADEKGGRKSSFFKQARSYPMFPCHEE-KVKWDDYGEFIK-------------PEDFMVRELAAAEEEKAKEQNKKE-----------TVDTEALAGQGELAKVPTKCVAEKRQLNLRCSMLYIDFEGRSDGESIKRILSLVNPRNLILVHGEAEATEHLAEYCRQTSSIQVNQVFTPRCGDTVDSTGERYIYQVKLRDALVSSLQFSRARDAELAWVDGQLHMNASDSHVGLVLEDGELRD----EDEGQEKMETDQS-------------------------------------------------GKEEPMD----TVPVLEQLSLSEITGHTSVYINE-PRLSDFKQVLNKAGIQAEF----AGGVLICNNVVAVRRNETGRVGLEGAVCDDYYKIRELLYEQYAVV 766          
BLAST of EWM25527.1 vs. NCBI_GenBank
Match: gi|752861633|ref|XP_011258467.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Camponotus floridanus] >gi|307189918|gb|EFN74154.1| Probable cleavage and polyadenylation specificity factor subunit 2 [Camponotus floridanus])

HSP 1 Score: 289.656 bits (740), Expect = 2.655e-81
Identity = 201/668 (30.09%), Postives = 328/668 (49.10%), Query Frame = 0
Query:  134 LTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRL-LWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSAKRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGA---LKFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPSTRLWTPPGPGKGGQEEQLGEL----VGVLDGLVGG 793
            +    + G ++  P CY+L+V E  +LLDCGWD   D+  ++ L   + Q+  VLLS+PD  H+GALP++        PIY T PV+KM QM +YD+Y ++             FTLD+VDAA  +   LK++Q + ++ +G + +++TP PAG ++GG  W++     E+I+YAVDFN K ERHL G          ++ QRP L ITDA  +       R  + + +     TLR GG+VL+ V+T+GR  EL   L+  WR+    L  Y + LL++++ NV+ F KS +E+M  +++R F+ +  NPF  KH+    SM+EL     +  +P VVLAS   M+ GFSR L  +W + P+N++++      G+LA    +         + ++ V  R+   +L G+ E E+ ++R+ L+ E+ +++  E        V SE +  +    + G    L    S     K +    + +Y +F   +   +++D YGE ++     D   A   P+    +                      ++V M + E        A    K +     + V   V     EGRSDG++L+ IL  L PR ++ VRG+P+   D  + A +      R++    PG+G   +   E     V + D LV G
Sbjct:    5 IKLHAVSGAMDESPPCYILQVDELRILLDCGWDENFDQDFIKELKRHVNQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSR-----HNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKG-YGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGC-------ELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMVEL----NQVPSPKVVLASTPDMECGFSRELFLQWCTNPQNSIIITSRTSPGTLARDLVE----KGGNRNITLDVKRRV---KLEGI-ELEEYQKREKLKQEQMKQEQME-----TADVSSESEDEIEVGGARGKHDLLVKQESKPGFFKQS----KKQYPMFPFVE-EKIKIDEYGEIIKPE---DYKIAETAPEVEDNK----------------------ENVEMKQEETNHHPEIAADIPTKCVQVSRTMTVNAAVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSPK---DTEILAQQAQSAGARVFI---PGRGETLDATTETHIYQVRLTDALVSG 606          
BLAST of EWM25527.1 vs. NCBI_GenBank
Match: gi|780618981|ref|XP_011703920.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Wasmannia auropunctata] >gi|780618985|ref|XP_011703929.1| PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Wasmannia auropunctata])

HSP 1 Score: 289.656 bits (740), Expect = 2.792e-81
Identity = 218/748 (29.14%), Postives = 352/748 (47.06%), Query Frame = 0
Query:  134 LTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRL-LWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSA--KRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVR---AGTGALKFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPSTRLWTPPGPGKGGQEEQLGEL----VGVLDGLVGG---SAAEGAMAASVAAAAAAAATEAARTVGIRFDSKVTDVSLEEDEGEEEWREEAAPLVLKEMGNYRLALVQAVASED 868
            +    + G +   P CY+L+V E  +LLDCGWD   D+  ++ L   + Q+  VLLS+PD  H+GALP++        PIY T PV+KM QM +YD+Y ++             FTLD+VDAA  +   LK++Q + ++ +G + +++TP PAG ++GG  W++     E+I+YAVDFN K ERHL G          ++ QRP L ITDA  +       R  + + +     TLR GG+VL+ V+T+GR  EL   L+  WR+    L  Y + LL++++ NV+ F KS +E+M  +++R F+ +  NPF  KH+    SM EL     +  +P VVLAS   M+ GFSR L  +W + P+N+++L      G+LA    +         + ++ V  R+   +L G+ E E+ ++R+ L+ E+ ++   E ME    +  SE++  + G      L   Q S     K+ +K   M+  P            +++D YGE ++     D   A   P+    +                      +++ M + EA      A     K +     + V   V     EGRSDG++L+ IL  L PR ++ VRG+P+   D  + A +      R++    PG+G   +   E     V + D LV G   S  +G    +   A   A  +  R         + D   E    E +      PL+L E+  ++   +  +   D
Sbjct:    5 IKLHAVSGAMNESPPCYILQVDELRILLDCGWDENFDQDFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDIYQSR-----HNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKG-YGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGC-------ELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAEL----NQVPSPKVVLASTPDMECGFSRELFLQWCTNPQNSIILTSRTSPGTLARDLVE----KGGNRNITLDVKRRV---KLEGI-ELEEYQKREKLKQEQMKQ---EQMETADVSSESEDEIEVGGGRGKHDLLVKQESKPGFFKQSKKQHPMF--PFV-------EEKIKIDEYGEIIKPE---DYKIAEAVPEVEDNK----------------------ENIEMKQEEANYHPEVAMDIPTKCVQVSRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSPK---DTEILAQQAQSTGARVFI---PGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWIDAMITARDQVCR-------DAIADTESENAIDESDKILTLEPLLLNEVPGHQTTFINELKLSD 677          
BLAST of EWM25527.1 vs. NCBI_GenBank
Match: gi|801376998|ref|XP_012064360.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Atta cephalotes] >gi|1068376432|ref|XP_018057949.1| PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Atta colombica] >gi|1068376435|ref|XP_018058020.1| PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Atta colombica] >gi|1068376439|ref|XP_018058097.1| PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Atta colombica])

HSP 1 Score: 289.271 bits (739), Expect = 2.907e-81
Identity = 209/697 (29.99%), Postives = 335/697 (48.06%), Query Frame = 0
Query:  134 LTFRVLYGVLEHEPLCYLLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGALPWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTLDEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYKKMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNLSTDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDRL-LWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVVPAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLLCGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRERRKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSA--KRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGPQAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGA---LKFLMRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTDLTLHAGKMLGPSTRLWTPPGPGKGGQEEQLGEL----VGVLDGLVGG---SAAEGAMAASVAAAAAAAATEAAR 817
            +    + G +   P CY+L+V E  +LLDCGWD   D+  ++ L   + Q+  VLLS+PD  H+GALP++        PIY T PV+KM QM +YD+Y ++             FTLD+VDAA  +   LK++Q + ++ +G + +++TP PAG ++GG  W++     E+I+YAVDFN K ERHL G          ++ QRP L ITDA  +       R  + + +     TLR GG+VL+ V+T+GR  EL   L+  WR+    L  Y + LL++++ NV+ F KS +E+M  +++R F+ +  NPF  KH+    SM EL     +  +P VVLAS   M+ GFSR L  +W S P+N+++L      G+LA    +         + ++ V  R+   +L G+ E E+ ++R+ L+ E+ ++   E ME    +  SE++  + G+     L   Q S     K+ +K   M+               +++D YGE ++     D   A   P+    +                      ++V M + E             K +    ++ V   V     EGRSDG++L+ IL  L PR ++ VRG+P+   D  + A +      R++    PG+G   +   E     V + D LV G   S  +G    +   A   A  +  R
Sbjct:    5 IKLHAISGAMNESPPCYILQVDELRILLDCGWDENFDQDFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDIYQSR-----HNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKG-YGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGC-------ELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAEL----NQVPSPKVVLASTPDMECGFSRELFLQWCSNPQNSIILTSRTSPGTLARDLVE----KGGNRNITLEVKRRV---KLEGI-ELEEYQKREKLKQEQLKQ---EQMETADVSSESEDEIEVGGSRGKHDLLVKQESKPGFFKQSKKQHPMFPFVE---------EKIKIDEYGEIIKPE---DYKIAETVPEVEDNK----------------------ENVEMKQDEFNYHPEVAVDIPTKCVQVSRMMTVNAAVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSPK---DTEILAQQAQSTGARVFI---PGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWIDAMITARDQVCR 633          
The following BLAST results are available for this feature:
BLAST of EWM25527.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107293|gb|EWM25527.1|0.000e+0100.00putative cleavage and polyadenylation specificity ... [more]
gi|553190419|ref|XP_005855187.1|0.000e+099.78cleavage and polyadenylation specificity factor su... [more]
gi|553189337|ref|XP_005854981.1|0.000e+0100.00cleavage and polyadenylation specificity factor su... [more]
gi|1069795222|ref|XP_018322472.1|3.492e-8629.97PREDICTED: probable cleavage and polyadenylation s... [more]
gi|443725188|gb|ELU12868.1|9.907e-8430.96hypothetical protein CAPTEDRAFT_155355 [Capitella ... [more]
gi|766937081|ref|XP_011500980.1|8.770e-8230.36PREDICTED: probable cleavage and polyadenylation s... [more]
gi|1176060847|ref|XP_020624491.1|2.300e-8127.74cleavage and polyadenylation specificity factor su... [more]
gi|752861633|ref|XP_011258467.1|2.655e-8130.09PREDICTED: probable cleavage and polyadenylation s... [more]
gi|780618981|ref|XP_011703920.1|2.792e-8129.14PREDICTED: probable cleavage and polyadenylation s... [more]
gi|801376998|ref|XP_012064360.1|2.907e-8129.99PREDICTED: probable cleavage and polyadenylation s... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5189rna5189Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications