EWM25524.1, cds5168 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|585107290|gb|EWM25524.1| (hypothetical protein Naga_100032g34 [Nannochloropsis gaditana]) HSP 1 Score: 278.485 bits (711), Expect = 8.157e-95 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query: 1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPAPPEAEDRQPR 137
MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPAPPEAEDRQPR
Sbjct: 1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPAPPEAEDRQPR 137
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|291001755|ref|XP_002683444.1| (predicted protein [Naegleria gruberi] >gi|284097073|gb|EFC50700.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 140.969 bits (354), Expect = 1.031e-40 Identity = 61/120 (50.83%), Postives = 88/120 (73.33%), Query Frame = 0
Query: 1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPS 120
M+ ++A+ +NV+L+++D+P +V FY EGLG+ + ++ AE +G + L +GEA +TGYSP LCFDV +MD TI +LL++GA LDGPIKYP +GK+ +RSPDGHMIGLFE +
Sbjct: 1 MSKKIASLKNVMLLIKDVPKSVKFYS-EGLGMTVNHSTEHWAELQSGHMKVCLNKVEGEASSTTGYSPFLCFDVNEMDKTIYKLLEMGAILDGPIKYPSHGKVAALRSPDGHMIGLFEEN 119
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|1173956601|gb|OQS03352.1| (hypothetical protein THRCLA_21185 [Thraustotheca clavata]) HSP 1 Score: 133.65 bits (335), Expect = 1.072e-37 Identity = 70/128 (54.69%), Postives = 89/128 (69.53%), Query Frame = 0
Query: 1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFD-TGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPA 127
MASRL R ++++ RD+ ++ FY +EGLGL L R SD AEFD G L +K A GEA CS GYSP L FDV DMD TI RL+ LGA++DGPIKYP +GK+ +RSPDG MIGL+E + S+ +
Sbjct: 1 MASRL---RQLLVLSRDVATSKRFY-QEGLGLQLLRESDTFAEFDVNAGVTLSIKQAHGEAACSAGYSPFLNFDVHDMDETIPRLIMLGAAMDGPIKYPAFGKVAAVRSPDGTMIGLYESNTMDSATS 124
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|669144010|ref|XP_008607567.1| (hypothetical protein SDRG_03707 [Saprolegnia diclina VS20] >gi|530740501|gb|EQC38743.1| hypothetical protein SDRG_03707 [Saprolegnia diclina VS20]) HSP 1 Score: 131.724 bits (330), Expect = 5.342e-37 Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 0
Query: 1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFD-TGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPA 127
MA+RL R ++++ RD+ + FY +EGLGL + R+SD AEF+ G L +K A GEA CS GYSP L FDV DMD TI RLL LGA++DGPIKYP +GK+ +RSPDG MIGL+E + S+ +
Sbjct: 1 MATRL---RQLMILSRDVARSSRFY-EEGLGLQILRQSDTFAEFNVNAGVTLSIKQAHGEAACSAGYSPFLNFDVYDMDETIPRLLMLGAAMDGPIKYPAFGKVAAVRSPDGTMIGLYESNTMESATS 124
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|971512956|dbj|GAQ85263.1| (hypothetical protein KFL_002260190 [Klebsormidium nitens]) HSP 1 Score: 130.954 bits (328), Expect = 8.155e-37 Identity = 64/117 (54.70%), Postives = 80/117 (68.38%), Query Frame = 0
Query: 5 LANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSI 121
+A R ++L+ RD+P A FY EGLGL + SD AE +G L LK D EA C+TGYSP L FDV D+D T+ RLL LGA LDGPIKYP +GK+ +R PDGHM+GL EP++
Sbjct: 1 MARLRYIMLLQRDVPRAAKFY-SEGLGLTVNVCSDRWAELQSGDMKLALKQVDSEAHCTTGYSPFLHFDVDDLDGTVQRLLSLGAFLDGPIKYPTHGKVAAMRGPDGHMLGLHEPAL 116
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|813143276|ref|XP_012199583.1| (hypothetical protein SPRG_05474 [Saprolegnia parasitica CBS 223.65] >gi|813200126|ref|XP_012209634.1| hypothetical protein SPRG_14534 [Saprolegnia parasitica CBS 223.65] >gi|641525145|gb|KDO19633.1| hypothetical protein SPRG_14534 [Saprolegnia parasitica CBS 223.65] >gi|641535614|gb|KDO29517.1| hypothetical protein SPRG_05474 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 131.339 bits (329), Expect = 8.362e-37 Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 0
Query: 1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFD-TGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPA 127
MA+RL R ++++ RD+ + FY +EGLGL + R+SD AEF+ G L +K A GEA CS GYSP L FDV DMD TI RLL LGA++DGPIKYP +GK+ +RSPDG MIGL+E + S+ +
Sbjct: 1 MATRL---RQLMILSRDVARSSRFY-EEGLGLQILRQSDTFAEFNVNAGVTLSIKQAHGEAACSAGYSPFLNFDVYDMDETIPRLLMLGAAMDGPIKYPAFGKVAAVRSPDGTMIGLYESNTMDSATS 124
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|1173940989|gb|OQR90255.1| (hypothetical protein ACHHYP_05676 [Achlya hypogyna]) HSP 1 Score: 129.798 bits (325), Expect = 2.634e-36 Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 0
Query: 1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTG-GTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPA 127
MA+RL R ++++ RD+ + FY +EGLGL L R+SD AEFD G L +K A GEA CS GYSP L FDV DMD TI RL+ LGA++DGPIKYP +GK+ +RSPDG MIGL+E + ++ +
Sbjct: 1 MATRL---RQLLVLSRDVARSSRFY-EEGLGLRLVRQSDSFAEFDVNCGVTLSIKQAHGEAACSAGYSPFLNFDVHDMDETIPRLIMLGAAMDGPIKYPAFGKVAAVRSPDGTMIGLYESNTMDTATS 124
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|695427710|ref|XP_009529767.1| (hypothetical protein PHYSODRAFT_508215 [Phytophthora sojae] >gi|348676200|gb|EGZ16018.1| hypothetical protein PHYSODRAFT_508215 [Phytophthora sojae]) HSP 1 Score: 129.413 bits (324), Expect = 4.712e-36 Identity = 63/117 (53.85%), Postives = 84/117 (71.79%), Query Frame = 0
Query: 5 LANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDT-GGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPS 120
++ R ++++ RDL + FY +EGLGL L R SD AEFDT G PL +K+A EA CS+GYSP L FD++D+ + RLL LGA +DGPIKYP +GK+ +RSPDG MIGL+EP+
Sbjct: 1 MSRLRQLMVLSRDLARSKQFY-QEGLGLKLLRSSDTFAEFDTQAGVPLCIKLAQSEAACSSGYSPFLNFDILDLSDAVPRLLMLGAIMDGPIKYPAHGKVAALRSPDGVMIGLYEPN 116
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|301105455|ref|XP_002901811.1| (hypothetical protein PITG_11022 [Phytophthora infestans T30-4] >gi|262099149|gb|EEY57201.1| hypothetical protein PITG_11022 [Phytophthora infestans T30-4]) HSP 1 Score: 128.257 bits (321), Expect = 1.330e-35 Identity = 63/117 (53.85%), Postives = 83/117 (70.94%), Query Frame = 0
Query: 5 LANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDT-GGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPS 120
++ R ++++ RDL + FY +EGLGL L R SD AEFDT G PL +K+A EA CS+GYSP L FD+ D+ + RLL LGA +DGPIKYP +GK+ +RSPDG MIGL+EP+
Sbjct: 1 MSRLRQLMVLSRDLARSKQFY-QEGLGLKLLRSSDTYAEFDTQAGVPLCIKLAQSEAACSSGYSPFLNFDIPDLSDAVPRLLMLGAIMDGPIKYPAHGKVAALRSPDGVMIGLYEPN 116
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|673020440|ref|XP_008864181.1| (hypothetical protein H310_02450 [Aphanomyces invadans] >gi|574481095|gb|ETW08088.1| hypothetical protein H310_02450 [Aphanomyces invadans]) HSP 1 Score: 126.716 bits (317), Expect = 4.269e-35 Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 0
Query: 1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFD-TGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPA 127
MA+RL R ++++ RD+ + FY ++GLGL L R+SD +EFD G L +K A GEA CS GYSP L FDV DM TI RL+ LGA++DGPIKYP +GK+ +RSPDG MIGL+E + S+ +
Sbjct: 1 MAARL---RQLMVLSRDVAKSTQFY-QDGLGLHLIRQSDSFSEFDMQAGVTLSIKQAHGEAACSAGYSPFLNFDVDDMMETIPRLISLGAAMDGPIKYPAFGKVAAVRSPDGTMIGLYESNTMESATS 124 The following BLAST results are available for this feature:
BLAST of EWM25524.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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