EWM25524.1, cds5168 (CDS) Nannochloropsis gaditana

Overview
NameEWM25524.1
Unique Namecds5168
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:338493..338518 -
Alignment locationCM002465.1:338120..338399 -
Alignment locationCM002465.1:337905..338012 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25524.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100032g34.267.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:338493..338518 -
CM002465.1supercontigCM002465.1:338120..338399 -
CM002465.1supercontigCM002465.1:337905..338012 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR025870Glyoxalase-like_dom
IPR029068Glyas_Bleomycin-R_OHBP_Dase
Homology
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|585107290|gb|EWM25524.1| (hypothetical protein Naga_100032g34 [Nannochloropsis gaditana])

HSP 1 Score: 278.485 bits (711), Expect = 8.157e-95
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query:    1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPAPPEAEDRQPR 137
            MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPAPPEAEDRQPR
Sbjct:    1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPAPPEAEDRQPR 137          
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|291001755|ref|XP_002683444.1| (predicted protein [Naegleria gruberi] >gi|284097073|gb|EFC50700.1| predicted protein [Naegleria gruberi])

HSP 1 Score: 140.969 bits (354), Expect = 1.031e-40
Identity = 61/120 (50.83%), Postives = 88/120 (73.33%), Query Frame = 0
Query:    1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPS 120
            M+ ++A+ +NV+L+++D+P +V FY  EGLG+ +   ++  AE  +G   + L   +GEA  +TGYSP LCFDV +MD TI +LL++GA LDGPIKYP +GK+  +RSPDGHMIGLFE +
Sbjct:    1 MSKKIASLKNVMLLIKDVPKSVKFYS-EGLGMTVNHSTEHWAELQSGHMKVCLNKVEGEASSTTGYSPFLCFDVNEMDKTIYKLLEMGAILDGPIKYPSHGKVAALRSPDGHMIGLFEEN 119          
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|1173956601|gb|OQS03352.1| (hypothetical protein THRCLA_21185 [Thraustotheca clavata])

HSP 1 Score: 133.65 bits (335), Expect = 1.072e-37
Identity = 70/128 (54.69%), Postives = 89/128 (69.53%), Query Frame = 0
Query:    1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFD-TGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPA 127
            MASRL   R ++++ RD+ ++  FY +EGLGL L R SD  AEFD   G  L +K A GEA CS GYSP L FDV DMD TI RL+ LGA++DGPIKYP +GK+  +RSPDG MIGL+E +   S+ +
Sbjct:    1 MASRL---RQLLVLSRDVATSKRFY-QEGLGLQLLRESDTFAEFDVNAGVTLSIKQAHGEAACSAGYSPFLNFDVHDMDETIPRLIMLGAAMDGPIKYPAFGKVAAVRSPDGTMIGLYESNTMDSATS 124          
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|669144010|ref|XP_008607567.1| (hypothetical protein SDRG_03707 [Saprolegnia diclina VS20] >gi|530740501|gb|EQC38743.1| hypothetical protein SDRG_03707 [Saprolegnia diclina VS20])

HSP 1 Score: 131.724 bits (330), Expect = 5.342e-37
Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 0
Query:    1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFD-TGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPA 127
            MA+RL   R ++++ RD+  +  FY +EGLGL + R+SD  AEF+   G  L +K A GEA CS GYSP L FDV DMD TI RLL LGA++DGPIKYP +GK+  +RSPDG MIGL+E +   S+ +
Sbjct:    1 MATRL---RQLMILSRDVARSSRFY-EEGLGLQILRQSDTFAEFNVNAGVTLSIKQAHGEAACSAGYSPFLNFDVYDMDETIPRLLMLGAAMDGPIKYPAFGKVAAVRSPDGTMIGLYESNTMESATS 124          
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|971512956|dbj|GAQ85263.1| (hypothetical protein KFL_002260190 [Klebsormidium nitens])

HSP 1 Score: 130.954 bits (328), Expect = 8.155e-37
Identity = 64/117 (54.70%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    5 LANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSI 121
            +A  R ++L+ RD+P A  FY  EGLGL +   SD  AE  +G   L LK  D EA C+TGYSP L FDV D+D T+ RLL LGA LDGPIKYP +GK+  +R PDGHM+GL EP++
Sbjct:    1 MARLRYIMLLQRDVPRAAKFY-SEGLGLTVNVCSDRWAELQSGDMKLALKQVDSEAHCTTGYSPFLHFDVDDLDGTVQRLLSLGAFLDGPIKYPTHGKVAAMRGPDGHMLGLHEPAL 116          
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|813143276|ref|XP_012199583.1| (hypothetical protein SPRG_05474 [Saprolegnia parasitica CBS 223.65] >gi|813200126|ref|XP_012209634.1| hypothetical protein SPRG_14534 [Saprolegnia parasitica CBS 223.65] >gi|641525145|gb|KDO19633.1| hypothetical protein SPRG_14534 [Saprolegnia parasitica CBS 223.65] >gi|641535614|gb|KDO29517.1| hypothetical protein SPRG_05474 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 131.339 bits (329), Expect = 8.362e-37
Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 0
Query:    1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFD-TGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPA 127
            MA+RL   R ++++ RD+  +  FY +EGLGL + R+SD  AEF+   G  L +K A GEA CS GYSP L FDV DMD TI RLL LGA++DGPIKYP +GK+  +RSPDG MIGL+E +   S+ +
Sbjct:    1 MATRL---RQLMILSRDVARSSRFY-EEGLGLQILRQSDTFAEFNVNAGVTLSIKQAHGEAACSAGYSPFLNFDVYDMDETIPRLLMLGAAMDGPIKYPAFGKVAAVRSPDGTMIGLYESNTMDSATS 124          
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|1173940989|gb|OQR90255.1| (hypothetical protein ACHHYP_05676 [Achlya hypogyna])

HSP 1 Score: 129.798 bits (325), Expect = 2.634e-36
Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 0
Query:    1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTG-GTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPA 127
            MA+RL   R ++++ RD+  +  FY +EGLGL L R+SD  AEFD   G  L +K A GEA CS GYSP L FDV DMD TI RL+ LGA++DGPIKYP +GK+  +RSPDG MIGL+E +   ++ +
Sbjct:    1 MATRL---RQLLVLSRDVARSSRFY-EEGLGLRLVRQSDSFAEFDVNCGVTLSIKQAHGEAACSAGYSPFLNFDVHDMDETIPRLIMLGAAMDGPIKYPAFGKVAAVRSPDGTMIGLYESNTMDTATS 124          
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|695427710|ref|XP_009529767.1| (hypothetical protein PHYSODRAFT_508215 [Phytophthora sojae] >gi|348676200|gb|EGZ16018.1| hypothetical protein PHYSODRAFT_508215 [Phytophthora sojae])

HSP 1 Score: 129.413 bits (324), Expect = 4.712e-36
Identity = 63/117 (53.85%), Postives = 84/117 (71.79%), Query Frame = 0
Query:    5 LANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDT-GGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPS 120
            ++  R ++++ RDL  +  FY +EGLGL L R SD  AEFDT  G PL +K+A  EA CS+GYSP L FD++D+   + RLL LGA +DGPIKYP +GK+  +RSPDG MIGL+EP+
Sbjct:    1 MSRLRQLMVLSRDLARSKQFY-QEGLGLKLLRSSDTFAEFDTQAGVPLCIKLAQSEAACSSGYSPFLNFDILDLSDAVPRLLMLGAIMDGPIKYPAHGKVAALRSPDGVMIGLYEPN 116          
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|301105455|ref|XP_002901811.1| (hypothetical protein PITG_11022 [Phytophthora infestans T30-4] >gi|262099149|gb|EEY57201.1| hypothetical protein PITG_11022 [Phytophthora infestans T30-4])

HSP 1 Score: 128.257 bits (321), Expect = 1.330e-35
Identity = 63/117 (53.85%), Postives = 83/117 (70.94%), Query Frame = 0
Query:    5 LANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDT-GGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPS 120
            ++  R ++++ RDL  +  FY +EGLGL L R SD  AEFDT  G PL +K+A  EA CS+GYSP L FD+ D+   + RLL LGA +DGPIKYP +GK+  +RSPDG MIGL+EP+
Sbjct:    1 MSRLRQLMVLSRDLARSKQFY-QEGLGLKLLRSSDTYAEFDTQAGVPLCIKLAQSEAACSSGYSPFLNFDIPDLSDAVPRLLMLGAIMDGPIKYPAHGKVAALRSPDGVMIGLYEPN 116          
BLAST of EWM25524.1 vs. NCBI_GenBank
Match: gi|673020440|ref|XP_008864181.1| (hypothetical protein H310_02450 [Aphanomyces invadans] >gi|574481095|gb|ETW08088.1| hypothetical protein H310_02450 [Aphanomyces invadans])

HSP 1 Score: 126.716 bits (317), Expect = 4.269e-35
Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 0
Query:    1 MASRLANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFD-TGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQPSSPA 127
            MA+RL   R ++++ RD+  +  FY ++GLGL L R+SD  +EFD   G  L +K A GEA CS GYSP L FDV DM  TI RL+ LGA++DGPIKYP +GK+  +RSPDG MIGL+E +   S+ +
Sbjct:    1 MAARL---RQLMVLSRDVAKSTQFY-QDGLGLHLIRQSDSFSEFDMQAGVTLSIKQAHGEAACSAGYSPFLNFDVDDMMETIPRLISLGAAMDGPIKYPAFGKVAAVRSPDGTMIGLYESNTMESATS 124          
The following BLAST results are available for this feature:
BLAST of EWM25524.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107290|gb|EWM25524.1|8.157e-95100.00hypothetical protein Naga_100032g34 [Nannochlorops... [more]
gi|291001755|ref|XP_002683444.1|1.031e-4050.83predicted protein [Naegleria gruberi] >gi|28409707... [more]
gi|1173956601|gb|OQS03352.1|1.072e-3754.69hypothetical protein THRCLA_21185 [Thraustotheca c... [more]
gi|669144010|ref|XP_008607567.1|5.342e-3753.13hypothetical protein SDRG_03707 [Saprolegnia dicli... [more]
gi|971512956|dbj|GAQ85263.1|8.155e-3754.70hypothetical protein KFL_002260190 [Klebsormidium ... [more]
gi|813143276|ref|XP_012199583.1|8.362e-3753.13hypothetical protein SPRG_05474 [Saprolegnia paras... [more]
gi|1173940989|gb|OQR90255.1|2.634e-3653.13hypothetical protein ACHHYP_05676 [Achlya hypogyna... [more]
gi|695427710|ref|XP_009529767.1|4.712e-3653.85hypothetical protein PHYSODRAFT_508215 [Phytophtho... [more]
gi|301105455|ref|XP_002901811.1|1.330e-3553.85hypothetical protein PITG_11022 [Phytophthora infe... [more]
gi|673020440|ref|XP_008864181.1|4.269e-3551.56hypothetical protein H310_02450 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5180rna5180Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications